RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 FHOD3Q2V2M9 1422 aa34.27■■■■□ 3.08
LRRC1-203ENST00000487251 PBRM1Q86U86 1689 aa34.25■■■■□ 3.07
LRRC1-203ENST00000487251 AQRO60306 1485 aaKnown RBP eCLIP34.22■■■■□ 3.07
LRRC1-203ENST00000487251 PCF11O94913 1555 aaKnown RBP34.22■■■■□ 3.07
LRRC1-203ENST00000487251 TIAM1Q13009 1591 aa34.22■■■■□ 3.07
LRRC1-203ENST00000487251 EFCAB5A4FU69 1503 aa34.17■■■■□ 3.06
LRRC1-203ENST00000487251 PELP1Q8IZL8 1130 aaKnown RBP34.17■■■■□ 3.06
LRRC1-203ENST00000487251 FHAD1B1AJZ9 1412 aa34.15■■■■□ 3.06
LRRC1-203ENST00000487251 WDR62O43379 1518 aa34.14■■■■□ 3.06
LRRC1-203ENST00000487251 ATP1B4Q9UN42 357 aaPredicted RBP34.12■■■■□ 3.05
LRRC1-203ENST00000487251 ZNF608Q9ULD9 1512 aaPredicted RBP34.09■■■■□ 3.05
LRRC1-203ENST00000487251 RRBP1Q9P2E9 1410 aaKnown RBP34.09■■■■□ 3.05
LRRC1-203ENST00000487251 SCAF1Q9H7N4 1312 aaKnown RBP34.09■■■■□ 3.05
LRRC1-203ENST00000487251 MAP3K1Q13233 1512 aa34.09■■■■□ 3.05
LRRC1-203ENST00000487251 CFAP43Q8NDM7 1665 aa34.07■■■■□ 3.04
LRRC1-203ENST00000487251 ERCC6Q03468 1493 aa34.06■■■■□ 3.04
LRRC1-203ENST00000487251 LRRC9Q6ZRR7 1453 aa34.05■■■■□ 3.04
LRRC1-203ENST00000487251 ADAMTS12P58397 1594 aa34.03■■■■□ 3.04
LRRC1-203ENST00000487251 SAMD9Q5K651 1589 aa34.03■■■■□ 3.04
LRRC1-203ENST00000487251 IFT140Q96RY7 1462 aa34.02■■■■□ 3.04
LRRC1-203ENST00000487251 FYCO1Q9BQS8 1478 aa33.99■■■■□ 3.03
LRRC1-203ENST00000487251 GRIN2BQ13224 1484 aa33.98■■■■□ 3.03
LRRC1-203ENST00000487251 CCNB3Q8WWL7 1395 aa33.98■■■■□ 3.03
LRRC1-203ENST00000487251 CASKIN1Q8WXD9 1431 aa33.97■■■■□ 3.03
LRRC1-203ENST00000487251 THOC2Q8NI27 1593 aaKnown RBP33.95■■■■□ 3.03
LRRC1-203ENST00000487251 SNAPC4Q5SXM2 1469 aa33.92■■■■□ 3.02
LRRC1-203ENST00000487251 FMN1Q68DA7 1419 aa33.92■■■■□ 3.02
LRRC1-203ENST00000487251 PHLDB1Q86UU1 1377 aa33.9■■■■□ 3.02
LRRC1-203ENST00000487251 ITGAEP38570 1179 aa33.9■■■■□ 3.02
LRRC1-203ENST00000487251 LRRIQ1Q96JM4 1722 aa33.89■■■■□ 3.01
LRRC1-203ENST00000487251 EIF4G3O43432 1585 aaKnown RBP33.88■■■■□ 3.01
LRRC1-203ENST00000487251 IQGAP2Q13576 1575 aa33.83■■■■□ 3.01
LRRC1-203ENST00000487251 DHX57Q6P158 1386 aaKnown RBP33.71■■■□□ 2.99
LRRC1-203ENST00000487251 FAM50AQ14320 339 aaKnown RBP33.7■■■□□ 2.98
LRRC1-203ENST00000487251 GRIN2AQ12879 1464 aa33.65■■■□□ 2.98
LRRC1-203ENST00000487251 MTUS2Q5JR59 1369 aa33.64■■■□□ 2.98
LRRC1-203ENST00000487251 UGGT2Q9NYU1 1516 aa33.6■■■□□ 2.97
LRRC1-203ENST00000487251 KIAA0586Q9BVV6 1533 aa33.57■■■□□ 2.96
LRRC1-203ENST00000487251 RAB3GAP2Q9H2M9 1393 aa33.55■■■□□ 2.96
LRRC1-203ENST00000487251 MAGI1Q96QZ7 1491 aaPredicted RBP33.55■■■□□ 2.96
LRRC1-203ENST00000487251 MAGI3Q5TCQ9 1506 aa33.54■■■□□ 2.96
LRRC1-203ENST00000487251 HECW1Q76N89 1606 aa33.52■■■□□ 2.96
LRRC1-203ENST00000487251 FBLN2P98095 1184 aa33.51■■■□□ 2.96
LRRC1-203ENST00000487251 DISP1Q96F81 1524 aa33.51■■■□□ 2.95
LRRC1-203ENST00000487251 ARID3CA6NKF2 412 aa33.5■■■□□ 2.95
LRRC1-203ENST00000487251 CHMP7Q8WUX9 453 aaPredicted RBP33.5■■■□□ 2.95
LRRC1-203ENST00000487251 FGD6Q6ZV73 1430 aa33.5■■■□□ 2.95
LRRC1-203ENST00000487251 KIAA0556O60303 1618 aa33.5■■■□□ 2.95
LRRC1-203ENST00000487251 NCOA2Q15596 1464 aa33.5■■■□□ 2.95
LRRC1-203ENST00000487251 CEP170Q5SW79 1584 aa33.49■■■□□ 2.95
LRRC1-203ENST00000487251 SYNJ2O15056 1496 aa33.48■■■□□ 2.95
LRRC1-203ENST00000487251 SUPT6HQ7KZ85 1726 aaKnown RBP33.48■■■□□ 2.95
LRRC1-203ENST00000487251 EHBP1L1Q8N3D4 1523 aa33.48■■■□□ 2.95
LRRC1-203ENST00000487251 CDK13Q14004 1512 aaKnown RBP33.47■■■□□ 2.95
LRRC1-203ENST00000487251 CCDC18Q5T9S5 1454 aa33.46■■■□□ 2.95
LRRC1-203ENST00000487251 SETD5Q9C0A6 1442 aa33.46■■■□□ 2.95
LRRC1-203ENST00000487251 CLSPNQ9HAW4 1339 aa33.45■■■□□ 2.95
LRRC1-203ENST00000487251 EPRSP07814 1512 aaKnown RBP33.45■■■□□ 2.95
LRRC1-203ENST00000487251 ZNF316A6NFI3 1004 aaPredicted RBP33.41■■■□□ 2.94
LRRC1-203ENST00000487251 DIEXFQ68CQ4 756 aaKnown RBP33.39■■■□□ 2.94
LRRC1-203ENST00000487251 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.38■■■□□ 2.93
LRRC1-203ENST00000487251 MYOM3Q5VTT5 1437 aa33.37■■■□□ 2.93
LRRC1-203ENST00000487251 ACIN1Q9UKV3 1341 aaKnown RBP33.35■■■□□ 2.93
LRRC1-203ENST00000487251 ARHGEF11O15085 1522 aa33.33■■■□□ 2.93
LRRC1-203ENST00000487251 NEUROD1Q13562 356 aa33.32■■■□□ 2.92
LRRC1-203ENST00000487251 MAPKBP1O60336 1514 aa33.31■■■□□ 2.92
LRRC1-203ENST00000487251 PTPRKQ15262 1439 aa33.31■■■□□ 2.92
LRRC1-203ENST00000487251 NUP160Q12769 1436 aa33.28■■■□□ 2.92
LRRC1-203ENST00000487251 PTPN23Q9H3S7 1636 aa33.28■■■□□ 2.92
LRRC1-203ENST00000487251 RAPGEF6Q8TEU7 1601 aa33.28■■■□□ 2.92
LRRC1-203ENST00000487251 NUP153P49790 1475 aaKnown RBP33.26■■■□□ 2.91
LRRC1-203ENST00000487251 JPH4Q96JJ6 628 aa33.21■■■□□ 2.91
LRRC1-203ENST00000487251 PLB1Q6P1J6 1458 aa33.17■■■□□ 2.9
LRRC1-203ENST00000487251 CARMIL2Q6F5E8 1435 aa33.1■■■□□ 2.89
LRRC1-203ENST00000487251 TCOF1Q13428 1488 aaKnown RBP33.1■■■□□ 2.89
LRRC1-203ENST00000487251 HFM1A2PYH4 1435 aa33.09■■■□□ 2.89
LRRC1-203ENST00000487251 CHD1O14646 1710 aa33.08■■■□□ 2.89
LRRC1-203ENST00000487251 SIN3AQ96ST3 1273 aa33.07■■■□□ 2.89
LRRC1-203ENST00000487251 NAIPQ13075 1403 aa33.05■■■□□ 2.88
LRRC1-203ENST00000487251 CHIC2Q9UKJ5 165 aa33.05■■■□□ 2.88
LRRC1-203ENST00000487251 GTF3C3Q9Y5Q9 886 aa33.04■■■□□ 2.88
LRRC1-203ENST00000487251 PRG4Q92954 1404 aaPredicted RBP33.01■■■□□ 2.88
LRRC1-203ENST00000487251 MIA2Q96PC5 1412 aa33■■■□□ 2.87
LRRC1-203ENST00000487251 RRP7BPQ9NSQ0 103 aa32.99■■■□□ 2.87
LRRC1-203ENST00000487251 CDK11AQ9UQ88 783 aaPredicted RBP32.96■■■□□ 2.87
LRRC1-203ENST00000487251 KIF14Q15058 1648 aa32.93■■■□□ 2.86
LRRC1-203ENST00000487251 TROQ12816 1431 aaPredicted RBP32.93■■■□□ 2.86
LRRC1-203ENST00000487251 ZNF644Q9H582 1327 aaPredicted RBP32.92■■■□□ 2.86
LRRC1-203ENST00000487251 ABCA8O94911 1581 aa32.92■■■□□ 2.86
LRRC1-203ENST00000487251 GCC2Q8IWJ2 1684 aa32.91■■■□□ 2.86
LRRC1-203ENST00000487251 CENPBP07199 599 aaPredicted RBP32.9■■■□□ 2.86
LRRC1-203ENST00000487251 UACAQ9BZF9 1416 aa32.9■■■□□ 2.86
LRRC1-203ENST00000487251 KDM6BO15054 1643 aa32.9■■■□□ 2.86
LRRC1-203ENST00000487251 MIER1Q8N108 512 aa32.83■■■□□ 2.85
LRRC1-203ENST00000487251 ADCY10Q96PN6 1610 aa32.82■■■□□ 2.85
LRRC1-203ENST00000487251 DAPK1P53355 1430 aa32.81■■■□□ 2.84
LRRC1-203ENST00000487251 DNMT1P26358 1616 aaKnown RBP32.81■■■□□ 2.84
LRRC1-203ENST00000487251 ATP10BO94823 1461 aa32.81■■■□□ 2.84
LRRC1-203ENST00000487251 ABCC5O15440 1437 aa32.78■■■□□ 2.84
LRRC1-203ENST00000487251 ITSN2Q9NZM3 1697 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms