RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
SREBF1-215ENST00000487401 KIAA0586Q9BVV6 1533 aa21.37■■□□□ 1.01
SREBF1-215ENST00000487401 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
SREBF1-215ENST00000487401 RUSC2Q8N2Y8 1516 aa21.33■■□□□ 1
SREBF1-215ENST00000487401 CUL7Q14999 1698 aa21.31■■□□□ 1
SREBF1-215ENST00000487401 TTBK1Q5TCY1 1321 aaPredicted RBP21.25■□□□□ 0.99
SREBF1-215ENST00000487401 PTPRGP23470 1445 aa21.22■□□□□ 0.99
SREBF1-215ENST00000487401 CARMIL2Q6F5E8 1435 aa21.21■□□□□ 0.99
SREBF1-215ENST00000487401 FAM69CQ0P6D2 419 aa21.2■□□□□ 0.98
SREBF1-215ENST00000487401 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
SREBF1-215ENST00000487401 TNIKQ9UKE5 1360 aa21.17■□□□□ 0.98
SREBF1-215ENST00000487401 ABCC10Q5T3U5 1492 aa21.11■□□□□ 0.97
SREBF1-215ENST00000487401 IQGAP2Q13576 1575 aa21.1■□□□□ 0.97
SREBF1-215ENST00000487401 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
SREBF1-215ENST00000487401 ADCY10Q96PN6 1610 aa21.08■□□□□ 0.97
SREBF1-215ENST00000487401 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-215ENST00000487401 DISP1Q96F81 1524 aa21.04■□□□□ 0.96
SREBF1-215ENST00000487401 UACAQ9BZF9 1416 aa21.03■□□□□ 0.96
SREBF1-215ENST00000487401 ABCC2Q92887 1545 aa21■□□□□ 0.95
SREBF1-215ENST00000487401 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
SREBF1-215ENST00000487401 UHRF1BP1LA0JNW5 1464 aa20.98■□□□□ 0.95
SREBF1-215ENST00000487401 PRXQ9BXM0 1461 aa20.97■□□□□ 0.95
SREBF1-215ENST00000487401 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
SREBF1-215ENST00000487401 ASXL2Q76L83 1435 aa20.95■□□□□ 0.95
SREBF1-215ENST00000487401 DIP2BQ9P265 1576 aa20.95■□□□□ 0.94
SREBF1-215ENST00000487401 PLB1Q6P1J6 1458 aa20.94■□□□□ 0.94
SREBF1-215ENST00000487401 KIF13AQ9H1H9 1805 aa20.93■□□□□ 0.94
SREBF1-215ENST00000487401 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
SREBF1-215ENST00000487401 GOLGA3Q08378 1498 aa20.92■□□□□ 0.94
SREBF1-215ENST00000487401 KIAA0556O60303 1618 aa20.89■□□□□ 0.93
SREBF1-215ENST00000487401 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
SREBF1-215ENST00000487401 P3H3Q8IVL6 736 aa20.84■□□□□ 0.93
SREBF1-215ENST00000487401 EEA1Q15075 1411 aa20.81■□□□□ 0.92
SREBF1-215ENST00000487401 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
SREBF1-215ENST00000487401 GLI2P10070 1586 aa20.79■□□□□ 0.92
SREBF1-215ENST00000487401 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
SREBF1-215ENST00000487401 KDM6BO15054 1643 aa20.76■□□□□ 0.91
SREBF1-215ENST00000487401 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
SREBF1-215ENST00000487401 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
SREBF1-215ENST00000487401 WDR7Q9Y4E6 1490 aa20.75■□□□□ 0.91
SREBF1-215ENST00000487401 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
SREBF1-215ENST00000487401 ZCCHC11Q5TAX3 1644 aaKnown RBP20.72■□□□□ 0.91
SREBF1-215ENST00000487401 ABCA8O94911 1581 aa20.71■□□□□ 0.91
SREBF1-215ENST00000487401 TSPOAP1O95153 1857 aa20.7■□□□□ 0.9
SREBF1-215ENST00000487401 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
SREBF1-215ENST00000487401 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
SREBF1-215ENST00000487401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
SREBF1-215ENST00000487401 HNRNPUL2Q1KMD3 747 aaKnown RBP20.66■□□□□ 0.9
SREBF1-215ENST00000487401 CD109Q6YHK3 1445 aa20.66■□□□□ 0.9
SREBF1-215ENST00000487401 KDM4FA0A1W2PPD8 638 aa20.64■□□□□ 0.89
SREBF1-215ENST00000487401 ATP10BO94823 1461 aa20.62■□□□□ 0.89
SREBF1-215ENST00000487401 COL17A1Q9UMD9 1497 aaPredicted RBP20.62■□□□□ 0.89
SREBF1-215ENST00000487401 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
SREBF1-215ENST00000487401 MAP3K4Q9Y6R4 1608 aa20.6■□□□□ 0.89
SREBF1-215ENST00000487401 UBTFP17480 764 aaKnown RBP20.6■□□□□ 0.89
SREBF1-215ENST00000487401 PPRC1Q5VV67 1664 aaKnown RBP20.59■□□□□ 0.89
SREBF1-215ENST00000487401 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
SREBF1-215ENST00000487401 MAGI3Q5TCQ9 1506 aa20.58■□□□□ 0.88
SREBF1-215ENST00000487401 SAMD9Q5K651 1589 aa20.57■□□□□ 0.88
SREBF1-215ENST00000487401 PLEKHD1A6NEE1 506 aa20.53■□□□□ 0.88
SREBF1-215ENST00000487401 KIF21BO75037 1637 aa20.5■□□□□ 0.87
SREBF1-215ENST00000487401 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
SREBF1-215ENST00000487401 RAPGEF6Q8TEU7 1601 aa20.49■□□□□ 0.87
SREBF1-215ENST00000487401 CFAP43Q8NDM7 1665 aa20.47■□□□□ 0.87
SREBF1-215ENST00000487401 PHLDB1Q86UU1 1377 aa20.46■□□□□ 0.87
SREBF1-215ENST00000487401 EFCAB5A4FU69 1503 aa20.46■□□□□ 0.87
SREBF1-215ENST00000487401 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
SREBF1-215ENST00000487401 ADGRL1O94910 1474 aa20.43■□□□□ 0.86
SREBF1-215ENST00000487401 RAPGEF3O95398 923 aa20.4■□□□□ 0.86
SREBF1-215ENST00000487401 ARAP3Q8WWN8 1544 aa20.4■□□□□ 0.86
SREBF1-215ENST00000487401 ABCA9Q8IUA7 1624 aa20.37■□□□□ 0.85
SREBF1-215ENST00000487401 NEO1Q92859 1461 aa20.37■□□□□ 0.85
SREBF1-215ENST00000487401 FMN1Q68DA7 1419 aa20.36■□□□□ 0.85
SREBF1-215ENST00000487401 CDK11AQ9UQ88 783 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-215ENST00000487401 ARHGAP35Q9NRY4 1499 aa20.33■□□□□ 0.85
SREBF1-215ENST00000487401 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
SREBF1-215ENST00000487401 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
SREBF1-215ENST00000487401 ARID4BQ4LE39 1312 aaPredicted RBP20.27■□□□□ 0.83
SREBF1-215ENST00000487401 DENND4BO75064 1496 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-215ENST00000487401 FANCAO15360 1455 aa20.25■□□□□ 0.83
SREBF1-215ENST00000487401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.25■□□□□ 0.83
SREBF1-215ENST00000487401 EFCAB2Q5VUJ9 269 aa20.22■□□□□ 0.83
SREBF1-215ENST00000487401 PLCH2O75038 1416 aa20.21■□□□□ 0.83
SREBF1-215ENST00000487401 HECW1Q76N89 1606 aa20.2■□□□□ 0.82
SREBF1-215ENST00000487401 CLIP1P30622 1438 aa20.18■□□□□ 0.82
SREBF1-215ENST00000487401 TROQ12816 1431 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-215ENST00000487401 SCAPERQ9BY12 1400 aa20.17■□□□□ 0.82
SREBF1-215ENST00000487401 TTC37Q6PGP7 1564 aa20.17■□□□□ 0.82
SREBF1-215ENST00000487401 CASKIN1Q8WXD9 1431 aa20.14■□□□□ 0.81
SREBF1-215ENST00000487401 FRMPD1Q5SYB0 1578 aa20.13■□□□□ 0.81
SREBF1-215ENST00000487401 CFAP74Q9C0B2 1584 aa20.13■□□□□ 0.81
SREBF1-215ENST00000487401 MAGI2Q86UL8 1455 aa20.1■□□□□ 0.81
SREBF1-215ENST00000487401 POGZQ7Z3K3 1410 aa20.09■□□□□ 0.81
SREBF1-215ENST00000487401 PTPRMP28827 1452 aa20.08■□□□□ 0.81
SREBF1-215ENST00000487401 CCDC18Q5T9S5 1454 aa20.08■□□□□ 0.81
SREBF1-215ENST00000487401 MYT1LQ9UL68 1186 aa20.08■□□□□ 0.81
SREBF1-215ENST00000487401 YEATS2Q9ULM3 1422 aa20.08■□□□□ 0.8
SREBF1-215ENST00000487401 ARHGEF40Q8TER5 1519 aa20.07■□□□□ 0.8
SREBF1-215ENST00000487401 KIF14Q15058 1648 aa20.06■□□□□ 0.8
SREBF1-215ENST00000487401 MLECQ14165 292 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms