RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 KIAA0586Q9BVV6 1533 aa27.24■■□□□ 1.95
HDAC8-218ENST00000486704 PRG4Q92954 1404 aaPredicted RBP27.17■■□□□ 1.94
HDAC8-218ENST00000486704 JPH4Q96JJ6 628 aa27.15■■□□□ 1.94
HDAC8-218ENST00000486704 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
HDAC8-218ENST00000486704 IQGAP2Q13576 1575 aa27.11■■□□□ 1.93
HDAC8-218ENST00000486704 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
HDAC8-218ENST00000486704 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
HDAC8-218ENST00000486704 EEA1Q15075 1411 aa26.97■■□□□ 1.91
HDAC8-218ENST00000486704 UGGT2Q9NYU1 1516 aa26.95■■□□□ 1.9
HDAC8-218ENST00000486704 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
HDAC8-218ENST00000486704 ADCY10Q96PN6 1610 aa26.9■■□□□ 1.9
HDAC8-218ENST00000486704 DISP1Q96F81 1524 aa26.89■■□□□ 1.89
HDAC8-218ENST00000486704 KIAA0556O60303 1618 aa26.87■■□□□ 1.89
HDAC8-218ENST00000486704 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
HDAC8-218ENST00000486704 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
HDAC8-218ENST00000486704 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.89
HDAC8-218ENST00000486704 PTPRGP23470 1445 aa26.81■■□□□ 1.88
HDAC8-218ENST00000486704 CHIC1Q5VXU3 224 aa26.8■■□□□ 1.88
HDAC8-218ENST00000486704 MAPKBP1O60336 1514 aa26.78■■□□□ 1.88
HDAC8-218ENST00000486704 KIF21BO75037 1637 aa26.76■■□□□ 1.87
HDAC8-218ENST00000486704 KIF13AQ9H1H9 1805 aa26.76■■□□□ 1.87
HDAC8-218ENST00000486704 GOLGA3Q08378 1498 aa26.75■■□□□ 1.87
HDAC8-218ENST00000486704 UHRF1BP1LA0JNW5 1464 aa26.72■■□□□ 1.87
HDAC8-218ENST00000486704 ABCC2Q92887 1545 aa26.69■■□□□ 1.86
HDAC8-218ENST00000486704 UACAQ9BZF9 1416 aa26.66■■□□□ 1.86
HDAC8-218ENST00000486704 NPM1P06748 294 aaKnown RBP eCLIP26.65■■□□□ 1.86
HDAC8-218ENST00000486704 SAMD9Q5K651 1589 aa26.64■■□□□ 1.86
HDAC8-218ENST00000486704 DIP2BQ9P265 1576 aa26.63■■□□□ 1.85
HDAC8-218ENST00000486704 ABCC10Q5T3U5 1492 aa26.62■■□□□ 1.85
HDAC8-218ENST00000486704 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
HDAC8-218ENST00000486704 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
HDAC8-218ENST00000486704 KDM5BQ9UGL1 1544 aa26.58■■□□□ 1.85
HDAC8-218ENST00000486704 ABCA8O94911 1581 aa26.57■■□□□ 1.84
HDAC8-218ENST00000486704 ZCCHC11Q5TAX3 1644 aaKnown RBP26.57■■□□□ 1.84
HDAC8-218ENST00000486704 PLB1Q6P1J6 1458 aa26.52■■□□□ 1.84
HDAC8-218ENST00000486704 ASXL2Q76L83 1435 aa26.48■■□□□ 1.83
HDAC8-218ENST00000486704 EFCAB5A4FU69 1503 aa26.48■■□□□ 1.83
HDAC8-218ENST00000486704 GLI2P10070 1586 aa26.45■■□□□ 1.82
HDAC8-218ENST00000486704 FAM69CQ0P6D2 419 aa26.44■■□□□ 1.82
HDAC8-218ENST00000486704 RAPGEF6Q8TEU7 1601 aa26.4■■□□□ 1.82
HDAC8-218ENST00000486704 TSPOAP1O95153 1857 aa26.39■■□□□ 1.82
HDAC8-218ENST00000486704 EPRSP07814 1512 aaKnown RBP26.36■■□□□ 1.81
HDAC8-218ENST00000486704 WDR7Q9Y4E6 1490 aa26.36■■□□□ 1.81
HDAC8-218ENST00000486704 P3H3Q8IVL6 736 aa26.35■■□□□ 1.81
HDAC8-218ENST00000486704 MAP3K4Q9Y6R4 1608 aa26.35■■□□□ 1.81
HDAC8-218ENST00000486704 FHOD3Q2V2M9 1422 aa26.34■■□□□ 1.81
HDAC8-218ENST00000486704 PPRC1Q5VV67 1664 aaKnown RBP26.34■■□□□ 1.81
HDAC8-218ENST00000486704 UBTFP17480 764 aaKnown RBP26.29■■□□□ 1.8
HDAC8-218ENST00000486704 ATP10BO94823 1461 aa26.26■■□□□ 1.79
HDAC8-218ENST00000486704 CFAP43Q8NDM7 1665 aa26.25■■□□□ 1.79
HDAC8-218ENST00000486704 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
HDAC8-218ENST00000486704 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
HDAC8-218ENST00000486704 KDM6BO15054 1643 aa26.24■■□□□ 1.79
HDAC8-218ENST00000486704 ARHGAP35Q9NRY4 1499 aa26.23■■□□□ 1.79
HDAC8-218ENST00000486704 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
HDAC8-218ENST00000486704 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
HDAC8-218ENST00000486704 FMN1Q68DA7 1419 aa26.15■■□□□ 1.78
HDAC8-218ENST00000486704 ABCA9Q8IUA7 1624 aa26.14■■□□□ 1.77
HDAC8-218ENST00000486704 HECW1Q76N89 1606 aa26.13■■□□□ 1.77
HDAC8-218ENST00000486704 MAGI3Q5TCQ9 1506 aa26.12■■□□□ 1.77
HDAC8-218ENST00000486704 ARID3CA6NKF2 412 aa26.09■■□□□ 1.77
HDAC8-218ENST00000486704 CD109Q6YHK3 1445 aa26.07■■□□□ 1.76
HDAC8-218ENST00000486704 KCNH8Q96L42 1107 aa26.04■■□□□ 1.76
HDAC8-218ENST00000486704 CDK13Q14004 1512 aaKnown RBP26.04■■□□□ 1.76
HDAC8-218ENST00000486704 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
HDAC8-218ENST00000486704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.99■■□□□ 1.75
HDAC8-218ENST00000486704 HNRNPUL2Q1KMD3 747 aaKnown RBP25.99■■□□□ 1.75
HDAC8-218ENST00000486704 PCF11O94913 1555 aaKnown RBP25.99■■□□□ 1.75
HDAC8-218ENST00000486704 COL17A1Q9UMD9 1497 aaPredicted RBP25.98■■□□□ 1.75
HDAC8-218ENST00000486704 CLIP1P30622 1438 aa25.97■■□□□ 1.75
HDAC8-218ENST00000486704 PLEKHD1A6NEE1 506 aa25.94■■□□□ 1.74
HDAC8-218ENST00000486704 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
HDAC8-218ENST00000486704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.93■■□□□ 1.74
HDAC8-218ENST00000486704 TTC37Q6PGP7 1564 aa25.91■■□□□ 1.74
HDAC8-218ENST00000486704 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
HDAC8-218ENST00000486704 ARAP3Q8WWN8 1544 aa25.9■■□□□ 1.74
HDAC8-218ENST00000486704 CCDC18Q5T9S5 1454 aa25.89■■□□□ 1.73
HDAC8-218ENST00000486704 NEO1Q92859 1461 aa25.89■■□□□ 1.73
HDAC8-218ENST00000486704 CFAP74Q9C0B2 1584 aa25.88■■□□□ 1.73
HDAC8-218ENST00000486704 PHLDB1Q86UU1 1377 aa25.88■■□□□ 1.73
HDAC8-218ENST00000486704 KIF14Q15058 1648 aa25.85■■□□□ 1.73
HDAC8-218ENST00000486704 CEP162Q5TB80 1403 aa25.83■■□□□ 1.73
HDAC8-218ENST00000486704 MYO5CQ9NQX4 1742 aa25.83■■□□□ 1.72
HDAC8-218ENST00000486704 ATP1B4Q9UN42 357 aaPredicted RBP25.82■■□□□ 1.72
HDAC8-218ENST00000486704 TROQ12816 1431 aaPredicted RBP25.81■■□□□ 1.72
HDAC8-218ENST00000486704 CDK11AQ9UQ88 783 aaPredicted RBP25.81■■□□□ 1.72
HDAC8-218ENST00000486704 FANCAO15360 1455 aa25.77■■□□□ 1.72
HDAC8-218ENST00000486704 FRMPD1Q5SYB0 1578 aa25.76■■□□□ 1.71
HDAC8-218ENST00000486704 RICTORQ6R327 1708 aa25.74■■□□□ 1.71
HDAC8-218ENST00000486704 PLCH2O75038 1416 aa25.72■■□□□ 1.71
HDAC8-218ENST00000486704 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
HDAC8-218ENST00000486704 PREX2Q70Z35 1606 aa25.68■■□□□ 1.7
HDAC8-218ENST00000486704 CDC42BPBQ9Y5S2 1711 aa25.67■■□□□ 1.7
HDAC8-218ENST00000486704 DENND4BO75064 1496 aaPredicted RBP25.66■■□□□ 1.7
HDAC8-218ENST00000486704 ZMYM4Q5VZL5 1548 aa25.64■■□□□ 1.7
HDAC8-218ENST00000486704 CDC42BPAQ5VT25 1732 aa25.64■■□□□ 1.7
HDAC8-218ENST00000486704 ADGRL1O94910 1474 aa25.62■■□□□ 1.69
HDAC8-218ENST00000486704 LOC105371045A0A1W2PR82 267 aa25.62■■□□□ 1.69
HDAC8-218ENST00000486704 AEBP2Q6ZN18 517 aaPredicted RBP25.62■■□□□ 1.69
HDAC8-218ENST00000486704 ARHGAP5Q13017 1502 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms