RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.89
C9orf16-202ENST00000486420 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
C9orf16-202ENST00000486420 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
C9orf16-202ENST00000486420 ERCC6L2Q5T890 1561 aa20.54■□□□□ 0.88
C9orf16-202ENST00000486420 KIAA0586Q9BVV6 1533 aa20.52■□□□□ 0.87
C9orf16-202ENST00000486420 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
C9orf16-202ENST00000486420 JPH4Q96JJ6 628 aa20.42■□□□□ 0.86
C9orf16-202ENST00000486420 PRG4Q92954 1404 aaPredicted RBP20.42■□□□□ 0.86
C9orf16-202ENST00000486420 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
C9orf16-202ENST00000486420 KIF21BO75037 1637 aa20.38■□□□□ 0.85
C9orf16-202ENST00000486420 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
C9orf16-202ENST00000486420 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
C9orf16-202ENST00000486420 FAM9AQ8IZU1 332 aaPredicted RBP20.33■□□□□ 0.85
C9orf16-202ENST00000486420 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
C9orf16-202ENST00000486420 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
C9orf16-202ENST00000486420 UGGT2Q9NYU1 1516 aa20.29■□□□□ 0.84
C9orf16-202ENST00000486420 ADCY10Q96PN6 1610 aa20.24■□□□□ 0.83
C9orf16-202ENST00000486420 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
C9orf16-202ENST00000486420 KIF13AQ9H1H9 1805 aa20.2■□□□□ 0.82
C9orf16-202ENST00000486420 MAPKBP1O60336 1514 aa20.2■□□□□ 0.82
C9orf16-202ENST00000486420 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
C9orf16-202ENST00000486420 PTPRGP23470 1445 aa20.18■□□□□ 0.82
C9orf16-202ENST00000486420 DISP1Q96F81 1524 aa20.16■□□□□ 0.82
C9orf16-202ENST00000486420 KIAA0556O60303 1618 aa20.15■□□□□ 0.82
C9orf16-202ENST00000486420 EFCAB5A4FU69 1503 aa20.14■□□□□ 0.81
C9orf16-202ENST00000486420 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
C9orf16-202ENST00000486420 DIP2BQ9P265 1576 aa20.1■□□□□ 0.81
C9orf16-202ENST00000486420 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
C9orf16-202ENST00000486420 SAMD9Q5K651 1589 aa20.08■□□□□ 0.8
C9orf16-202ENST00000486420 UHRF1BP1LA0JNW5 1464 aa20.06■□□□□ 0.8
C9orf16-202ENST00000486420 ABCC2Q92887 1545 aa20.06■□□□□ 0.8
C9orf16-202ENST00000486420 UACAQ9BZF9 1416 aa20.04■□□□□ 0.8
C9orf16-202ENST00000486420 FMN1Q68DA7 1419 aa19.96■□□□□ 0.79
C9orf16-202ENST00000486420 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
C9orf16-202ENST00000486420 TTBK1Q5TCY1 1321 aaPredicted RBP19.96■□□□□ 0.79
C9orf16-202ENST00000486420 KDM5BQ9UGL1 1544 aa19.96■□□□□ 0.79
C9orf16-202ENST00000486420 PLB1Q6P1J6 1458 aa19.95■□□□□ 0.78
C9orf16-202ENST00000486420 FAM69CQ0P6D2 419 aa19.94■□□□□ 0.78
C9orf16-202ENST00000486420 EHMT2Q96KQ7 1210 aa19.94■□□□□ 0.78
C9orf16-202ENST00000486420 TSPOAP1O95153 1857 aa19.92■□□□□ 0.78
C9orf16-202ENST00000486420 ABCA8O94911 1581 aa19.92■□□□□ 0.78
C9orf16-202ENST00000486420 GLI2P10070 1586 aa19.92■□□□□ 0.78
C9orf16-202ENST00000486420 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
C9orf16-202ENST00000486420 ASXL2Q76L83 1435 aa19.92■□□□□ 0.78
C9orf16-202ENST00000486420 RANGAP1P46060 587 aaPredicted RBP19.91■□□□□ 0.78
C9orf16-202ENST00000486420 CLIP1P30622 1438 aa19.9■□□□□ 0.78
C9orf16-202ENST00000486420 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
C9orf16-202ENST00000486420 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
C9orf16-202ENST00000486420 KDM6BO15054 1643 aa19.87■□□□□ 0.77
C9orf16-202ENST00000486420 RAPGEF6Q8TEU7 1601 aa19.87■□□□□ 0.77
C9orf16-202ENST00000486420 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
C9orf16-202ENST00000486420 MAP3K4Q9Y6R4 1608 aa19.84■□□□□ 0.77
C9orf16-202ENST00000486420 EPRSP07814 1512 aaKnown RBP19.82■□□□□ 0.76
C9orf16-202ENST00000486420 WDR7Q9Y4E6 1490 aa19.82■□□□□ 0.76
C9orf16-202ENST00000486420 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
C9orf16-202ENST00000486420 HECW1Q76N89 1606 aa19.79■□□□□ 0.76
C9orf16-202ENST00000486420 CDK11AQ9UQ88 783 aaPredicted RBP19.78■□□□□ 0.76
C9orf16-202ENST00000486420 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.76
C9orf16-202ENST00000486420 NUP153P49790 1475 aaKnown RBP19.75■□□□□ 0.75
C9orf16-202ENST00000486420 TEX14Q8IWB6 1497 aa19.75■□□□□ 0.75
C9orf16-202ENST00000486420 CASKIN1Q8WXD9 1431 aa19.75■□□□□ 0.75
C9orf16-202ENST00000486420 ATP10BO94823 1461 aa19.74■□□□□ 0.75
C9orf16-202ENST00000486420 LOC105371045A0A1W2PR82 267 aa19.74■□□□□ 0.75
C9orf16-202ENST00000486420 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
C9orf16-202ENST00000486420 FYCO1Q9BQS8 1478 aa19.73■□□□□ 0.75
C9orf16-202ENST00000486420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
C9orf16-202ENST00000486420 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
C9orf16-202ENST00000486420 PLEKHD1A6NEE1 506 aa19.72■□□□□ 0.75
C9orf16-202ENST00000486420 ATP1B4Q9UN42 357 aaPredicted RBP19.68■□□□□ 0.74
C9orf16-202ENST00000486420 MAGI3Q5TCQ9 1506 aa19.65■□□□□ 0.74
C9orf16-202ENST00000486420 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
C9orf16-202ENST00000486420 PCF11O94913 1555 aaKnown RBP19.62■□□□□ 0.73
C9orf16-202ENST00000486420 VPS8Q8N3P4 1428 aa19.61■□□□□ 0.73
C9orf16-202ENST00000486420 CD109Q6YHK3 1445 aa19.6■□□□□ 0.73
C9orf16-202ENST00000486420 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
C9orf16-202ENST00000486420 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
C9orf16-202ENST00000486420 KCNH8Q96L42 1107 aa19.58■□□□□ 0.72
C9orf16-202ENST00000486420 PHLDB1Q86UU1 1377 aa19.57■□□□□ 0.72
C9orf16-202ENST00000486420 CDK13Q14004 1512 aaKnown RBP19.56■□□□□ 0.72
C9orf16-202ENST00000486420 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
C9orf16-202ENST00000486420 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
C9orf16-202ENST00000486420 APLP2Q06481 763 aa19.53■□□□□ 0.72
C9orf16-202ENST00000486420 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
C9orf16-202ENST00000486420 KIF14Q15058 1648 aa19.51■□□□□ 0.71
C9orf16-202ENST00000486420 MTUS2Q5JR59 1369 aa19.49■□□□□ 0.71
C9orf16-202ENST00000486420 ARAP3Q8WWN8 1544 aa19.48■□□□□ 0.71
C9orf16-202ENST00000486420 CFAP74Q9C0B2 1584 aa19.48■□□□□ 0.71
C9orf16-202ENST00000486420 NEO1Q92859 1461 aa19.46■□□□□ 0.71
C9orf16-202ENST00000486420 EHBP1L1Q8N3D4 1523 aa19.45■□□□□ 0.7
C9orf16-202ENST00000486420 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
C9orf16-202ENST00000486420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.44■□□□□ 0.78e-8■■□□□ 12
C9orf16-202ENST00000486420 TTC37Q6PGP7 1564 aa19.43■□□□□ 0.7
C9orf16-202ENST00000486420 TIAM1Q13009 1591 aa19.42■□□□□ 0.7
C9orf16-202ENST00000486420 PLCH2O75038 1416 aa19.42■□□□□ 0.7
C9orf16-202ENST00000486420 ADGRL1O94910 1474 aa19.41■□□□□ 0.7
C9orf16-202ENST00000486420 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
C9orf16-202ENST00000486420 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
C9orf16-202ENST00000486420 FRMPD1Q5SYB0 1578 aa19.37■□□□□ 0.69
C9orf16-202ENST00000486420 FANCAO15360 1455 aa19.37■□□□□ 0.69
C9orf16-202ENST00000486420 KDM4FA0A1W2PPD8 638 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms