RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 RUSC2Q8N2Y8 1516 aa39■■■■□ 3.83
SREBF1-214ENST00000486311 CUL7Q14999 1698 aa38.91■■■■□ 3.82
SREBF1-214ENST00000486311 KIAA0586Q9BVV6 1533 aa38.89■■■■□ 3.82
SREBF1-214ENST00000486311 CARMIL1Q5VZK9 1371 aa38.82■■■■□ 3.81
SREBF1-214ENST00000486311 NPM1P06748 294 aaKnown RBP eCLIP38.6■■■■□ 3.77
SREBF1-214ENST00000486311 KIF13AQ9H1H9 1805 aa38.56■■■■□ 3.76
SREBF1-214ENST00000486311 ADCY10Q96PN6 1610 aa38.54■■■■□ 3.76
SREBF1-214ENST00000486311 MAPKBP1O60336 1514 aa38.51■■■■□ 3.76
SREBF1-214ENST00000486311 PTPRGP23470 1445 aa38.5■■■■□ 3.75
SREBF1-214ENST00000486311 CARMIL2Q6F5E8 1435 aa38.49■■■■□ 3.75
SREBF1-214ENST00000486311 RAPGEF2Q9Y4G8 1499 aa38.48■■■■□ 3.75
SREBF1-214ENST00000486311 IQGAP2Q13576 1575 aa38.48■■■■□ 3.75
SREBF1-214ENST00000486311 ABCC10Q5T3U5 1492 aa38.47■■■■□ 3.75
SREBF1-214ENST00000486311 TNIKQ9UKE5 1360 aa38.45■■■■□ 3.75
SREBF1-214ENST00000486311 AEBP2Q6ZN18 517 aaPredicted RBP38.44■■■■□ 3.74
SREBF1-214ENST00000486311 FAM69CQ0P6D2 419 aa38.43■■■■□ 3.74
SREBF1-214ENST00000486311 TTBK1Q5TCY1 1321 aaPredicted RBP38.36■■■■□ 3.73
SREBF1-214ENST00000486311 DISP1Q96F81 1524 aa38.33■■■■□ 3.73
SREBF1-214ENST00000486311 DIP2BQ9P265 1576 aa38.32■■■■□ 3.73
SREBF1-214ENST00000486311 UGGT2Q9NYU1 1516 aa38.28■■■■□ 3.72
SREBF1-214ENST00000486311 ABCC2Q92887 1545 aa38.27■■■■□ 3.72
SREBF1-214ENST00000486311 UHRF1BP1LA0JNW5 1464 aa38.23■■■■□ 3.71
SREBF1-214ENST00000486311 UACAQ9BZF9 1416 aa38.21■■■■□ 3.71
SREBF1-214ENST00000486311 PRXQ9BXM0 1461 aa38.15■■■■□ 3.7
SREBF1-214ENST00000486311 KIAA0556O60303 1618 aa38.13■■■■□ 3.69
SREBF1-214ENST00000486311 ASXL2Q76L83 1435 aa38.11■■■■□ 3.69
SREBF1-214ENST00000486311 PLB1Q6P1J6 1458 aa38.09■■■■□ 3.69
SREBF1-214ENST00000486311 KDM5BQ9UGL1 1544 aa38.05■■■■□ 3.68
SREBF1-214ENST00000486311 CTTNBP2Q8WZ74 1663 aa38.01■■■■□ 3.67
SREBF1-214ENST00000486311 TSPOAP1O95153 1857 aa38.01■■■■□ 3.67
SREBF1-214ENST00000486311 GOLGA3Q08378 1498 aa38■■■■□ 3.67
SREBF1-214ENST00000486311 GLI2P10070 1586 aa37.97■■■■□ 3.67
SREBF1-214ENST00000486311 KDM6BO15054 1643 aa37.93■■■■□ 3.66
SREBF1-214ENST00000486311 CSRNP3Q8WYN3 585 aa37.9■■■■□ 3.66
SREBF1-214ENST00000486311 EPRSP07814 1512 aaKnown RBP37.88■■■■□ 3.65
SREBF1-214ENST00000486311 ZCCHC11Q5TAX3 1644 aaKnown RBP37.87■■■■□ 3.65
SREBF1-214ENST00000486311 ABCA8O94911 1581 aa37.8■■■■□ 3.64
SREBF1-214ENST00000486311 PPRC1Q5VV67 1664 aaKnown RBP37.77■■■■□ 3.64
SREBF1-214ENST00000486311 EEA1Q15075 1411 aa37.77■■■■□ 3.64
SREBF1-214ENST00000486311 WDR7Q9Y4E6 1490 aa37.76■■■■□ 3.63
SREBF1-214ENST00000486311 MAP3K4Q9Y6R4 1608 aa37.72■■■■□ 3.63
SREBF1-214ENST00000486311 TEX14Q8IWB6 1497 aa37.66■■■■□ 3.62
SREBF1-214ENST00000486311 P3H3Q8IVL6 736 aa37.66■■■■□ 3.62
SREBF1-214ENST00000486311 FAM9AQ8IZU1 332 aaPredicted RBP37.66■■■■□ 3.62
SREBF1-214ENST00000486311 KDM4FA0A1W2PPD8 638 aa37.61■■■■□ 3.61
SREBF1-214ENST00000486311 COL17A1Q9UMD9 1497 aaPredicted RBP37.6■■■■□ 3.61
SREBF1-214ENST00000486311 SAMD9Q5K651 1589 aa37.59■■■■□ 3.61
SREBF1-214ENST00000486311 KCNH8Q96L42 1107 aa37.57■■■■□ 3.6
SREBF1-214ENST00000486311 CD109Q6YHK3 1445 aa37.53■■■■□ 3.6
SREBF1-214ENST00000486311 ATP10BO94823 1461 aa37.52■■■■□ 3.6
SREBF1-214ENST00000486311 MAGI3Q5TCQ9 1506 aa37.5■■■■□ 3.59
SREBF1-214ENST00000486311 ARID3CA6NKF2 412 aa37.49■■■■□ 3.59
SREBF1-214ENST00000486311 CFAP43Q8NDM7 1665 aa37.44■■■■□ 3.58
SREBF1-214ENST00000486311 RANGAP1P46060 587 aaPredicted RBP37.4■■■■□ 3.58
SREBF1-214ENST00000486311 KIF21BO75037 1637 aa37.39■■■■□ 3.58
SREBF1-214ENST00000486311 RAPGEF6Q8TEU7 1601 aa37.38■■■■□ 3.57
SREBF1-214ENST00000486311 FHOD3Q2V2M9 1422 aa37.36■■■■□ 3.57
SREBF1-214ENST00000486311 CHIC1Q5VXU3 224 aa37.34■■■■□ 3.57
SREBF1-214ENST00000486311 NUP153P49790 1475 aaKnown RBP37.31■■■■□ 3.56
SREBF1-214ENST00000486311 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.27■■■■□ 3.56
SREBF1-214ENST00000486311 HNRNPUL2Q1KMD3 747 aaKnown RBP37.27■■■■□ 3.56
SREBF1-214ENST00000486311 ADGRL1O94910 1474 aa37.26■■■■□ 3.56
SREBF1-214ENST00000486311 EFCAB5A4FU69 1503 aa37.26■■■■□ 3.56
SREBF1-214ENST00000486311 ABCA9Q8IUA7 1624 aa37.22■■■■□ 3.55
SREBF1-214ENST00000486311 ARAP3Q8WWN8 1544 aa37.2■■■■□ 3.55
SREBF1-214ENST00000486311 PHLDB1Q86UU1 1377 aa37.17■■■■□ 3.54
SREBF1-214ENST00000486311 UBTFP17480 764 aaKnown RBP37.14■■■■□ 3.54
SREBF1-214ENST00000486311 PLEKHD1A6NEE1 506 aa37.11■■■■□ 3.53
SREBF1-214ENST00000486311 EHMT2Q96KQ7 1210 aa37.1■■■■□ 3.53
SREBF1-214ENST00000486311 NEO1Q92859 1461 aa37.08■■■■□ 3.53
SREBF1-214ENST00000486311 RAPGEF3O95398 923 aa36.98■■■■□ 3.51
SREBF1-214ENST00000486311 ARHGAP35Q9NRY4 1499 aa36.97■■■■□ 3.51
SREBF1-214ENST00000486311 FMN1Q68DA7 1419 aa36.96■■■■□ 3.51
SREBF1-214ENST00000486311 CDK13Q14004 1512 aaKnown RBP36.92■■■■□ 3.5
SREBF1-214ENST00000486311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.9■■■■□ 3.53e-8■□□□□ 10.1
SREBF1-214ENST00000486311 AKNAQ7Z591 1439 aa36.85■■■■□ 3.49
SREBF1-214ENST00000486311 FRMPD1Q5SYB0 1578 aa36.84■■■■□ 3.49
SREBF1-214ENST00000486311 FANCAO15360 1455 aa36.84■■■■□ 3.49
SREBF1-214ENST00000486311 ATP1B4Q9UN42 357 aaPredicted RBP36.84■■■■□ 3.49
SREBF1-214ENST00000486311 TTC37Q6PGP7 1564 aa36.83■■■■□ 3.49
SREBF1-214ENST00000486311 HECW1Q76N89 1606 aa36.82■■■■□ 3.49
SREBF1-214ENST00000486311 DENND4BO75064 1496 aaPredicted RBP36.82■■■■□ 3.48
SREBF1-214ENST00000486311 HECW2Q9P2P5 1572 aa36.81■■■■□ 3.48
SREBF1-214ENST00000486311 CFAP74Q9C0B2 1584 aa36.76■■■■□ 3.48
SREBF1-214ENST00000486311 CDK11AQ9UQ88 783 aaPredicted RBP36.76■■■■□ 3.48
SREBF1-214ENST00000486311 PLCH2O75038 1416 aa36.73■■■■□ 3.47
SREBF1-214ENST00000486311 RICTORQ6R327 1708 aa36.67■■■■□ 3.46
SREBF1-214ENST00000486311 ARHGEF40Q8TER5 1519 aa36.65■■■■□ 3.46
SREBF1-214ENST00000486311 TROQ12816 1431 aaPredicted RBP36.65■■■■□ 3.46
SREBF1-214ENST00000486311 ARID4BQ4LE39 1312 aaPredicted RBP36.63■■■■□ 3.45
SREBF1-214ENST00000486311 ADAMTSL3P82987 1691 aa36.63■■■■□ 3.45
SREBF1-214ENST00000486311 ZMYM4Q5VZL5 1548 aa36.62■■■■□ 3.45
SREBF1-214ENST00000486311 ILDR1Q86SU0 546 aaPredicted RBP36.61■■■■□ 3.45
SREBF1-214ENST00000486311 SCAPERQ9BY12 1400 aa36.6■■■■□ 3.45
SREBF1-214ENST00000486311 EFCAB2Q5VUJ9 269 aa36.6■■■■□ 3.45
SREBF1-214ENST00000486311 CASKIN1Q8WXD9 1431 aa36.59■■■■□ 3.45
SREBF1-214ENST00000486311 PTPRMP28827 1452 aa36.58■■■■□ 3.45
SREBF1-214ENST00000486311 CLIP1P30622 1438 aa36.58■■■■□ 3.45
SREBF1-214ENST00000486311 MAGI2Q86UL8 1455 aa36.57■■■■□ 3.45
SREBF1-214ENST00000486311 POGZQ7Z3K3 1410 aa36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms