RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
HLA-DQB1-209ENST00000487676 NEFMP07197 916 aa20.55■□□□□ 0.88
HLA-DQB1-209ENST00000487676 EIF4G2P78344 907 aaKnown RBP eCLIP20.53■□□□□ 0.88
HLA-DQB1-209ENST00000487676 DDRGK1Q96HY6 314 aa20.52■□□□□ 0.88
HLA-DQB1-209ENST00000487676 P3H3Q8IVL6 736 aa20.5■□□□□ 0.87
HLA-DQB1-209ENST00000487676 ABCC8Q09428 1581 aa20.49■□□□□ 0.87
HLA-DQB1-209ENST00000487676 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
HLA-DQB1-209ENST00000487676 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
HLA-DQB1-209ENST00000487676 PRKCSHP14314 528 aaPredicted RBP20.48■□□□□ 0.87
HLA-DQB1-209ENST00000487676 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
HLA-DQB1-209ENST00000487676 TMC1Q8TDI8 760 aa20.45■□□□□ 0.86
HLA-DQB1-209ENST00000487676 PABPN1Q86U42 306 aaKnown RBP eCLIP20.45■□□□□ 0.86
HLA-DQB1-209ENST00000487676 IPO9Q96P70 1041 aaKnown RBP20.42■□□□□ 0.86
HLA-DQB1-209ENST00000487676 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
HLA-DQB1-209ENST00000487676 KANK4Q5T7N3 995 aaPredicted RBP20.4■□□□□ 0.86
HLA-DQB1-209ENST00000487676 SETD5Q9C0A6 1442 aa20.39■□□□□ 0.85
HLA-DQB1-209ENST00000487676 RAB3GAP2Q9H2M9 1393 aa20.39■□□□□ 0.85
HLA-DQB1-209ENST00000487676 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.36■□□□□ 0.85
HLA-DQB1-209ENST00000487676 PPP1R15AO75807 674 aaPredicted RBP20.35■□□□□ 0.85
HLA-DQB1-209ENST00000487676 SALL2Q9Y467 1007 aaPredicted RBP20.31■□□□□ 0.84
HLA-DQB1-209ENST00000487676 MSH5O43196 834 aa20.28■□□□□ 0.84
HLA-DQB1-209ENST00000487676 USP35Q9P2H5 1018 aa20.28■□□□□ 0.84
HLA-DQB1-209ENST00000487676 WIZO95785 1651 aa20.26■□□□□ 0.83
HLA-DQB1-209ENST00000487676 RUSC2Q8N2Y8 1516 aa20.25■□□□□ 0.83
HLA-DQB1-209ENST00000487676 ANO8Q9HCE9 1232 aaPredicted RBP20.25■□□□□ 0.83
HLA-DQB1-209ENST00000487676 NACADO15069 1562 aa20.24■□□□□ 0.83
HLA-DQB1-209ENST00000487676 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
HLA-DQB1-209ENST00000487676 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
HLA-DQB1-209ENST00000487676 MTUS2Q5JR59 1369 aa20.2■□□□□ 0.82
HLA-DQB1-209ENST00000487676 TCERG1O14776 1098 aaKnown RBP20.2■□□□□ 0.82
HLA-DQB1-209ENST00000487676 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
HLA-DQB1-209ENST00000487676 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
HLA-DQB1-209ENST00000487676 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
HLA-DQB1-209ENST00000487676 HSPA5P11021 654 aaKnown RBP20.18■□□□□ 0.82
HLA-DQB1-209ENST00000487676 ARXQ96QS3 562 aa20.18■□□□□ 0.82
HLA-DQB1-209ENST00000487676 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
HLA-DQB1-209ENST00000487676 BECN1Q14457 450 aa20.15■□□□□ 0.82
HLA-DQB1-209ENST00000487676 ANP32BQ92688 251 aaKnown RBP20.15■□□□□ 0.82
HLA-DQB1-209ENST00000487676 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
HLA-DQB1-209ENST00000487676 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
HLA-DQB1-209ENST00000487676 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
HLA-DQB1-209ENST00000487676 RAPGEF2Q9Y4G8 1499 aa20.12■□□□□ 0.81
HLA-DQB1-209ENST00000487676 NUDCQ9Y266 331 aa20.12■□□□□ 0.81
HLA-DQB1-209ENST00000487676 NAP1L5Q96NT1 182 aaPredicted RBP20.12■□□□□ 0.81
HLA-DQB1-209ENST00000487676 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
HLA-DQB1-209ENST00000487676 RSPH6AQ9H0K4 717 aa20.06■□□□□ 0.8
HLA-DQB1-209ENST00000487676 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
HLA-DQB1-209ENST00000487676 PAK3O75914 559 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB1-209ENST00000487676 GSE1Q14687 1217 aa20.04■□□□□ 0.8
HLA-DQB1-209ENST00000487676 L1TD1Q5T7N2 865 aaKnown RBP20.03■□□□□ 0.8
HLA-DQB1-209ENST00000487676 IL27Q8NEV9 243 aa20.02■□□□□ 0.8
HLA-DQB1-209ENST00000487676 TRIM44Q96DX7 344 aaPredicted RBP20.02■□□□□ 0.8
HLA-DQB1-209ENST00000487676 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
HLA-DQB1-209ENST00000487676 PRKRIP1Q9H875 184 aaPredicted RBP19.99■□□□□ 0.79
HLA-DQB1-209ENST00000487676 PDE4AP27815 886 aa19.99■□□□□ 0.79
HLA-DQB1-209ENST00000487676 KIF21BO75037 1637 aa19.97■□□□□ 0.79
HLA-DQB1-209ENST00000487676 HSP90AA1P07900 732 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-209ENST00000487676 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
HLA-DQB1-209ENST00000487676 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
HLA-DQB1-209ENST00000487676 ARHGAP35Q9NRY4 1499 aa19.95■□□□□ 0.79
HLA-DQB1-209ENST00000487676 RRBP1Q9P2E9 1410 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB1-209ENST00000487676 RGS3P49796 1198 aa19.94■□□□□ 0.78
HLA-DQB1-209ENST00000487676 ARID3CA6NKF2 412 aa19.94■□□□□ 0.78
HLA-DQB1-209ENST00000487676 PNNQ9H307 717 aaKnown RBP19.91■□□□□ 0.78
HLA-DQB1-209ENST00000487676 MS4A1P11836 297 aa19.91■□□□□ 0.78
HLA-DQB1-209ENST00000487676 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
HLA-DQB1-209ENST00000487676 ZNF777Q9ULD5 760 aaPredicted RBP19.85■□□□□ 0.77
HLA-DQB1-209ENST00000487676 CARD11Q9BXL7 1154 aa19.84■□□□□ 0.77
HLA-DQB1-209ENST00000487676 FMN1Q68DA7 1419 aa19.83■□□□□ 0.76
HLA-DQB1-209ENST00000487676 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
HLA-DQB1-209ENST00000487676 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
HLA-DQB1-209ENST00000487676 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
HLA-DQB1-209ENST00000487676 EXOC6Q8TAG9 804 aa19.8■□□□□ 0.76
HLA-DQB1-209ENST00000487676 BRPF3Q9ULD4 1205 aa19.8■□□□□ 0.76
HLA-DQB1-209ENST00000487676 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
HLA-DQB1-209ENST00000487676 RRP1P56182 461 aaKnown RBP19.8■□□□□ 0.76
HLA-DQB1-209ENST00000487676 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
HLA-DQB1-209ENST00000487676 HSP90AA2PQ14568 343 aaPredicted RBP19.79■□□□□ 0.76
HLA-DQB1-209ENST00000487676 VSIG10Q8N0Z9 540 aa19.79■□□□□ 0.76
HLA-DQB1-209ENST00000487676 NFKBIBQ15653 356 aa19.79■□□□□ 0.76
HLA-DQB1-209ENST00000487676 CNTLNQ9NXG0 1405 aa19.77■□□□□ 0.76
HLA-DQB1-209ENST00000487676 SLC4A3P48751 1232 aa19.76■□□□□ 0.75
HLA-DQB1-209ENST00000487676 RALBP1Q15311 655 aa19.76■□□□□ 0.75
HLA-DQB1-209ENST00000487676 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
HLA-DQB1-209ENST00000487676 MPHOSPH9Q99550 1183 aa19.75■□□□□ 0.75
HLA-DQB1-209ENST00000487676 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
HLA-DQB1-209ENST00000487676 GOLGA6L3A6NEY3 463 aa19.73■□□□□ 0.75
HLA-DQB1-209ENST00000487676 UBE2Q2Q8WVN8 375 aa19.73■□□□□ 0.75
HLA-DQB1-209ENST00000487676 FRAT1Q92837 279 aaPredicted RBP19.72■□□□□ 0.75
HLA-DQB1-209ENST00000487676 SLKQ9H2G2 1235 aaPredicted RBP19.72■□□□□ 0.75
HLA-DQB1-209ENST00000487676 CCDC18Q5T9S5 1454 aa19.71■□□□□ 0.75
HLA-DQB1-209ENST00000487676 SMARCA4P51532 1647 aa19.71■□□□□ 0.75
HLA-DQB1-209ENST00000487676 CCDC7Q96M83 1385 aa19.71■□□□□ 0.75
HLA-DQB1-209ENST00000487676 FAM161AQ3B820 660 aa19.71■□□□□ 0.75
HLA-DQB1-209ENST00000487676 CUX2O14529 1486 aa19.7■□□□□ 0.74
HLA-DQB1-209ENST00000487676 TNNT2P45379 298 aaPredicted RBP19.69■□□□□ 0.74
HLA-DQB1-209ENST00000487676 FOXD1Q16676 465 aa19.69■□□□□ 0.74
HLA-DQB1-209ENST00000487676 PKNOX2Q96KN3 472 aa19.69■□□□□ 0.74
HLA-DQB1-209ENST00000487676 FAM43AQ8N2R8 423 aa19.68■□□□□ 0.74
HLA-DQB1-209ENST00000487676 ROCK2O75116 1388 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms