RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
PKD1-219ENST00000486339 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
PKD1-219ENST00000486339 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
PKD1-219ENST00000486339 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
PKD1-219ENST00000486339 NCAPD3P42695 1498 aa18.66■□□□□ 0.58
PKD1-219ENST00000486339 DDX10Q13206 875 aaKnown RBP18.64■□□□□ 0.57
PKD1-219ENST00000486339 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
PKD1-219ENST00000486339 CCNB3Q8WWL7 1395 aa18.62■□□□□ 0.57
PKD1-219ENST00000486339 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
PKD1-219ENST00000486339 RAPGEF2Q9Y4G8 1499 aa18.59■□□□□ 0.57
PKD1-219ENST00000486339 NEFMP07197 916 aa18.56■□□□□ 0.56
PKD1-219ENST00000486339 DAXXQ9UER7 740 aaPredicted RBP18.55■□□□□ 0.56
PKD1-219ENST00000486339 FMN1Q68DA7 1419 aa18.54■□□□□ 0.56
PKD1-219ENST00000486339 KANK4Q5T7N3 995 aaPredicted RBP18.54■□□□□ 0.56
PKD1-219ENST00000486339 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
PKD1-219ENST00000486339 RGL3Q3MIN7 710 aa18.51■□□□□ 0.55
PKD1-219ENST00000486339 CLSPNQ9HAW4 1339 aa18.5■□□□□ 0.55
PKD1-219ENST00000486339 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
PKD1-219ENST00000486339 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
PKD1-219ENST00000486339 GTF3C3Q9Y5Q9 886 aa18.48■□□□□ 0.55
PKD1-219ENST00000486339 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
PKD1-219ENST00000486339 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
PKD1-219ENST00000486339 ARHGAP35Q9NRY4 1499 aa18.45■□□□□ 0.54
PKD1-219ENST00000486339 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
PKD1-219ENST00000486339 ARID4BQ4LE39 1312 aaPredicted RBP18.44■□□□□ 0.54
PKD1-219ENST00000486339 SLC24A1O60721 1099 aa18.43■□□□□ 0.54
PKD1-219ENST00000486339 SIN3AQ96ST3 1273 aa18.41■□□□□ 0.54
PKD1-219ENST00000486339 PPP1R15AO75807 674 aaPredicted RBP18.41■□□□□ 0.54
PKD1-219ENST00000486339 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
PKD1-219ENST00000486339 SENP3Q9H4L4 574 aaPredicted RBP18.4■□□□□ 0.54
PKD1-219ENST00000486339 CANXP27824 592 aaKnown RBP18.39■□□□□ 0.53
PKD1-219ENST00000486339 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
PKD1-219ENST00000486339 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
PKD1-219ENST00000486339 IGF1RP08069 1367 aa18.38■□□□□ 0.53
PKD1-219ENST00000486339 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
PKD1-219ENST00000486339 GAPVD1Q14C86 1478 aa18.36■□□□□ 0.53
PKD1-219ENST00000486339 CFTRP13569 1480 aa18.35■□□□□ 0.53
PKD1-219ENST00000486339 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
PKD1-219ENST00000486339 MRS2Q9HD23 443 aa18.33■□□□□ 0.52
PKD1-219ENST00000486339 SETD5Q9C0A6 1442 aa18.32■□□□□ 0.52
PKD1-219ENST00000486339 CC2D2AQ9P2K1 1620 aa18.32■□□□□ 0.52
PKD1-219ENST00000486339 CARD11Q9BXL7 1154 aa18.31■□□□□ 0.52
PKD1-219ENST00000486339 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
PKD1-219ENST00000486339 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
PKD1-219ENST00000486339 MIER1Q8N108 512 aa18.3■□□□□ 0.52
PKD1-219ENST00000486339 ZBTB47Q9UFB7 747 aaPredicted RBP18.3■□□□□ 0.52
PKD1-219ENST00000486339 SALL2Q9Y467 1007 aaPredicted RBP18.29■□□□□ 0.52
PKD1-219ENST00000486339 BICRAQ9NZM4 1560 aa18.29■□□□□ 0.52
PKD1-219ENST00000486339 NESP48681 1621 aa18.27■□□□□ 0.52
PKD1-219ENST00000486339 KANK1Q14678 1352 aa18.26■□□□□ 0.51
PKD1-219ENST00000486339 WDR43Q15061 677 aaKnown RBP eCLIP18.25■□□□□ 0.51
PKD1-219ENST00000486339 CCDC18Q5T9S5 1454 aa18.24■□□□□ 0.51
PKD1-219ENST00000486339 AQRO60306 1485 aaKnown RBP eCLIP18.24■□□□□ 0.511e-6■■■■■ 50
PKD1-219ENST00000486339 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
PKD1-219ENST00000486339 PTPRGP23470 1445 aa18.23■□□□□ 0.51
PKD1-219ENST00000486339 GGT6Q6P531 493 aa18.22■□□□□ 0.51
PKD1-219ENST00000486339 CDCA8Q53HL2 280 aa18.22■□□□□ 0.51
PKD1-219ENST00000486339 PKD2Q13563 968 aa18.22■□□□□ 0.51
PKD1-219ENST00000486339 RAB3GAP2Q9H2M9 1393 aa18.22■□□□□ 0.51
PKD1-219ENST00000486339 MLECQ14165 292 aa18.22■□□□□ 0.51
PKD1-219ENST00000486339 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
PKD1-219ENST00000486339 ANKRD30AQ9BXX3 1397 aa18.21■□□□□ 0.5
PKD1-219ENST00000486339 BCL11AQ9H165 835 aa18.18■□□□□ 0.5
PKD1-219ENST00000486339 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
PKD1-219ENST00000486339 OSCARQ8IYS5 282 aa18.18■□□□□ 0.5
PKD1-219ENST00000486339 FOXD1Q16676 465 aa18.17■□□□□ 0.5
PKD1-219ENST00000486339 C14orf37Q86TY3 774 aa18.17■□□□□ 0.5
PKD1-219ENST00000486339 NUP155O75694 1391 aa18.16■□□□□ 0.5
PKD1-219ENST00000486339 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
PKD1-219ENST00000486339 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
PKD1-219ENST00000486339 MPHOSPH9Q99550 1183 aa18.15■□□□□ 0.5
PKD1-219ENST00000486339 FKBP8Q14318 412 aa18.15■□□□□ 0.5
PKD1-219ENST00000486339 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
PKD1-219ENST00000486339 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
PKD1-219ENST00000486339 POGKQ9P215 609 aa18.12■□□□□ 0.49
PKD1-219ENST00000486339 SPAG9O60271 1321 aaKnown RBP18.12■□□□□ 0.49
PKD1-219ENST00000486339 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
PKD1-219ENST00000486339 KIF3BO15066 747 aa18.1■□□□□ 0.49
PKD1-219ENST00000486339 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
PKD1-219ENST00000486339 SCAF1Q9H7N4 1312 aaKnown RBP18.1■□□□□ 0.49
PKD1-219ENST00000486339 CYB5RLQ6IPT4 315 aa18.09■□□□□ 0.49
PKD1-219ENST00000486339 DNAJC5BQ9UF47 199 aa18.07■□□□□ 0.48
PKD1-219ENST00000486339 POLA1P09884 1462 aaPredicted RBP18.06■□□□□ 0.48
PKD1-219ENST00000486339 CUX1P39880 1505 aa18.06■□□□□ 0.48
PKD1-219ENST00000486339 PLEKHG5O94827 1062 aa18.05■□□□□ 0.48
PKD1-219ENST00000486339 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
PKD1-219ENST00000486339 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
PKD1-219ENST00000486339 TMF1P82094 1093 aa18.03■□□□□ 0.48
PKD1-219ENST00000486339 CFAP53Q96M91 514 aa18.03■□□□□ 0.48
PKD1-219ENST00000486339 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
PKD1-219ENST00000486339 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
PKD1-219ENST00000486339 ERICH3Q5RHP9 1530 aa18.01■□□□□ 0.47
PKD1-219ENST00000486339 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
PKD1-219ENST00000486339 KIF21BO75037 1637 aa18■□□□□ 0.47
PKD1-219ENST00000486339 ZBTB7CA1YPR0 619 aa18■□□□□ 0.47
PKD1-219ENST00000486339 PRXQ9BXM0 1461 aa17.99■□□□□ 0.47
PKD1-219ENST00000486339 HSPA5P11021 654 aaKnown RBP17.98■□□□□ 0.47
PKD1-219ENST00000486339 PPM1GO15355 546 aaPredicted RBP17.98■□□□□ 0.47
PKD1-219ENST00000486339 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
PKD1-219ENST00000486339 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms