RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 RUSC2Q8N2Y8 1516 aa32.89■■■□□ 2.86
CLIP2-206ENST00000487091 PRG4Q92954 1404 aaPredicted RBP32.89■■■□□ 2.86
CLIP2-206ENST00000487091 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
CLIP2-206ENST00000487091 KIAA0586Q9BVV6 1533 aa32.82■■■□□ 2.85
CLIP2-206ENST00000487091 RAPGEF2Q9Y4G8 1499 aa32.57■■■□□ 2.8
CLIP2-206ENST00000487091 IQGAP2Q13576 1575 aa32.52■■■□□ 2.8
CLIP2-206ENST00000487091 CARMIL2Q6F5E8 1435 aa32.49■■■□□ 2.79
CLIP2-206ENST00000487091 NPM1P06748 294 aaKnown RBP eCLIP32.47■■■□□ 2.79
CLIP2-206ENST00000487091 ADCY10Q96PN6 1610 aa32.44■■■□□ 2.78
CLIP2-206ENST00000487091 PTPRGP23470 1445 aa32.44■■■□□ 2.78
CLIP2-206ENST00000487091 TNIKQ9UKE5 1360 aa32.42■■■□□ 2.78
CLIP2-206ENST00000487091 MAPKBP1O60336 1514 aa32.37■■■□□ 2.77
CLIP2-206ENST00000487091 UGGT2Q9NYU1 1516 aa32.36■■■□□ 2.77
CLIP2-206ENST00000487091 DISP1Q96F81 1524 aa32.35■■■□□ 2.77
CLIP2-206ENST00000487091 KIF13AQ9H1H9 1805 aa32.35■■■□□ 2.77
CLIP2-206ENST00000487091 PRXQ9BXM0 1461 aa32.34■■■□□ 2.77
CLIP2-206ENST00000487091 ABCC10Q5T3U5 1492 aa32.3■■■□□ 2.76
CLIP2-206ENST00000487091 TTBK1Q5TCY1 1321 aaPredicted RBP32.29■■■□□ 2.76
CLIP2-206ENST00000487091 CTTNBP2Q8WZ74 1663 aa32.25■■■□□ 2.75
CLIP2-206ENST00000487091 FAM69CQ0P6D2 419 aa32.25■■■□□ 2.75
CLIP2-206ENST00000487091 UHRF1BP1LA0JNW5 1464 aa32.22■■■□□ 2.75
CLIP2-206ENST00000487091 ABCC2Q92887 1545 aa32.21■■■□□ 2.75
CLIP2-206ENST00000487091 UACAQ9BZF9 1416 aa32.21■■■□□ 2.75
CLIP2-206ENST00000487091 KIAA0556O60303 1618 aa32.21■■■□□ 2.75
CLIP2-206ENST00000487091 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
CLIP2-206ENST00000487091 CSRNP3Q8WYN3 585 aa32.19■■■□□ 2.74
CLIP2-206ENST00000487091 GOLGA3Q08378 1498 aa32.14■■■□□ 2.74
CLIP2-206ENST00000487091 EEA1Q15075 1411 aa32.13■■■□□ 2.73
CLIP2-206ENST00000487091 PLB1Q6P1J6 1458 aa32.07■■■□□ 2.72
CLIP2-206ENST00000487091 KDM5BQ9UGL1 1544 aa32.06■■■□□ 2.72
CLIP2-206ENST00000487091 ASXL2Q76L83 1435 aa32.06■■■□□ 2.72
CLIP2-206ENST00000487091 GLI2P10070 1586 aa31.95■■■□□ 2.71
CLIP2-206ENST00000487091 ZCCHC11Q5TAX3 1644 aaKnown RBP31.95■■■□□ 2.71
CLIP2-206ENST00000487091 TSPOAP1O95153 1857 aa31.94■■■□□ 2.7
CLIP2-206ENST00000487091 ABCA8O94911 1581 aa31.92■■■□□ 2.7
CLIP2-206ENST00000487091 FAM9AQ8IZU1 332 aaPredicted RBP31.89■■■□□ 2.7
CLIP2-206ENST00000487091 CHIC1Q5VXU3 224 aa31.88■■■□□ 2.69
CLIP2-206ENST00000487091 EPRSP07814 1512 aaKnown RBP31.87■■■□□ 2.69
CLIP2-206ENST00000487091 P3H3Q8IVL6 736 aa31.83■■■□□ 2.69
CLIP2-206ENST00000487091 KDM6BO15054 1643 aa31.82■■■□□ 2.69
CLIP2-206ENST00000487091 SAMD9Q5K651 1589 aa31.82■■■□□ 2.68
CLIP2-206ENST00000487091 WDR7Q9Y4E6 1490 aa31.8■■■□□ 2.68
CLIP2-206ENST00000487091 KIF21BO75037 1637 aa31.8■■■□□ 2.68
CLIP2-206ENST00000487091 PPRC1Q5VV67 1664 aaKnown RBP31.78■■■□□ 2.68
CLIP2-206ENST00000487091 MAP3K4Q9Y6R4 1608 aa31.75■■■□□ 2.67
CLIP2-206ENST00000487091 AEBP2Q6ZN18 517 aaPredicted RBP31.73■■■□□ 2.67
CLIP2-206ENST00000487091 TEX14Q8IWB6 1497 aa31.68■■■□□ 2.66
CLIP2-206ENST00000487091 ATP10BO94823 1461 aa31.66■■■□□ 2.66
CLIP2-206ENST00000487091 RANGAP1P46060 587 aaPredicted RBP31.65■■■□□ 2.66
CLIP2-206ENST00000487091 KCNH8Q96L42 1107 aa31.65■■■□□ 2.66
CLIP2-206ENST00000487091 RAPGEF6Q8TEU7 1601 aa31.63■■■□□ 2.65
CLIP2-206ENST00000487091 EFCAB5A4FU69 1503 aa31.6■■■□□ 2.65
CLIP2-206ENST00000487091 FHOD3Q2V2M9 1422 aa31.6■■■□□ 2.65
CLIP2-206ENST00000487091 CD109Q6YHK3 1445 aa31.59■■■□□ 2.65
CLIP2-206ENST00000487091 ARID3CA6NKF2 412 aa31.59■■■□□ 2.65
CLIP2-206ENST00000487091 CFAP43Q8NDM7 1665 aa31.59■■■□□ 2.65
CLIP2-206ENST00000487091 MAGI3Q5TCQ9 1506 aa31.56■■■□□ 2.64
CLIP2-206ENST00000487091 UBTFP17480 764 aaKnown RBP31.56■■■□□ 2.64
CLIP2-206ENST00000487091 COL17A1Q9UMD9 1497 aaPredicted RBP31.55■■■□□ 2.64
CLIP2-206ENST00000487091 NUP153P49790 1475 aaKnown RBP31.52■■■□□ 2.64
CLIP2-206ENST00000487091 EHMT2Q96KQ7 1210 aa31.48■■■□□ 2.63
CLIP2-206ENST00000487091 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.47■■■□□ 2.63
CLIP2-206ENST00000487091 HNRNPUL2Q1KMD3 747 aaKnown RBP31.47■■■□□ 2.63
CLIP2-206ENST00000487091 ABCA9Q8IUA7 1624 aa31.42■■■□□ 2.62
CLIP2-206ENST00000487091 KDM4FA0A1W2PPD8 638 aa31.38■■■□□ 2.61
CLIP2-206ENST00000487091 PLEKHD1A6NEE1 506 aa31.37■■■□□ 2.61
CLIP2-206ENST00000487091 ARHGAP35Q9NRY4 1499 aa31.35■■■□□ 2.61
CLIP2-206ENST00000487091 FMN1Q68DA7 1419 aa31.33■■■□□ 2.61
CLIP2-206ENST00000487091 PHLDB1Q86UU1 1377 aa31.33■■■□□ 2.61
CLIP2-206ENST00000487091 ARAP3Q8WWN8 1544 aa31.31■■■□□ 2.6
CLIP2-206ENST00000487091 NEO1Q92859 1461 aa31.24■■■□□ 2.59
CLIP2-206ENST00000487091 CDK13Q14004 1512 aaKnown RBP31.21■■■□□ 2.59
CLIP2-206ENST00000487091 HECW1Q76N89 1606 aa31.2■■■□□ 2.58
CLIP2-206ENST00000487091 ADGRL1O94910 1474 aa31.19■■■□□ 2.58
CLIP2-206ENST00000487091 ATP1B4Q9UN42 357 aaPredicted RBP31.18■■■□□ 2.58
CLIP2-206ENST00000487091 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.17■■■□□ 2.58
CLIP2-206ENST00000487091 CDK11AQ9UQ88 783 aaPredicted RBP31.13■■■□□ 2.57
CLIP2-206ENST00000487091 RAPGEF3O95398 923 aa31.1■■■□□ 2.57
CLIP2-206ENST00000487091 TTC37Q6PGP7 1564 aa31.09■■■□□ 2.57
CLIP2-206ENST00000487091 FANCAO15360 1455 aa31.07■■■□□ 2.56
CLIP2-206ENST00000487091 AKNAQ7Z591 1439 aa31.06■■■□□ 2.56
CLIP2-206ENST00000487091 CFAP74Q9C0B2 1584 aa31.05■■■□□ 2.56
CLIP2-206ENST00000487091 CASKIN1Q8WXD9 1431 aa31.02■■■□□ 2.56
CLIP2-206ENST00000487091 DENND4BO75064 1496 aaPredicted RBP31.01■■■□□ 2.56
CLIP2-206ENST00000487091 FRMPD1Q5SYB0 1578 aa31.01■■■□□ 2.56
CLIP2-206ENST00000487091 PLCH2O75038 1416 aa31.01■■■□□ 2.55
CLIP2-206ENST00000487091 TROQ12816 1431 aaPredicted RBP31■■■□□ 2.55
CLIP2-206ENST00000487091 CLIP1P30622 1438 aa30.98■■■□□ 2.55
CLIP2-206ENST00000487091 LRRIQ1Q96JM4 1722 aa30.98■■■□□ 2.55
CLIP2-206ENST00000487091 PCF11O94913 1555 aaKnown RBP30.96■■■□□ 2.55
CLIP2-206ENST00000487091 RICTORQ6R327 1708 aa30.95■■■□□ 2.54
CLIP2-206ENST00000487091 CCDC18Q5T9S5 1454 aa30.95■■■□□ 2.54
CLIP2-206ENST00000487091 KIF14Q15058 1648 aa30.94■■■□□ 2.54
CLIP2-206ENST00000487091 MYO5CQ9NQX4 1742 aa30.91■■■□□ 2.54
CLIP2-206ENST00000487091 EFCAB2Q5VUJ9 269 aa30.91■■■□□ 2.54
CLIP2-206ENST00000487091 FYCO1Q9BQS8 1478 aa30.9■■■□□ 2.54
CLIP2-206ENST00000487091 SCAPERQ9BY12 1400 aa30.86■■■□□ 2.53
CLIP2-206ENST00000487091 ZMYM4Q5VZL5 1548 aa30.86■■■□□ 2.53
CLIP2-206ENST00000487091 ARHGEF40Q8TER5 1519 aa30.84■■■□□ 2.53
CLIP2-206ENST00000487091 MAGI2Q86UL8 1455 aa30.82■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms