RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 JPH4Q96JJ6 628 aa37.93■■■■□ 3.66
CDHR3-212ENST00000487084 PRG4Q92954 1404 aaPredicted RBP37.9■■■■□ 3.66
CDHR3-212ENST00000487084 KIAA0586Q9BVV6 1533 aa37.87■■■■□ 3.65
CDHR3-212ENST00000487084 RAPGEF2Q9Y4G8 1499 aa37.8■■■■□ 3.64
CDHR3-212ENST00000487084 IQGAP2Q13576 1575 aa37.64■■■■□ 3.62
CDHR3-212ENST00000487084 TRHP20396 242 aaPredicted RBP37.64■■■■□ 3.62
CDHR3-212ENST00000487084 PRXQ9BXM0 1461 aa37.58■■■■□ 3.61
CDHR3-212ENST00000487084 CHIC1Q5VXU3 224 aa37.54■■■■□ 3.6
CDHR3-212ENST00000487084 CSRNP3Q8WYN3 585 aa37.53■■■■□ 3.6
CDHR3-212ENST00000487084 CARMIL2Q6F5E8 1435 aa37.51■■■■□ 3.59
CDHR3-212ENST00000487084 EEA1Q15075 1411 aa37.49■■■■□ 3.59
CDHR3-212ENST00000487084 TTBK1Q5TCY1 1321 aaPredicted RBP37.48■■■■□ 3.59
CDHR3-212ENST00000487084 FAM9AQ8IZU1 332 aaPredicted RBP37.46■■■■□ 3.59
CDHR3-212ENST00000487084 CTTNBP2Q8WZ74 1663 aa37.41■■■■□ 3.58
CDHR3-212ENST00000487084 PTPRGP23470 1445 aa37.41■■■■□ 3.58
CDHR3-212ENST00000487084 TNIKQ9UKE5 1360 aa37.41■■■■□ 3.58
CDHR3-212ENST00000487084 UGGT2Q9NYU1 1516 aa37.4■■■■□ 3.58
CDHR3-212ENST00000487084 DISP1Q96F81 1524 aa37.38■■■■□ 3.57
CDHR3-212ENST00000487084 ADCY10Q96PN6 1610 aa37.32■■■■□ 3.56
CDHR3-212ENST00000487084 NPM1P06748 294 aaKnown RBP eCLIP37.31■■■■□ 3.56
CDHR3-212ENST00000487084 KIAA0556O60303 1618 aa37.28■■■■□ 3.56
CDHR3-212ENST00000487084 GOLGA3Q08378 1498 aa37.2■■■■□ 3.55
CDHR3-212ENST00000487084 UACAQ9BZF9 1416 aa37.14■■■■□ 3.54
CDHR3-212ENST00000487084 KIF21BO75037 1637 aa37.11■■■■□ 3.53
CDHR3-212ENST00000487084 MAPKBP1O60336 1514 aa37.1■■■■□ 3.53
CDHR3-212ENST00000487084 ABCC2Q92887 1545 aa37.08■■■■□ 3.53
CDHR3-212ENST00000487084 EHMT2Q96KQ7 1210 aa37.07■■■■□ 3.52
CDHR3-212ENST00000487084 UHRF1BP1LA0JNW5 1464 aa37.07■■■■□ 3.52
CDHR3-212ENST00000487084 RANGAP1P46060 587 aaPredicted RBP37.04■■■■□ 3.52
CDHR3-212ENST00000487084 P3H3Q8IVL6 736 aa37.03■■■■□ 3.52
CDHR3-212ENST00000487084 ABCC10Q5T3U5 1492 aa37■■■■□ 3.51
CDHR3-212ENST00000487084 FAM69CQ0P6D2 419 aa36.99■■■■□ 3.51
CDHR3-212ENST00000487084 KIF13AQ9H1H9 1805 aa36.97■■■■□ 3.51
CDHR3-212ENST00000487084 PLB1Q6P1J6 1458 aa36.97■■■■□ 3.51
CDHR3-212ENST00000487084 SAMD9Q5K651 1589 aa36.92■■■■□ 3.5
CDHR3-212ENST00000487084 DIP2BQ9P265 1576 aa36.92■■■■□ 3.5
CDHR3-212ENST00000487084 UBTFP17480 764 aaKnown RBP36.92■■■■□ 3.5
CDHR3-212ENST00000487084 KDM5BQ9UGL1 1544 aa36.9■■■■□ 3.5
CDHR3-212ENST00000487084 ASXL2Q76L83 1435 aa36.9■■■■□ 3.5
CDHR3-212ENST00000487084 ABCA8O94911 1581 aa36.87■■■■□ 3.49
CDHR3-212ENST00000487084 ZCCHC11Q5TAX3 1644 aaKnown RBP36.85■■■■□ 3.49
CDHR3-212ENST00000487084 FHOD3Q2V2M9 1422 aa36.79■■■■□ 3.48
CDHR3-212ENST00000487084 EFCAB5A4FU69 1503 aa36.74■■■■□ 3.47
CDHR3-212ENST00000487084 ARID3CA6NKF2 412 aa36.73■■■■□ 3.47
CDHR3-212ENST00000487084 WDR7Q9Y4E6 1490 aa36.67■■■■□ 3.46
CDHR3-212ENST00000487084 EPRSP07814 1512 aaKnown RBP36.66■■■■□ 3.46
CDHR3-212ENST00000487084 RAPGEF6Q8TEU7 1601 aa36.65■■■■□ 3.46
CDHR3-212ENST00000487084 TSPOAP1O95153 1857 aa36.65■■■■□ 3.46
CDHR3-212ENST00000487084 GLI2P10070 1586 aa36.64■■■■□ 3.46
CDHR3-212ENST00000487084 ATP10BO94823 1461 aa36.58■■■■□ 3.45
CDHR3-212ENST00000487084 KCNH8Q96L42 1107 aa36.56■■■■□ 3.44
CDHR3-212ENST00000487084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.54■■■■□ 3.44
CDHR3-212ENST00000487084 HNRNPUL2Q1KMD3 747 aaKnown RBP36.54■■■■□ 3.44
CDHR3-212ENST00000487084 ARHGAP35Q9NRY4 1499 aa36.53■■■■□ 3.44
CDHR3-212ENST00000487084 NUP153P49790 1475 aaKnown RBP36.52■■■■□ 3.44
CDHR3-212ENST00000487084 MAP3K4Q9Y6R4 1608 aa36.47■■■■□ 3.43
CDHR3-212ENST00000487084 PPRC1Q5VV67 1664 aaKnown RBP36.45■■■■□ 3.42
CDHR3-212ENST00000487084 KDM6BO15054 1643 aa36.43■■■■□ 3.42
CDHR3-212ENST00000487084 FMN1Q68DA7 1419 aa36.42■■■■□ 3.42
CDHR3-212ENST00000487084 ATP1B4Q9UN42 357 aaPredicted RBP36.38■■■■□ 3.41
CDHR3-212ENST00000487084 TEX14Q8IWB6 1497 aa36.37■■■■□ 3.41
CDHR3-212ENST00000487084 CD109Q6YHK3 1445 aa36.36■■■■□ 3.41
CDHR3-212ENST00000487084 CFAP43Q8NDM7 1665 aa36.33■■■■□ 3.41
CDHR3-212ENST00000487084 PLEKHD1A6NEE1 506 aa36.29■■■■□ 3.4
CDHR3-212ENST00000487084 CDK13Q14004 1512 aaKnown RBP36.29■■■■□ 3.4
CDHR3-212ENST00000487084 HECW1Q76N89 1606 aa36.28■■■■□ 3.4
CDHR3-212ENST00000487084 CLIP1P30622 1438 aa36.27■■■■□ 3.4
CDHR3-212ENST00000487084 MAGI3Q5TCQ9 1506 aa36.25■■■■□ 3.39
CDHR3-212ENST00000487084 ABCA9Q8IUA7 1624 aa36.21■■■■□ 3.39
CDHR3-212ENST00000487084 COL17A1Q9UMD9 1497 aaPredicted RBP36.17■■■■□ 3.38
CDHR3-212ENST00000487084 PCF11O94913 1555 aaKnown RBP36.12■■■■□ 3.37
CDHR3-212ENST00000487084 CASKIN1Q8WXD9 1431 aa36.09■■■■□ 3.37
CDHR3-212ENST00000487084 CDK11AQ9UQ88 783 aaPredicted RBP36.08■■■■□ 3.37
CDHR3-212ENST00000487084 LOC105371045A0A1W2PR82 267 aa36.05■■■■□ 3.36
CDHR3-212ENST00000487084 CEP162Q5TB80 1403 aa36.05■■■■□ 3.36
CDHR3-212ENST00000487084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.04■■■■□ 3.36
CDHR3-212ENST00000487084 LRRIQ1Q96JM4 1722 aa36.01■■■■□ 3.36
CDHR3-212ENST00000487084 FYCO1Q9BQS8 1478 aa36■■■■□ 3.35
CDHR3-212ENST00000487084 TTC37Q6PGP7 1564 aa36■■■■□ 3.35
CDHR3-212ENST00000487084 CCDC18Q5T9S5 1454 aa35.99■■■■□ 3.35
CDHR3-212ENST00000487084 NEO1Q92859 1461 aa35.96■■■■□ 3.35
CDHR3-212ENST00000487084 TROQ12816 1431 aaPredicted RBP35.95■■■■□ 3.35
CDHR3-212ENST00000487084 PHLDB1Q86UU1 1377 aa35.95■■■■□ 3.35
CDHR3-212ENST00000487084 ARAP3Q8WWN8 1544 aa35.93■■■■□ 3.34
CDHR3-212ENST00000487084 AEBP2Q6ZN18 517 aaPredicted RBP35.92■■■■□ 3.34
CDHR3-212ENST00000487084 KIF14Q15058 1648 aa35.9■■■■□ 3.34
CDHR3-212ENST00000487084 FANCAO15360 1455 aa35.88■■■■□ 3.33
CDHR3-212ENST00000487084 RAPGEF3O95398 923 aa35.83■■■■□ 3.33
CDHR3-212ENST00000487084 CFAP74Q9C0B2 1584 aa35.83■■■■□ 3.33
CDHR3-212ENST00000487084 AKNAQ7Z591 1439 aa35.83■■■■□ 3.33
CDHR3-212ENST00000487084 PLCH2O75038 1416 aa35.82■■■■□ 3.32
CDHR3-212ENST00000487084 MYO5CQ9NQX4 1742 aa35.77■■■■□ 3.32
CDHR3-212ENST00000487084 DENND4BO75064 1496 aaPredicted RBP35.74■■■■□ 3.31
CDHR3-212ENST00000487084 FRMPD1Q5SYB0 1578 aa35.72■■■■□ 3.31
CDHR3-212ENST00000487084 EFCAB2Q5VUJ9 269 aa35.71■■■■□ 3.31
CDHR3-212ENST00000487084 KDM4FA0A1W2PPD8 638 aa35.7■■■■□ 3.31
CDHR3-212ENST00000487084 ADGRL1O94910 1474 aa35.7■■■■□ 3.31
CDHR3-212ENST00000487084 ARHGAP5Q13017 1502 aa35.7■■■■□ 3.31
CDHR3-212ENST00000487084 MTUS2Q5JR59 1369 aa35.65■■■■□ 3.3
CDHR3-212ENST00000487084 SCAPERQ9BY12 1400 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms