RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PRG4Q92954 1404 aaPredicted RBP33.54■■■□□ 2.96
CD55-209ENST00000488171 JPH4Q96JJ6 628 aa33.54■■■□□ 2.96
CD55-209ENST00000488171 KIAA0586Q9BVV6 1533 aa33.42■■■□□ 2.94
CD55-209ENST00000488171 CARMIL1Q5VZK9 1371 aa33.4■■■□□ 2.94
CD55-209ENST00000488171 IQGAP2Q13576 1575 aa33.15■■■□□ 2.9
CD55-209ENST00000488171 ADCY10Q96PN6 1610 aa33.15■■■□□ 2.9
CD55-209ENST00000488171 RAPGEF2Q9Y4G8 1499 aa33.14■■■□□ 2.9
CD55-209ENST00000488171 KIF13AQ9H1H9 1805 aa33.09■■■□□ 2.89
CD55-209ENST00000488171 CARMIL2Q6F5E8 1435 aa33.05■■■□□ 2.88
CD55-209ENST00000488171 MAPKBP1O60336 1514 aa33.04■■■□□ 2.88
CD55-209ENST00000488171 NPM1P06748 294 aaKnown RBP eCLIP33.04■■■□□ 2.88
CD55-209ENST00000488171 PTPRGP23470 1445 aa33.04■■■□□ 2.88
CD55-209ENST00000488171 TNIKQ9UKE5 1360 aa33.01■■■□□ 2.87
CD55-209ENST00000488171 DISP1Q96F81 1524 aa32.99■■■□□ 2.87
CD55-209ENST00000488171 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
CD55-209ENST00000488171 UGGT2Q9NYU1 1516 aa32.96■■■□□ 2.87
CD55-209ENST00000488171 TTBK1Q5TCY1 1321 aaPredicted RBP32.94■■■□□ 2.86
CD55-209ENST00000488171 DIP2BQ9P265 1576 aa32.91■■■□□ 2.86
CD55-209ENST00000488171 FAM69CQ0P6D2 419 aa32.9■■■□□ 2.86
CD55-209ENST00000488171 PRXQ9BXM0 1461 aa32.89■■■□□ 2.86
CD55-209ENST00000488171 CTTNBP2Q8WZ74 1663 aa32.87■■■□□ 2.85
CD55-209ENST00000488171 KIAA0556O60303 1618 aa32.85■■■□□ 2.85
CD55-209ENST00000488171 ABCC2Q92887 1545 aa32.85■■■□□ 2.85
CD55-209ENST00000488171 UHRF1BP1LA0JNW5 1464 aa32.83■■■□□ 2.85
CD55-209ENST00000488171 UACAQ9BZF9 1416 aa32.81■■■□□ 2.84
CD55-209ENST00000488171 ASXL2Q76L83 1435 aa32.71■■■□□ 2.83
CD55-209ENST00000488171 KDM5BQ9UGL1 1544 aa32.69■■■□□ 2.82
CD55-209ENST00000488171 GOLGA3Q08378 1498 aa32.68■■■□□ 2.82
CD55-209ENST00000488171 PLB1Q6P1J6 1458 aa32.67■■■□□ 2.82
CD55-209ENST00000488171 CSRNP3Q8WYN3 585 aa32.66■■■□□ 2.82
CD55-209ENST00000488171 TSPOAP1O95153 1857 aa32.64■■■□□ 2.82
CD55-209ENST00000488171 ZCCHC11Q5TAX3 1644 aaKnown RBP32.62■■■□□ 2.81
CD55-209ENST00000488171 GLI2P10070 1586 aa32.6■■■□□ 2.81
CD55-209ENST00000488171 EEA1Q15075 1411 aa32.57■■■□□ 2.8
CD55-209ENST00000488171 ABCA8O94911 1581 aa32.54■■■□□ 2.8
CD55-209ENST00000488171 KDM6BO15054 1643 aa32.53■■■□□ 2.8
CD55-209ENST00000488171 EPRSP07814 1512 aaKnown RBP32.51■■■□□ 2.8
CD55-209ENST00000488171 PPRC1Q5VV67 1664 aaKnown RBP32.51■■■□□ 2.79
CD55-209ENST00000488171 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.78
CD55-209ENST00000488171 MAP3K4Q9Y6R4 1608 aa32.44■■■□□ 2.78
CD55-209ENST00000488171 WDR7Q9Y4E6 1490 aa32.43■■■□□ 2.78
CD55-209ENST00000488171 SAMD9Q5K651 1589 aa32.43■■■□□ 2.78
CD55-209ENST00000488171 P3H3Q8IVL6 736 aa32.42■■■□□ 2.78
CD55-209ENST00000488171 FAM9AQ8IZU1 332 aaPredicted RBP32.41■■■□□ 2.78
CD55-209ENST00000488171 KIF21BO75037 1637 aa32.33■■■□□ 2.77
CD55-209ENST00000488171 CHIC1Q5VXU3 224 aa32.32■■■□□ 2.76
CD55-209ENST00000488171 TEX14Q8IWB6 1497 aa32.29■■■□□ 2.76
CD55-209ENST00000488171 ATP10BO94823 1461 aa32.26■■■□□ 2.76
CD55-209ENST00000488171 COL17A1Q9UMD9 1497 aaPredicted RBP32.25■■■□□ 2.75
CD55-209ENST00000488171 ARID3CA6NKF2 412 aa32.23■■■□□ 2.75
CD55-209ENST00000488171 KCNH8Q96L42 1107 aa32.23■■■□□ 2.75
CD55-209ENST00000488171 RAPGEF6Q8TEU7 1601 aa32.23■■■□□ 2.75
CD55-209ENST00000488171 CFAP43Q8NDM7 1665 aa32.23■■■□□ 2.75
CD55-209ENST00000488171 RANGAP1P46060 587 aaPredicted RBP32.22■■■□□ 2.75
CD55-209ENST00000488171 FHOD3Q2V2M9 1422 aa32.2■■■□□ 2.75
CD55-209ENST00000488171 CD109Q6YHK3 1445 aa32.19■■■□□ 2.74
CD55-209ENST00000488171 MAGI3Q5TCQ9 1506 aa32.17■■■□□ 2.74
CD55-209ENST00000488171 EFCAB5A4FU69 1503 aa32.13■■■□□ 2.73
CD55-209ENST00000488171 NUP153P49790 1475 aaKnown RBP32.13■■■□□ 2.73
CD55-209ENST00000488171 KDM4FA0A1W2PPD8 638 aa32.09■■■□□ 2.73
CD55-209ENST00000488171 EHMT2Q96KQ7 1210 aa32.06■■■□□ 2.72
CD55-209ENST00000488171 ABCA9Q8IUA7 1624 aa32.04■■■□□ 2.72
CD55-209ENST00000488171 UBTFP17480 764 aaKnown RBP32.02■■■□□ 2.72
CD55-209ENST00000488171 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.01■■■□□ 2.71
CD55-209ENST00000488171 HNRNPUL2Q1KMD3 747 aaKnown RBP32.01■■■□□ 2.71
CD55-209ENST00000488171 ARAP3Q8WWN8 1544 aa31.93■■■□□ 2.7
CD55-209ENST00000488171 ADGRL1O94910 1474 aa31.9■■■□□ 2.7
CD55-209ENST00000488171 ARHGAP35Q9NRY4 1499 aa31.9■■■□□ 2.7
CD55-209ENST00000488171 PLEKHD1A6NEE1 506 aa31.87■■■□□ 2.69
CD55-209ENST00000488171 PHLDB1Q86UU1 1377 aa31.85■■■□□ 2.69
CD55-209ENST00000488171 CDK13Q14004 1512 aaKnown RBP31.84■■■□□ 2.69
CD55-209ENST00000488171 NEO1Q92859 1461 aa31.83■■■□□ 2.69
CD55-209ENST00000488171 FMN1Q68DA7 1419 aa31.83■■■□□ 2.69
CD55-209ENST00000488171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.79■■■□□ 2.687e-8■■■□□ 15.9
CD55-209ENST00000488171 HECW1Q76N89 1606 aa31.76■■■□□ 2.68
CD55-209ENST00000488171 TTC37Q6PGP7 1564 aa31.75■■■□□ 2.67
CD55-209ENST00000488171 RAPGEF3O95398 923 aa31.72■■■□□ 2.67
CD55-209ENST00000488171 FRMPD1Q5SYB0 1578 aa31.71■■■□□ 2.67
CD55-209ENST00000488171 ATP1B4Q9UN42 357 aaPredicted RBP31.69■■■□□ 2.66
CD55-209ENST00000488171 FANCAO15360 1455 aa31.66■■■□□ 2.66
CD55-209ENST00000488171 CFAP74Q9C0B2 1584 aa31.65■■■□□ 2.66
CD55-209ENST00000488171 AKNAQ7Z591 1439 aa31.64■■■□□ 2.66
CD55-209ENST00000488171 LRRIQ1Q96JM4 1722 aa31.63■■■□□ 2.65
CD55-209ENST00000488171 DENND4BO75064 1496 aaPredicted RBP31.6■■■□□ 2.65
CD55-209ENST00000488171 RICTORQ6R327 1708 aa31.6■■■□□ 2.65
CD55-209ENST00000488171 CDK11AQ9UQ88 783 aaPredicted RBP31.57■■■□□ 2.64
CD55-209ENST00000488171 PLCH2O75038 1416 aa31.57■■■□□ 2.64
CD55-209ENST00000488171 KIF14Q15058 1648 aa31.55■■■□□ 2.64
CD55-209ENST00000488171 PCF11O94913 1555 aaKnown RBP31.55■■■□□ 2.64
CD55-209ENST00000488171 TROQ12816 1431 aaPredicted RBP31.54■■■□□ 2.64
CD55-209ENST00000488171 CASKIN1Q8WXD9 1431 aa31.54■■■□□ 2.64
CD55-209ENST00000488171 MYO5CQ9NQX4 1742 aa31.51■■■□□ 2.63
CD55-209ENST00000488171 ARHGEF40Q8TER5 1519 aa31.5■■■□□ 2.63
CD55-209ENST00000488171 ZMYM4Q5VZL5 1548 aa31.48■■■□□ 2.63
CD55-209ENST00000488171 CLIP1P30622 1438 aa31.48■■■□□ 2.63
CD55-209ENST00000488171 CCDC18Q5T9S5 1454 aa31.46■■■□□ 2.63
CD55-209ENST00000488171 ADAMTSL3P82987 1691 aa31.46■■■□□ 2.63
CD55-209ENST00000488171 SCAPERQ9BY12 1400 aa31.44■■■□□ 2.62
CD55-209ENST00000488171 FYCO1Q9BQS8 1478 aa31.42■■■□□ 2.62
CD55-209ENST00000488171 BCORL1Q5H9F3 1711 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms