RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 KIF13AQ9H1H9 1805 aa22.41■■□□□ 1.18
NR1H3-223ENST00000486991 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
NR1H3-223ENST00000486991 CUL7Q14999 1698 aa22.39■■□□□ 1.18
NR1H3-223ENST00000486991 IGF1RP08069 1367 aa22.38■■□□□ 1.17
NR1H3-223ENST00000486991 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
NR1H3-223ENST00000486991 ADCY10Q96PN6 1610 aa22.31■■□□□ 1.16
NR1H3-223ENST00000486991 NPM1P06748 294 aaKnown RBP eCLIP22.29■■□□□ 1.16
NR1H3-223ENST00000486991 KIAA0586Q9BVV6 1533 aa22.29■■□□□ 1.16
NR1H3-223ENST00000486991 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
NR1H3-223ENST00000486991 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
NR1H3-223ENST00000486991 MAPKBP1O60336 1514 aa22.22■■□□□ 1.15
NR1H3-223ENST00000486991 DIP2BQ9P265 1576 aa22.21■■□□□ 1.15
NR1H3-223ENST00000486991 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
NR1H3-223ENST00000486991 PTPRGP23470 1445 aa22.15■■□□□ 1.14
NR1H3-223ENST00000486991 TSPOAP1O95153 1857 aa22.13■■□□□ 1.13
NR1H3-223ENST00000486991 TNIKQ9UKE5 1360 aa22.08■■□□□ 1.12
NR1H3-223ENST00000486991 RAPGEF2Q9Y4G8 1499 aa22.08■■□□□ 1.12
NR1H3-223ENST00000486991 IQGAP2Q13576 1575 aa22.07■■□□□ 1.12
NR1H3-223ENST00000486991 KDM6BO15054 1643 aa22.06■■□□□ 1.12
NR1H3-223ENST00000486991 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
NR1H3-223ENST00000486991 ABCC2Q92887 1545 aa22.02■■□□□ 1.12
NR1H3-223ENST00000486991 PRXQ9BXM0 1461 aa22.02■■□□□ 1.12
NR1H3-223ENST00000486991 DISP1Q96F81 1524 aa22.01■■□□□ 1.11
NR1H3-223ENST00000486991 ASXL2Q76L83 1435 aa22■■□□□ 1.11
NR1H3-223ENST00000486991 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
NR1H3-223ENST00000486991 KDM4FA0A1W2PPD8 638 aa21.99■■□□□ 1.11
NR1H3-223ENST00000486991 CHIC1Q5VXU3 224 aa21.98■■□□□ 1.11
NR1H3-223ENST00000486991 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
NR1H3-223ENST00000486991 UGGT2Q9NYU1 1516 aa21.96■■□□□ 1.11
NR1H3-223ENST00000486991 UHRF1BP1LA0JNW5 1464 aa21.94■■□□□ 1.1
NR1H3-223ENST00000486991 PPRC1Q5VV67 1664 aaKnown RBP21.94■■□□□ 1.1
NR1H3-223ENST00000486991 PLB1Q6P1J6 1458 aa21.93■■□□□ 1.1
NR1H3-223ENST00000486991 GLI2P10070 1586 aa21.89■■□□□ 1.09
NR1H3-223ENST00000486991 KIAA0556O60303 1618 aa21.88■■□□□ 1.09
NR1H3-223ENST00000486991 ZCCHC11Q5TAX3 1644 aaKnown RBP21.87■■□□□ 1.09
NR1H3-223ENST00000486991 KDM5BQ9UGL1 1544 aa21.86■■□□□ 1.09
NR1H3-223ENST00000486991 EPRSP07814 1512 aaKnown RBP21.85■■□□□ 1.09
NR1H3-223ENST00000486991 COL17A1Q9UMD9 1497 aaPredicted RBP21.84■■□□□ 1.09
NR1H3-223ENST00000486991 EEA1Q15075 1411 aa21.84■■□□□ 1.09
NR1H3-223ENST00000486991 MAP3K4Q9Y6R4 1608 aa21.8■■□□□ 1.08
NR1H3-223ENST00000486991 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
NR1H3-223ENST00000486991 KIF21BO75037 1637 aa21.74■■□□□ 1.07
NR1H3-223ENST00000486991 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
NR1H3-223ENST00000486991 ADGRL1O94910 1474 aa21.72■■□□□ 1.07
NR1H3-223ENST00000486991 WDR7Q9Y4E6 1490 aa21.72■■□□□ 1.07
NR1H3-223ENST00000486991 GOLGA3Q08378 1498 aa21.71■■□□□ 1.07
NR1H3-223ENST00000486991 ABCA8O94911 1581 aa21.7■■□□□ 1.06
NR1H3-223ENST00000486991 SAMD9Q5K651 1589 aa21.7■■□□□ 1.06
NR1H3-223ENST00000486991 TEX14Q8IWB6 1497 aa21.7■■□□□ 1.06
NR1H3-223ENST00000486991 ARID3CA6NKF2 412 aa21.69■■□□□ 1.06
NR1H3-223ENST00000486991 P3H3Q8IVL6 736 aa21.69■■□□□ 1.06
NR1H3-223ENST00000486991 CD109Q6YHK3 1445 aa21.64■■□□□ 1.06
NR1H3-223ENST00000486991 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
NR1H3-223ENST00000486991 CFAP43Q8NDM7 1665 aa21.59■■□□□ 1.05
NR1H3-223ENST00000486991 MAGI3Q5TCQ9 1506 aa21.58■■□□□ 1.04
NR1H3-223ENST00000486991 ATP10BO94823 1461 aa21.55■■□□□ 1.04
NR1H3-223ENST00000486991 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
NR1H3-223ENST00000486991 EFCAB5A4FU69 1503 aa21.5■■□□□ 1.03
NR1H3-223ENST00000486991 RAPGEF6Q8TEU7 1601 aa21.49■■□□□ 1.03
NR1H3-223ENST00000486991 FHOD3Q2V2M9 1422 aa21.47■■□□□ 1.03
NR1H3-223ENST00000486991 ILDR1Q86SU0 546 aaPredicted RBP21.47■■□□□ 1.03
NR1H3-223ENST00000486991 HECW2Q9P2P5 1572 aa21.47■■□□□ 1.03
NR1H3-223ENST00000486991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.44■■□□□ 1.02
NR1H3-223ENST00000486991 HNRNPUL2Q1KMD3 747 aaKnown RBP21.44■■□□□ 1.02
NR1H3-223ENST00000486991 ARAP3Q8WWN8 1544 aa21.42■■□□□ 1.02
NR1H3-223ENST00000486991 ABCA9Q8IUA7 1624 aa21.41■■□□□ 1.02
NR1H3-223ENST00000486991 NUP153P49790 1475 aaKnown RBP21.41■■□□□ 1.02
NR1H3-223ENST00000486991 RAPGEF3O95398 923 aa21.41■■□□□ 1.02
NR1H3-223ENST00000486991 ARHGAP35Q9NRY4 1499 aa21.37■■□□□ 1.01
NR1H3-223ENST00000486991 EHMT2Q96KQ7 1210 aa21.35■■□□□ 1.01
NR1H3-223ENST00000486991 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
NR1H3-223ENST00000486991 FRMPD1Q5SYB0 1578 aa21.3■■□□□ 1
NR1H3-223ENST00000486991 NEO1Q92859 1461 aa21.29■■□□□ 1
NR1H3-223ENST00000486991 PHLDB1Q86UU1 1377 aa21.29■■□□□ 1
NR1H3-223ENST00000486991 ADAMTSL3P82987 1691 aa21.26■□□□□ 0.99
NR1H3-223ENST00000486991 PLEKHD1A6NEE1 506 aa21.26■□□□□ 0.99
NR1H3-223ENST00000486991 LRRIQ1Q96JM4 1722 aa21.25■□□□□ 0.99
NR1H3-223ENST00000486991 PTPRMP28827 1452 aa21.24■□□□□ 0.99
NR1H3-223ENST00000486991 ARID4BQ4LE39 1312 aaPredicted RBP21.24■□□□□ 0.99
NR1H3-223ENST00000486991 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
NR1H3-223ENST00000486991 HECW1Q76N89 1606 aa21.22■□□□□ 0.99
NR1H3-223ENST00000486991 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
NR1H3-223ENST00000486991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.21■□□□□ 0.99
NR1H3-223ENST00000486991 BCORL1Q5H9F3 1711 aa21.2■□□□□ 0.98
NR1H3-223ENST00000486991 AKNAQ7Z591 1439 aa21.2■□□□□ 0.98
NR1H3-223ENST00000486991 TTC37Q6PGP7 1564 aa21.19■□□□□ 0.98
NR1H3-223ENST00000486991 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
NR1H3-223ENST00000486991 MADDQ8WXG6 1647 aa21.18■□□□□ 0.98
NR1H3-223ENST00000486991 FANCAO15360 1455 aa21.18■□□□□ 0.98
NR1H3-223ENST00000486991 RICTORQ6R327 1708 aa21.18■□□□□ 0.98
NR1H3-223ENST00000486991 PCF11O94913 1555 aaKnown RBP21.17■□□□□ 0.98
NR1H3-223ENST00000486991 ATP1B4Q9UN42 357 aaPredicted RBP21.16■□□□□ 0.98
NR1H3-223ENST00000486991 ARHGEF40Q8TER5 1519 aa21.14■□□□□ 0.98
NR1H3-223ENST00000486991 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
NR1H3-223ENST00000486991 SIGLEC1Q9BZZ2 1709 aa21.12■□□□□ 0.97
NR1H3-223ENST00000486991 YEATS2Q9ULM3 1422 aa21.12■□□□□ 0.97
NR1H3-223ENST00000486991 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
NR1H3-223ENST00000486991 RIMS1Q86UR5 1692 aaKnown RBP21.11■□□□□ 0.97
NR1H3-223ENST00000486991 CLIP1P30622 1438 aa21.1■□□□□ 0.97
NR1H3-223ENST00000486991 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms