RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 KIAA0586Q9BVV6 1533 aa38.79■■■■□ 3.8
SRM-205ENST00000487300 JPH4Q96JJ6 628 aa38.77■■■■□ 3.8
SRM-205ENST00000487300 CARMIL1Q5VZK9 1371 aa38.72■■■■□ 3.79
SRM-205ENST00000487300 TRHP20396 242 aaPredicted RBP38.72■■■■□ 3.79
SRM-205ENST00000487300 IQGAP2Q13576 1575 aa38.56■■■■□ 3.76
SRM-205ENST00000487300 ADCY10Q96PN6 1610 aa38.51■■■■□ 3.76
SRM-205ENST00000487300 RAPGEF2Q9Y4G8 1499 aa38.49■■■■□ 3.75
SRM-205ENST00000487300 KIF13AQ9H1H9 1805 aa38.48■■■■□ 3.75
SRM-205ENST00000487300 MAPKBP1O60336 1514 aa38.38■■■■□ 3.74
SRM-205ENST00000487300 CTTNBP2Q8WZ74 1663 aa38.38■■■■□ 3.73
SRM-205ENST00000487300 UGGT2Q9NYU1 1516 aa38.33■■■■□ 3.73
SRM-205ENST00000487300 CARMIL2Q6F5E8 1435 aa38.32■■■■□ 3.73
SRM-205ENST00000487300 DISP1Q96F81 1524 aa38.32■■■■□ 3.72
SRM-205ENST00000487300 PRXQ9BXM0 1461 aa38.27■■■■□ 3.72
SRM-205ENST00000487300 TNIKQ9UKE5 1360 aa38.26■■■■□ 3.72
SRM-205ENST00000487300 PTPRGP23470 1445 aa38.24■■■■□ 3.71
SRM-205ENST00000487300 KIAA0556O60303 1618 aa38.23■■■■□ 3.71
SRM-205ENST00000487300 DIP2BQ9P265 1576 aa38.22■■■■□ 3.71
SRM-205ENST00000487300 ABCC10Q5T3U5 1492 aa38.2■■■■□ 3.71
SRM-205ENST00000487300 UHRF1BP1LA0JNW5 1464 aa38.13■■■■□ 3.69
SRM-205ENST00000487300 ABCC2Q92887 1545 aa38.12■■■■□ 3.69
SRM-205ENST00000487300 NPM1P06748 294 aaKnown RBP eCLIP38.11■■■■□ 3.69
SRM-205ENST00000487300 UACAQ9BZF9 1416 aa38.03■■■■□ 3.68
SRM-205ENST00000487300 GOLGA3Q08378 1498 aa37.97■■■■□ 3.67
SRM-205ENST00000487300 EEA1Q15075 1411 aa37.96■■■■□ 3.67
SRM-205ENST00000487300 KDM5BQ9UGL1 1544 aa37.96■■■■□ 3.67
SRM-205ENST00000487300 FAM69CQ0P6D2 419 aa37.94■■■■□ 3.66
SRM-205ENST00000487300 ZCCHC11Q5TAX3 1644 aaKnown RBP37.93■■■■□ 3.66
SRM-205ENST00000487300 TTBK1Q5TCY1 1321 aaPredicted RBP37.92■■■■□ 3.66
SRM-205ENST00000487300 CSRNP3Q8WYN3 585 aa37.88■■■■□ 3.65
SRM-205ENST00000487300 PLB1Q6P1J6 1458 aa37.88■■■■□ 3.65
SRM-205ENST00000487300 GLI2P10070 1586 aa37.88■■■■□ 3.65
SRM-205ENST00000487300 TSPOAP1O95153 1857 aa37.88■■■■□ 3.65
SRM-205ENST00000487300 ASXL2Q76L83 1435 aa37.87■■■■□ 3.65
SRM-205ENST00000487300 ABCA8O94911 1581 aa37.85■■■■□ 3.65
SRM-205ENST00000487300 SAMD9Q5K651 1589 aa37.81■■■■□ 3.64
SRM-205ENST00000487300 PPRC1Q5VV67 1664 aaKnown RBP37.81■■■■□ 3.64
SRM-205ENST00000487300 KIF21BO75037 1637 aa37.75■■■■□ 3.63
SRM-205ENST00000487300 MAP3K4Q9Y6R4 1608 aa37.72■■■■□ 3.63
SRM-205ENST00000487300 KDM6BO15054 1643 aa37.71■■■■□ 3.63
SRM-205ENST00000487300 EPRSP07814 1512 aaKnown RBP37.71■■■■□ 3.63
SRM-205ENST00000487300 WDR7Q9Y4E6 1490 aa37.63■■■■□ 3.61
SRM-205ENST00000487300 CHIC1Q5VXU3 224 aa37.55■■■■□ 3.6
SRM-205ENST00000487300 RAPGEF6Q8TEU7 1601 aa37.51■■■■□ 3.6
SRM-205ENST00000487300 CFAP43Q8NDM7 1665 aa37.51■■■■□ 3.6
SRM-205ENST00000487300 FAM9AQ8IZU1 332 aaPredicted RBP37.47■■■■□ 3.59
SRM-205ENST00000487300 EFCAB5A4FU69 1503 aa37.46■■■■□ 3.59
SRM-205ENST00000487300 P3H3Q8IVL6 736 aa37.43■■■■□ 3.58
SRM-205ENST00000487300 TEX14Q8IWB6 1497 aa37.43■■■■□ 3.58
SRM-205ENST00000487300 ATP10BO94823 1461 aa37.41■■■■□ 3.58
SRM-205ENST00000487300 FHOD3Q2V2M9 1422 aa37.36■■■■□ 3.57
SRM-205ENST00000487300 MAGI3Q5TCQ9 1506 aa37.35■■■■□ 3.57
SRM-205ENST00000487300 NUP153P49790 1475 aaKnown RBP37.33■■■■□ 3.57
SRM-205ENST00000487300 COL17A1Q9UMD9 1497 aaPredicted RBP37.33■■■■□ 3.57
SRM-205ENST00000487300 ABCA9Q8IUA7 1624 aa37.29■■■■□ 3.56
SRM-205ENST00000487300 CD109Q6YHK3 1445 aa37.27■■■■□ 3.56
SRM-205ENST00000487300 AEBP2Q6ZN18 517 aaPredicted RBP37.2■■■■□ 3.55
SRM-205ENST00000487300 KCNH8Q96L42 1107 aa37.17■■■■□ 3.54
SRM-205ENST00000487300 ARID3CA6NKF2 412 aa37.16■■■■□ 3.54
SRM-205ENST00000487300 RANGAP1P46060 587 aaPredicted RBP37.16■■■■□ 3.54
SRM-205ENST00000487300 ARHGAP35Q9NRY4 1499 aa37.12■■■■□ 3.53
SRM-205ENST00000487300 UBTFP17480 764 aaKnown RBP37.06■■■■□ 3.52
SRM-205ENST00000487300 ARAP3Q8WWN8 1544 aa37.05■■■■□ 3.52
SRM-205ENST00000487300 HECW1Q76N89 1606 aa37.01■■■■□ 3.52
SRM-205ENST00000487300 FMN1Q68DA7 1419 aa37■■■■□ 3.51
SRM-205ENST00000487300 KDM4FA0A1W2PPD8 638 aa36.99■■■■□ 3.51
SRM-205ENST00000487300 CDK13Q14004 1512 aaKnown RBP36.97■■■■□ 3.51
SRM-205ENST00000487300 EHMT2Q96KQ7 1210 aa36.96■■■■□ 3.51
SRM-205ENST00000487300 NEO1Q92859 1461 aa36.95■■■■□ 3.51
SRM-205ENST00000487300 LRRIQ1Q96JM4 1722 aa36.93■■■■□ 3.5
SRM-205ENST00000487300 PHLDB1Q86UU1 1377 aa36.93■■■■□ 3.5
SRM-205ENST00000487300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.93■■■■□ 3.5
SRM-205ENST00000487300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.92■■■■□ 3.5
SRM-205ENST00000487300 HNRNPUL2Q1KMD3 747 aaKnown RBP36.92■■■■□ 3.5
SRM-205ENST00000487300 TTC37Q6PGP7 1564 aa36.91■■■■□ 3.5
SRM-205ENST00000487300 ADGRL1O94910 1474 aa36.9■■■■□ 3.5
SRM-205ENST00000487300 FRMPD1Q5SYB0 1578 aa36.87■■■■□ 3.49
SRM-205ENST00000487300 PLEKHD1A6NEE1 506 aa36.86■■■■□ 3.49
SRM-205ENST00000487300 CFAP74Q9C0B2 1584 aa36.86■■■■□ 3.49
SRM-205ENST00000487300 RICTORQ6R327 1708 aa36.79■■■■□ 3.48
SRM-205ENST00000487300 PCF11O94913 1555 aaKnown RBP36.77■■■■□ 3.48
SRM-205ENST00000487300 FANCAO15360 1455 aa36.73■■■■□ 3.47
SRM-205ENST00000487300 MYO5CQ9NQX4 1742 aa36.73■■■■□ 3.47
SRM-205ENST00000487300 KIF14Q15058 1648 aa36.71■■■■□ 3.47
SRM-205ENST00000487300 CASKIN1Q8WXD9 1431 aa36.68■■■■□ 3.46
SRM-205ENST00000487300 AKNAQ7Z591 1439 aa36.66■■■■□ 3.46
SRM-205ENST00000487300 TROQ12816 1431 aaPredicted RBP36.63■■■■□ 3.45
SRM-205ENST00000487300 ZMYM4Q5VZL5 1548 aa36.63■■■■□ 3.45
SRM-205ENST00000487300 CCDC18Q5T9S5 1454 aa36.62■■■■□ 3.45
SRM-205ENST00000487300 RAPGEF3O95398 923 aa36.62■■■■□ 3.45
SRM-205ENST00000487300 ARHGEF40Q8TER5 1519 aa36.62■■■■□ 3.45
SRM-205ENST00000487300 DENND4BO75064 1496 aaPredicted RBP36.62■■■■□ 3.45
SRM-205ENST00000487300 PLCH2O75038 1416 aa36.61■■■■□ 3.45
SRM-205ENST00000487300 FYCO1Q9BQS8 1478 aa36.61■■■■□ 3.45
SRM-205ENST00000487300 CLIP1P30622 1438 aa36.59■■■■□ 3.45
SRM-205ENST00000487300 ATP1B4Q9UN42 357 aaPredicted RBP36.56■■■■□ 3.44
SRM-205ENST00000487300 CDK11AQ9UQ88 783 aaPredicted RBP36.56■■■■□ 3.44
SRM-205ENST00000487300 ADAMTSL3P82987 1691 aa36.54■■■■□ 3.44
SRM-205ENST00000487300 CDC42BPBQ9Y5S2 1711 aa36.51■■■■□ 3.44
SRM-205ENST00000487300 BCORL1Q5H9F3 1711 aa36.5■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms