RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 ERCC6L2Q5T890 1561 aa33.3■■■□□ 2.92
LIMK1-206ENST00000486361 RAPGEF2Q9Y4G8 1499 aa33.25■■■□□ 2.91
LIMK1-206ENST00000486361 SHROOM2Q13796 1616 aa33.24■■■□□ 2.91
LIMK1-206ENST00000486361 KIAA0586Q9BVV6 1533 aa33.23■■■□□ 2.91
LIMK1-206ENST00000486361 PRG4Q92954 1404 aaPredicted RBP33.22■■■□□ 2.91
LIMK1-206ENST00000486361 FAM9AQ8IZU1 332 aaPredicted RBP33.2■■■□□ 2.91
LIMK1-206ENST00000486361 CSRNP3Q8WYN3 585 aa33.17■■■□□ 2.9
LIMK1-206ENST00000486361 PRXQ9BXM0 1461 aa33.12■■■□□ 2.89
LIMK1-206ENST00000486361 EEA1Q15075 1411 aa33.03■■■□□ 2.88
LIMK1-206ENST00000486361 IQGAP2Q13576 1575 aa33.01■■■□□ 2.88
LIMK1-206ENST00000486361 TTBK1Q5TCY1 1321 aaPredicted RBP32.95■■■□□ 2.86
LIMK1-206ENST00000486361 CARMIL2Q6F5E8 1435 aa32.88■■■□□ 2.85
LIMK1-206ENST00000486361 EHMT2Q96KQ7 1210 aa32.85■■■□□ 2.85
LIMK1-206ENST00000486361 CTTNBP2Q8WZ74 1663 aa32.85■■■□□ 2.85
LIMK1-206ENST00000486361 DISP1Q96F81 1524 aa32.83■■■□□ 2.85
LIMK1-206ENST00000486361 UGGT2Q9NYU1 1516 aa32.83■■■□□ 2.85
LIMK1-206ENST00000486361 TRHP20396 242 aaPredicted RBP32.82■■■□□ 2.84
LIMK1-206ENST00000486361 PTPRGP23470 1445 aa32.82■■■□□ 2.84
LIMK1-206ENST00000486361 TNIKQ9UKE5 1360 aa32.81■■■□□ 2.84
LIMK1-206ENST00000486361 KIF21BO75037 1637 aa32.71■■■□□ 2.83
LIMK1-206ENST00000486361 RANGAP1P46060 587 aaPredicted RBP32.71■■■□□ 2.83
LIMK1-206ENST00000486361 KIAA0556O60303 1618 aa32.7■■■□□ 2.83
LIMK1-206ENST00000486361 P3H3Q8IVL6 736 aa32.67■■■□□ 2.82
LIMK1-206ENST00000486361 NPM1P06748 294 aaKnown RBP eCLIP32.66■■■□□ 2.82
LIMK1-206ENST00000486361 ADCY10Q96PN6 1610 aa32.66■■■□□ 2.82
LIMK1-206ENST00000486361 GOLGA3Q08378 1498 aa32.64■■■□□ 2.82
LIMK1-206ENST00000486361 UBTFP17480 764 aaKnown RBP32.63■■■□□ 2.81
LIMK1-206ENST00000486361 UACAQ9BZF9 1416 aa32.57■■■□□ 2.8
LIMK1-206ENST00000486361 UHRF1BP1LA0JNW5 1464 aa32.48■■■□□ 2.79
LIMK1-206ENST00000486361 PLB1Q6P1J6 1458 aa32.48■■■□□ 2.79
LIMK1-206ENST00000486361 ABCC2Q92887 1545 aa32.46■■■□□ 2.79
LIMK1-206ENST00000486361 SAMD9Q5K651 1589 aa32.45■■■□□ 2.79
LIMK1-206ENST00000486361 MAPKBP1O60336 1514 aa32.41■■■□□ 2.78
LIMK1-206ENST00000486361 FHOD3Q2V2M9 1422 aa32.39■■■□□ 2.78
LIMK1-206ENST00000486361 FAM69CQ0P6D2 419 aa32.37■■■□□ 2.77
LIMK1-206ENST00000486361 ABCA8O94911 1581 aa32.36■■■□□ 2.77
LIMK1-206ENST00000486361 ARID3CA6NKF2 412 aa32.34■■■□□ 2.77
LIMK1-206ENST00000486361 KDM5BQ9UGL1 1544 aa32.34■■■□□ 2.77
LIMK1-206ENST00000486361 ABCC10Q5T3U5 1492 aa32.33■■■□□ 2.77
LIMK1-206ENST00000486361 ASXL2Q76L83 1435 aa32.32■■■□□ 2.76
LIMK1-206ENST00000486361 KIF13AQ9H1H9 1805 aa32.29■■■□□ 2.76
LIMK1-206ENST00000486361 ZCCHC11Q5TAX3 1644 aaKnown RBP32.28■■■□□ 2.76
LIMK1-206ENST00000486361 EFCAB5A4FU69 1503 aa32.27■■■□□ 2.76
LIMK1-206ENST00000486361 DIP2BQ9P265 1576 aa32.24■■■□□ 2.75
LIMK1-206ENST00000486361 ARHGAP35Q9NRY4 1499 aa32.22■■■□□ 2.75
LIMK1-206ENST00000486361 RAPGEF6Q8TEU7 1601 aa32.18■■■□□ 2.74
LIMK1-206ENST00000486361 ATP10BO94823 1461 aa32.16■■■□□ 2.74
LIMK1-206ENST00000486361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.14■■■□□ 2.74
LIMK1-206ENST00000486361 HNRNPUL2Q1KMD3 747 aaKnown RBP32.14■■■□□ 2.74
LIMK1-206ENST00000486361 KCNH8Q96L42 1107 aa32.13■■■□□ 2.73
LIMK1-206ENST00000486361 LOC105371045A0A1W2PR82 267 aa32.11■■■□□ 2.73
LIMK1-206ENST00000486361 EPRSP07814 1512 aaKnown RBP32.1■■■□□ 2.73
LIMK1-206ENST00000486361 NUP153P49790 1475 aaKnown RBP32.1■■■□□ 2.73
LIMK1-206ENST00000486361 WDR7Q9Y4E6 1490 aa32.1■■■□□ 2.73
LIMK1-206ENST00000486361 ATP1B4Q9UN42 357 aaPredicted RBP32.08■■■□□ 2.73
LIMK1-206ENST00000486361 TSPOAP1O95153 1857 aa32.03■■■□□ 2.72
LIMK1-206ENST00000486361 GLI2P10070 1586 aa32.03■■■□□ 2.72
LIMK1-206ENST00000486361 FMN1Q68DA7 1419 aa32.03■■■□□ 2.72
LIMK1-206ENST00000486361 CLIP1P30622 1438 aa32.02■■■□□ 2.72
LIMK1-206ENST00000486361 CDK13Q14004 1512 aaKnown RBP31.91■■■□□ 2.7
LIMK1-206ENST00000486361 PLEKHD1A6NEE1 506 aa31.91■■■□□ 2.7
LIMK1-206ENST00000486361 MAP3K4Q9Y6R4 1608 aa31.89■■■□□ 2.7
LIMK1-206ENST00000486361 PPRC1Q5VV67 1664 aaKnown RBP31.87■■■□□ 2.69
LIMK1-206ENST00000486361 CEP162Q5TB80 1403 aa31.87■■■□□ 2.69
LIMK1-206ENST00000486361 CD109Q6YHK3 1445 aa31.86■■■□□ 2.69
LIMK1-206ENST00000486361 HECW1Q76N89 1606 aa31.86■■■□□ 2.69
LIMK1-206ENST00000486361 CASKIN1Q8WXD9 1431 aa31.8■■■□□ 2.68
LIMK1-206ENST00000486361 PCF11O94913 1555 aaKnown RBP31.79■■■□□ 2.68
LIMK1-206ENST00000486361 CFAP43Q8NDM7 1665 aa31.77■■■□□ 2.68
LIMK1-206ENST00000486361 KDM6BO15054 1643 aa31.75■■■□□ 2.67
LIMK1-206ENST00000486361 TEX14Q8IWB6 1497 aa31.75■■■□□ 2.67
LIMK1-206ENST00000486361 LRRIQ1Q96JM4 1722 aa31.73■■■□□ 2.67
LIMK1-206ENST00000486361 MAGI3Q5TCQ9 1506 aa31.73■■■□□ 2.67
LIMK1-206ENST00000486361 CDK11AQ9UQ88 783 aaPredicted RBP31.72■■■□□ 2.67
LIMK1-206ENST00000486361 ABCA9Q8IUA7 1624 aa31.71■■■□□ 2.67
LIMK1-206ENST00000486361 COL17A1Q9UMD9 1497 aaPredicted RBP31.7■■■□□ 2.66
LIMK1-206ENST00000486361 FYCO1Q9BQS8 1478 aa31.67■■■□□ 2.66
LIMK1-206ENST00000486361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.65■■■□□ 2.66
LIMK1-206ENST00000486361 CCDC18Q5T9S5 1454 aa31.62■■■□□ 2.65
LIMK1-206ENST00000486361 TROQ12816 1431 aaPredicted RBP31.6■■■□□ 2.65
LIMK1-206ENST00000486361 TTC37Q6PGP7 1564 aa31.59■■■□□ 2.65
LIMK1-206ENST00000486361 KIF14Q15058 1648 aa31.54■■■□□ 2.64
LIMK1-206ENST00000486361 NEO1Q92859 1461 aa31.47■■■□□ 2.63
LIMK1-206ENST00000486361 PLCH2O75038 1416 aa31.47■■■□□ 2.63
LIMK1-206ENST00000486361 PHLDB1Q86UU1 1377 aa31.46■■■□□ 2.63
LIMK1-206ENST00000486361 RAPGEF3O95398 923 aa31.46■■■□□ 2.63
LIMK1-206ENST00000486361 VPS8Q8N3P4 1428 aa31.46■■■□□ 2.63
LIMK1-206ENST00000486361 FANCAO15360 1455 aa31.46■■■□□ 2.63
LIMK1-206ENST00000486361 ARAP3Q8WWN8 1544 aa31.45■■■□□ 2.63
LIMK1-206ENST00000486361 AKNAQ7Z591 1439 aa31.43■■■□□ 2.62
LIMK1-206ENST00000486361 EFCAB2Q5VUJ9 269 aa31.39■■■□□ 2.62
LIMK1-206ENST00000486361 MTUS2Q5JR59 1369 aa31.39■■■□□ 2.62
LIMK1-206ENST00000486361 MYO5CQ9NQX4 1742 aa31.36■■■□□ 2.61
LIMK1-206ENST00000486361 ARHGAP5Q13017 1502 aa31.32■■■□□ 2.6
LIMK1-206ENST00000486361 CFAP74Q9C0B2 1584 aa31.31■■■□□ 2.6
LIMK1-206ENST00000486361 DENND4BO75064 1496 aaPredicted RBP31.31■■■□□ 2.6
LIMK1-206ENST00000486361 SCAPERQ9BY12 1400 aa31.3■■■□□ 2.6
LIMK1-206ENST00000486361 ADGRL1O94910 1474 aa31.29■■■□□ 2.6
LIMK1-206ENST00000486361 FRMPD1Q5SYB0 1578 aa31.26■■■□□ 2.6
LIMK1-206ENST00000486361 CDC42BPBQ9Y5S2 1711 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms