RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
APTX-228ENST00000486724 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
APTX-228ENST00000486724 ADAMTS12P58397 1594 aa15.85■□□□□ 0.13
APTX-228ENST00000486724 LMTK3Q96Q04 1460 aa15.84■□□□□ 0.13
APTX-228ENST00000486724 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
APTX-228ENST00000486724 PRG4Q92954 1404 aaPredicted RBP15.82■□□□□ 0.12
APTX-228ENST00000486724 ADCY10Q96PN6 1610 aa15.79■□□□□ 0.12
APTX-228ENST00000486724 FHAD1B1AJZ9 1412 aa15.74■□□□□ 0.11
APTX-228ENST00000486724 CHIC1Q5VXU3 224 aa15.7■□□□□ 0.1
APTX-228ENST00000486724 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
APTX-228ENST00000486724 PPRC1Q5VV67 1664 aaKnown RBP15.69■□□□□ 0.1
APTX-228ENST00000486724 SOCS7O14512 581 aa15.68■□□□□ 0.1
APTX-228ENST00000486724 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
APTX-228ENST00000486724 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
APTX-228ENST00000486724 ERICH3Q5RHP9 1530 aa15.63■□□□□ 0.09
APTX-228ENST00000486724 GLI2P10070 1586 aa15.62■□□□□ 0.09
APTX-228ENST00000486724 COL17A1Q9UMD9 1497 aaPredicted RBP15.6■□□□□ 0.09
APTX-228ENST00000486724 WRNQ14191 1432 aaPredicted RBP eCLIP15.6■□□□□ 0.09
APTX-228ENST00000486724 ILDR2Q71H61 639 aa15.57■□□□□ 0.08
APTX-228ENST00000486724 PLB1Q6P1J6 1458 aa15.56■□□□□ 0.08
APTX-228ENST00000486724 TEX14Q8IWB6 1497 aa15.54■□□□□ 0.08
APTX-228ENST00000486724 ASXL2Q76L83 1435 aa15.54■□□□□ 0.08
APTX-228ENST00000486724 DISP3Q9P2K9 1392 aa15.54■□□□□ 0.08
APTX-228ENST00000486724 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
APTX-228ENST00000486724 MAP3K4Q9Y6R4 1608 aa15.52■□□□□ 0.08
APTX-228ENST00000486724 CUL7Q14999 1698 aa15.46■□□□□ 0.07
APTX-228ENST00000486724 PTPRGP23470 1445 aa15.45■□□□□ 0.06
APTX-228ENST00000486724 BIVM-ERCC5R4GMW8 1640 aa15.45■□□□□ 0.06
APTX-228ENST00000486724 EPRSP07814 1512 aaKnown RBP15.44■□□□□ 0.06
APTX-228ENST00000486724 KIAA0586Q9BVV6 1533 aa15.44■□□□□ 0.06
APTX-228ENST00000486724 KIF21BO75037 1637 aa15.43■□□□□ 0.06
APTX-228ENST00000486724 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
APTX-228ENST00000486724 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
APTX-228ENST00000486724 UHRF1BP1LA0JNW5 1464 aa15.4■□□□□ 0.06
APTX-228ENST00000486724 PTPRMP28827 1452 aa15.4■□□□□ 0.06
APTX-228ENST00000486724 TTBK1Q5TCY1 1321 aaPredicted RBP15.37■□□□□ 0.05
APTX-228ENST00000486724 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
APTX-228ENST00000486724 CERKQ8TCT0 537 aa15.35■□□□□ 0.05
APTX-228ENST00000486724 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
APTX-228ENST00000486724 CARMIL2Q6F5E8 1435 aa15.34■□□□□ 0.05
APTX-228ENST00000486724 KDM5BQ9UGL1 1544 aa15.33■□□□□ 0.04
APTX-228ENST00000486724 UACAQ9BZF9 1416 aa15.32■□□□□ 0.04
APTX-228ENST00000486724 ZCCHC11Q5TAX3 1644 aaKnown RBP15.31■□□□□ 0.04
APTX-228ENST00000486724 MAGI3Q5TCQ9 1506 aa15.29■□□□□ 0.04
APTX-228ENST00000486724 CFAP43Q8NDM7 1665 aa15.27■□□□□ 0.03
APTX-228ENST00000486724 WDR7Q9Y4E6 1490 aa15.27■□□□□ 0.03
APTX-228ENST00000486724 MADDQ8WXG6 1647 aa15.25■□□□□ 0.03
APTX-228ENST00000486724 CD109Q6YHK3 1445 aa15.24■□□□□ 0.03
APTX-228ENST00000486724 BCORL1Q5H9F3 1711 aa15.23■□□□□ 0.03
APTX-228ENST00000486724 HSPA2P54652 639 aa15.2■□□□□ 0.02
APTX-228ENST00000486724 IQGAP2Q13576 1575 aa15.19■□□□□ 0.02
APTX-228ENST00000486724 ARAP3Q8WWN8 1544 aa15.19■□□□□ 0.02
APTX-228ENST00000486724 DISP1Q96F81 1524 aa15.17■□□□□ 0.02
APTX-228ENST00000486724 IGF1RP08069 1367 aa15.16■□□□□ 0.02
APTX-228ENST00000486724 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
APTX-228ENST00000486724 ARID4BQ4LE39 1312 aaPredicted RBP15.12■□□□□ 0.01
APTX-228ENST00000486724 KIF27Q86VH2 1401 aa15.09■□□□□ 0.01
APTX-228ENST00000486724 KCNH8Q96L42 1107 aa15.08■□□□□ 0
APTX-228ENST00000486724 KIAA0556O60303 1618 aa15.07■□□□□ 0
APTX-228ENST00000486724 PHLDB1Q86UU1 1377 aa15.07■□□□□ 0
APTX-228ENST00000486724 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
APTX-228ENST00000486724 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
APTX-228ENST00000486724 ARHGEF40Q8TER5 1519 aa15.03■□□□□ -0
APTX-228ENST00000486724 FRMPD1Q5SYB0 1578 aa15.02■□□□□ -0
APTX-228ENST00000486724 RAPGEF3O95398 923 aa15.02■□□□□ -0
APTX-228ENST00000486724 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
APTX-228ENST00000486724 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
APTX-228ENST00000486724 YEATS2Q9ULM3 1422 aa15□□□□□ -0.01
APTX-228ENST00000486724 NEO1Q92859 1461 aa14.99□□□□□ -0.01
APTX-228ENST00000486724 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
APTX-228ENST00000486724 POGZQ7Z3K3 1410 aa14.99□□□□□ -0.01
APTX-228ENST00000486724 IQSEC2Q5JU85 1478 aa14.98□□□□□ -0.01
APTX-228ENST00000486724 ABCA8O94911 1581 aa14.98□□□□□ -0.01
APTX-228ENST00000486724 FANCAO15360 1455 aa14.97□□□□□ -0.01
APTX-228ENST00000486724 ABCA9Q8IUA7 1624 aa14.97□□□□□ -0.01
APTX-228ENST00000486724 STRCQ7RTU9 1775 aa14.97□□□□□ -0.01
APTX-228ENST00000486724 TTC37Q6PGP7 1564 aa14.97□□□□□ -0.01
APTX-228ENST00000486724 FER1L4A9Z1Z3 1794 aa14.95□□□□□ -0.02
APTX-228ENST00000486724 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
APTX-228ENST00000486724 PTPRTO14522 1441 aa14.9□□□□□ -0.02
APTX-228ENST00000486724 AKNAQ7Z591 1439 aa14.9□□□□□ -0.02
APTX-228ENST00000486724 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
APTX-228ENST00000486724 SIGLEC1Q9BZZ2 1709 aa14.88□□□□□ -0.03
APTX-228ENST00000486724 GOLGA3Q08378 1498 aa14.87□□□□□ -0.03
APTX-228ENST00000486724 DENND4BO75064 1496 aaPredicted RBP14.86□□□□□ -0.03
APTX-228ENST00000486724 MED1Q15648 1581 aaPredicted RBP14.85□□□□□ -0.03
APTX-228ENST00000486724 UHRF1BP1Q6BDS2 1440 aa14.85□□□□□ -0.03
APTX-228ENST00000486724 EFCAB5A4FU69 1503 aa14.85□□□□□ -0.03
APTX-228ENST00000486724 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
APTX-228ENST00000486724 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
APTX-228ENST00000486724 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.03
APTX-228ENST00000486724 RAPGEF2Q9Y4G8 1499 aa14.83□□□□□ -0.03
APTX-228ENST00000486724 MLECQ14165 292 aa14.83□□□□□ -0.04
APTX-228ENST00000486724 ARHGEF12Q9NZN5 1544 aa14.82□□□□□ -0.04
APTX-228ENST00000486724 ATP10BO94823 1461 aa14.82□□□□□ -0.04
APTX-228ENST00000486724 CTTNBP2Q8WZ74 1663 aa14.81□□□□□ -0.04
APTX-228ENST00000486724 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
APTX-228ENST00000486724 CFAP74Q9C0B2 1584 aa14.8□□□□□ -0.04
APTX-228ENST00000486724 ARID3CA6NKF2 412 aa14.78□□□□□ -0.04
APTX-228ENST00000486724 UBAP1LF5GYI3 381 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms