RNA–Protein interactions for RNA: ENST00000487121.1

MCFD2-216, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 627 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-216ENST00000487121 CHIC1Q5VXU3 224 aa25.28■■□□□ 1.64
MCFD2-216ENST00000487121 PRG4Q92954 1404 aaPredicted RBP25.28■■□□□ 1.64
MCFD2-216ENST00000487121 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
MCFD2-216ENST00000487121 KIAA0586Q9BVV6 1533 aa25.23■■□□□ 1.63
MCFD2-216ENST00000487121 EEA1Q15075 1411 aa25.21■■□□□ 1.63
MCFD2-216ENST00000487121 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
MCFD2-216ENST00000487121 TRHP20396 242 aaPredicted RBP25.14■■□□□ 1.62
MCFD2-216ENST00000487121 CSRNP3Q8WYN3 585 aa25.11■■□□□ 1.61
MCFD2-216ENST00000487121 FAM9AQ8IZU1 332 aaPredicted RBP25.1■■□□□ 1.61
MCFD2-216ENST00000487121 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
MCFD2-216ENST00000487121 PRXQ9BXM0 1461 aa25.06■■□□□ 1.6
MCFD2-216ENST00000487121 IQGAP2Q13576 1575 aa25.01■■□□□ 1.59
MCFD2-216ENST00000487121 CARMIL2Q6F5E8 1435 aa24.97■■□□□ 1.59
MCFD2-216ENST00000487121 PTPRGP23470 1445 aa24.96■■□□□ 1.59
MCFD2-216ENST00000487121 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
MCFD2-216ENST00000487121 DISP1Q96F81 1524 aa24.91■■□□□ 1.58
MCFD2-216ENST00000487121 AEBP2Q6ZN18 517 aaPredicted RBP24.91■■□□□ 1.58
MCFD2-216ENST00000487121 NPM1P06748 294 aaKnown RBP eCLIP24.9■■□□□ 1.58
MCFD2-216ENST00000487121 UGGT2Q9NYU1 1516 aa24.89■■□□□ 1.57
MCFD2-216ENST00000487121 CTTNBP2Q8WZ74 1663 aa24.88■■□□□ 1.57
MCFD2-216ENST00000487121 KIF21BO75037 1637 aa24.88■■□□□ 1.57
MCFD2-216ENST00000487121 EHMT2Q96KQ7 1210 aa24.86■■□□□ 1.57
MCFD2-216ENST00000487121 ADCY10Q96PN6 1610 aa24.82■■□□□ 1.56
MCFD2-216ENST00000487121 RANGAP1P46060 587 aaPredicted RBP24.8■■□□□ 1.56
MCFD2-216ENST00000487121 P3H3Q8IVL6 736 aa24.8■■□□□ 1.56
MCFD2-216ENST00000487121 KIAA0556O60303 1618 aa24.78■■□□□ 1.56
MCFD2-216ENST00000487121 UACAQ9BZF9 1416 aa24.75■■□□□ 1.55
MCFD2-216ENST00000487121 GOLGA3Q08378 1498 aa24.74■■□□□ 1.55
MCFD2-216ENST00000487121 FAM69CQ0P6D2 419 aa24.71■■□□□ 1.55
MCFD2-216ENST00000487121 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
MCFD2-216ENST00000487121 ABCC2Q92887 1545 aa24.68■■□□□ 1.54
MCFD2-216ENST00000487121 UHRF1BP1LA0JNW5 1464 aa24.68■■□□□ 1.54
MCFD2-216ENST00000487121 PLB1Q6P1J6 1458 aa24.65■■□□□ 1.54
MCFD2-216ENST00000487121 MAPKBP1O60336 1514 aa24.65■■□□□ 1.54
MCFD2-216ENST00000487121 ABCC10Q5T3U5 1492 aa24.63■■□□□ 1.53
MCFD2-216ENST00000487121 ASXL2Q76L83 1435 aa24.59■■□□□ 1.53
MCFD2-216ENST00000487121 KDM5BQ9UGL1 1544 aa24.57■■□□□ 1.52
MCFD2-216ENST00000487121 ARID3CA6NKF2 412 aa24.57■■□□□ 1.52
MCFD2-216ENST00000487121 ABCA8O94911 1581 aa24.54■■□□□ 1.52
MCFD2-216ENST00000487121 SAMD9Q5K651 1589 aa24.54■■□□□ 1.52
MCFD2-216ENST00000487121 KIF13AQ9H1H9 1805 aa24.54■■□□□ 1.52
MCFD2-216ENST00000487121 FHOD3Q2V2M9 1422 aa24.53■■□□□ 1.52
MCFD2-216ENST00000487121 DIP2BQ9P265 1576 aa24.53■■□□□ 1.52
MCFD2-216ENST00000487121 EFCAB5A4FU69 1503 aa24.52■■□□□ 1.52
MCFD2-216ENST00000487121 ZCCHC11Q5TAX3 1644 aaKnown RBP24.48■■□□□ 1.51
MCFD2-216ENST00000487121 KCNH8Q96L42 1107 aa24.46■■□□□ 1.51
MCFD2-216ENST00000487121 ATP10BO94823 1461 aa24.42■■□□□ 1.5
MCFD2-216ENST00000487121 EPRSP07814 1512 aaKnown RBP24.41■■□□□ 1.5
MCFD2-216ENST00000487121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
MCFD2-216ENST00000487121 HNRNPUL2Q1KMD3 747 aaKnown RBP24.41■■□□□ 1.5
MCFD2-216ENST00000487121 WDR7Q9Y4E6 1490 aa24.39■■□□□ 1.5
MCFD2-216ENST00000487121 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
MCFD2-216ENST00000487121 GLI2P10070 1586 aa24.36■■□□□ 1.49
MCFD2-216ENST00000487121 RAPGEF6Q8TEU7 1601 aa24.35■■□□□ 1.49
MCFD2-216ENST00000487121 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
MCFD2-216ENST00000487121 NUP153P49790 1475 aaKnown RBP24.33■■□□□ 1.49
MCFD2-216ENST00000487121 TSPOAP1O95153 1857 aa24.33■■□□□ 1.49
MCFD2-216ENST00000487121 FMN1Q68DA7 1419 aa24.28■■□□□ 1.48
MCFD2-216ENST00000487121 PLEKHD1A6NEE1 506 aa24.25■■□□□ 1.47
MCFD2-216ENST00000487121 CD109Q6YHK3 1445 aa24.25■■□□□ 1.47
MCFD2-216ENST00000487121 CLIP1P30622 1438 aa24.24■■□□□ 1.47
MCFD2-216ENST00000487121 MAP3K4Q9Y6R4 1608 aa24.22■■□□□ 1.47
MCFD2-216ENST00000487121 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
MCFD2-216ENST00000487121 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
MCFD2-216ENST00000487121 KDM6BO15054 1643 aa24.18■■□□□ 1.46
MCFD2-216ENST00000487121 CDK13Q14004 1512 aaKnown RBP24.17■■□□□ 1.46
MCFD2-216ENST00000487121 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
MCFD2-216ENST00000487121 TEX14Q8IWB6 1497 aa24.16■■□□□ 1.46
MCFD2-216ENST00000487121 COL17A1Q9UMD9 1497 aaPredicted RBP24.16■■□□□ 1.46
MCFD2-216ENST00000487121 MAGI3Q5TCQ9 1506 aa24.13■■□□□ 1.45
MCFD2-216ENST00000487121 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
MCFD2-216ENST00000487121 CFAP43Q8NDM7 1665 aa24.1■■□□□ 1.45
MCFD2-216ENST00000487121 CDK11AQ9UQ88 783 aaPredicted RBP24.07■■□□□ 1.44
MCFD2-216ENST00000487121 CASKIN1Q8WXD9 1431 aa24.07■■□□□ 1.44
MCFD2-216ENST00000487121 ABCA9Q8IUA7 1624 aa24.06■■□□□ 1.44
MCFD2-216ENST00000487121 FYCO1Q9BQS8 1478 aa24.04■■□□□ 1.44
MCFD2-216ENST00000487121 PCF11O94913 1555 aaKnown RBP24.01■■□□□ 1.43
MCFD2-216ENST00000487121 CCDC18Q5T9S5 1454 aa24■■□□□ 1.43
MCFD2-216ENST00000487121 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.437e-9■■■□□ 17.9
MCFD2-216ENST00000487121 RAPGEF3O95398 923 aa23.96■■□□□ 1.43
MCFD2-216ENST00000487121 TROQ12816 1431 aaPredicted RBP23.95■■□□□ 1.42
MCFD2-216ENST00000487121 PHLDB1Q86UU1 1377 aa23.94■■□□□ 1.42
MCFD2-216ENST00000487121 LRRIQ1Q96JM4 1722 aa23.93■■□□□ 1.42
MCFD2-216ENST00000487121 TTC37Q6PGP7 1564 aa23.93■■□□□ 1.42
MCFD2-216ENST00000487121 ARAP3Q8WWN8 1544 aa23.92■■□□□ 1.42
MCFD2-216ENST00000487121 NEO1Q92859 1461 aa23.92■■□□□ 1.42
MCFD2-216ENST00000487121 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
MCFD2-216ENST00000487121 FANCAO15360 1455 aa23.89■■□□□ 1.42
MCFD2-216ENST00000487121 PLCH2O75038 1416 aa23.89■■□□□ 1.41
MCFD2-216ENST00000487121 AKNAQ7Z591 1439 aa23.89■■□□□ 1.41
MCFD2-216ENST00000487121 KDM4FA0A1W2PPD8 638 aa23.88■■□□□ 1.41
MCFD2-216ENST00000487121 KIF14Q15058 1648 aa23.87■■□□□ 1.41
MCFD2-216ENST00000487121 EFCAB2Q5VUJ9 269 aa23.85■■□□□ 1.41
MCFD2-216ENST00000487121 DENND4BO75064 1496 aaPredicted RBP23.81■■□□□ 1.4
MCFD2-216ENST00000487121 SCAPERQ9BY12 1400 aa23.78■■□□□ 1.4
MCFD2-216ENST00000487121 MTUS2Q5JR59 1369 aa23.77■■□□□ 1.4
MCFD2-216ENST00000487121 MAP3K1Q13233 1512 aa23.76■■□□□ 1.39
MCFD2-216ENST00000487121 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
MCFD2-216ENST00000487121 ARHGAP5Q13017 1502 aa23.74■■□□□ 1.39
MCFD2-216ENST00000487121 FRMPD1Q5SYB0 1578 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms