RNA–Protein interactions for RNA: ENST00000485946.1

PCCA-209, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2

Gene PCCA, Length 1,789 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-209ENST00000485946 POTEGQ6S5H5 508 aa9.83□□□□□ -0.84
PCCA-209ENST00000485946 SMARCA2P51531 1590 aa9.82□□□□□ -0.84
PCCA-209ENST00000485946 HRCP23327 699 aa9.82□□□□□ -0.84
PCCA-209ENST00000485946 UBTFP17480 764 aaKnown RBP9.8□□□□□ -0.84
PCCA-209ENST00000485946 TRHP20396 242 aaPredicted RBP9.8□□□□□ -0.84
PCCA-209ENST00000485946 ZNF219Q9P2Y4 722 aaPredicted RBP9.8□□□□□ -0.84
PCCA-209ENST00000485946 PEG3Q9GZU2 1588 aa9.79□□□□□ -0.84
PCCA-209ENST00000485946 HMGXB3Q12766 1538 aa9.79□□□□□ -0.84
PCCA-209ENST00000485946 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
PCCA-209ENST00000485946 SAMD1Q6SPF0 538 aaPredicted RBP9.77□□□□□ -0.85
PCCA-209ENST00000485946 LOC105371045A0A1W2PR82 267 aa9.75□□□□□ -0.85
PCCA-209ENST00000485946 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
PCCA-209ENST00000485946 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
PCCA-209ENST00000485946 FOXD4L1Q9NU39 408 aa9.74□□□□□ -0.85
PCCA-209ENST00000485946 ATAD2BQ9ULI0 1458 aa9.73□□□□□ -0.85
PCCA-209ENST00000485946 ABCB7O75027 752 aa9.73□□□□□ -0.85
PCCA-209ENST00000485946 BAZ1BQ9UIG0 1483 aaKnown RBP9.67□□□□□ -0.86
PCCA-209ENST00000485946 MYCNP04198 464 aaPredicted RBP9.65□□□□□ -0.87
PCCA-209ENST00000485946 MROH2BQ7Z745 1585 aa9.65□□□□□ -0.87
PCCA-209ENST00000485946 EVX2Q03828 476 aa9.62□□□□□ -0.87
PCCA-209ENST00000485946 NBR1Q14596 966 aa9.61□□□□□ -0.87
PCCA-209ENST00000485946 LAMC3Q9Y6N6 1575 aa9.61□□□□□ -0.87
PCCA-209ENST00000485946 WIZO95785 1651 aa9.58□□□□□ -0.88
PCCA-209ENST00000485946 PAXIP1Q6ZW49 1069 aaPredicted RBP9.56□□□□□ -0.88
PCCA-209ENST00000485946 PRDM2Q13029 1718 aa9.55□□□□□ -0.88
PCCA-209ENST00000485946 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
PCCA-209ENST00000485946 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.53□□□□□ -0.88
PCCA-209ENST00000485946 TOP2AP11388 1531 aaKnown RBP9.53□□□□□ -0.88
PCCA-209ENST00000485946 POLA2Q14181 598 aa9.52□□□□□ -0.88
PCCA-209ENST00000485946 CUX2O14529 1486 aa9.52□□□□□ -0.89
PCCA-209ENST00000485946 RSF1Q96T23 1441 aaPredicted RBP9.52□□□□□ -0.89
PCCA-209ENST00000485946 GABBR2O75899 941 aa9.52□□□□□ -0.89
PCCA-209ENST00000485946 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
PCCA-209ENST00000485946 BBXQ8WY36 941 aaPredicted RBP9.51□□□□□ -0.89
PCCA-209ENST00000485946 TSHZ2Q9NRE2 1034 aa9.51□□□□□ -0.89
PCCA-209ENST00000485946 ERCC6Q03468 1493 aa9.5□□□□□ -0.89
PCCA-209ENST00000485946 PDS5BQ9NTI5 1447 aa9.48□□□□□ -0.89
PCCA-209ENST00000485946 KIF21AQ7Z4S6 1674 aa9.47□□□□□ -0.89
PCCA-209ENST00000485946 CCDC9Q9Y3X0 531 aaKnown RBP9.47□□□□□ -0.89
PCCA-209ENST00000485946 CADPSQ9ULU8 1353 aa9.45□□□□□ -0.9
PCCA-209ENST00000485946 CDK11BP21127 795 aaKnown RBP9.45□□□□□ -0.9
PCCA-209ENST00000485946 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCCA-209ENST00000485946 CDK11AQ9UQ88 783 aaPredicted RBP9.45□□□□□ -0.9
PCCA-209ENST00000485946 THOC2Q8NI27 1593 aaKnown RBP9.44□□□□□ -0.9
PCCA-209ENST00000485946 CHMP4AQ9BY43 222 aa9.44□□□□□ -0.9
PCCA-209ENST00000485946 IGSF3O75054 1194 aa9.43□□□□□ -0.9
PCCA-209ENST00000485946 NESP48681 1621 aa9.43□□□□□ -0.9
PCCA-209ENST00000485946 PDIA4P13667 645 aaKnown RBP9.42□□□□□ -0.9
PCCA-209ENST00000485946 PKD2Q13563 968 aa9.42□□□□□ -0.9
PCCA-209ENST00000485946 AKT1S1Q96B36 256 aa9.42□□□□□ -0.9
PCCA-209ENST00000485946 NPM1P06748 294 aaKnown RBP eCLIP9.41□□□□□ -0.9
PCCA-209ENST00000485946 CFTRP13569 1480 aa9.41□□□□□ -0.9
PCCA-209ENST00000485946 ATF5Q9Y2D1 282 aaPredicted RBP9.4□□□□□ -0.91
PCCA-209ENST00000485946 HMGB1P09429 215 aaKnown RBP9.38□□□□□ -0.91
PCCA-209ENST00000485946 CEP164Q9UPV0 1460 aa9.37□□□□□ -0.91
PCCA-209ENST00000485946 WDR62O43379 1518 aa9.37□□□□□ -0.91
PCCA-209ENST00000485946 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
PCCA-209ENST00000485946 ZBTB12Q9Y330 459 aaPredicted RBP9.36□□□□□ -0.91
PCCA-209ENST00000485946 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
PCCA-209ENST00000485946 FANCD2Q9BXW9 1451 aa9.34□□□□□ -0.91
PCCA-209ENST00000485946 CCDC88BA6NC98 1476 aa9.33□□□□□ -0.92
PCCA-209ENST00000485946 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
PCCA-209ENST00000485946 SPRYD3Q8NCJ5 442 aa9.32□□□□□ -0.92
PCCA-209ENST00000485946 ZBTB7CA1YPR0 619 aa9.31□□□□□ -0.92
PCCA-209ENST00000485946 UBE2Q2Q8WVN8 375 aa9.31□□□□□ -0.92
PCCA-209ENST00000485946 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.92
PCCA-209ENST00000485946 NECTIN2Q92692 538 aa9.27□□□□□ -0.93
PCCA-209ENST00000485946 PUS7Q96PZ0 661 aaKnown RBP9.26□□□□□ -0.93
PCCA-209ENST00000485946 BRD2P25440 801 aaKnown RBP9.25□□□□□ -0.93
PCCA-209ENST00000485946 OTUD5Q96G74 571 aa9.25□□□□□ -0.93
PCCA-209ENST00000485946 ARID3AQ99856 593 aa9.24□□□□□ -0.93
PCCA-209ENST00000485946 DNMBPQ6XZF7 1577 aa9.24□□□□□ -0.93
PCCA-209ENST00000485946 ATXN8OSP0DMR3 200 aa9.24□□□□□ -0.93
PCCA-209ENST00000485946 C19orf67A6NJJ6 358 aa9.23□□□□□ -0.93
PCCA-209ENST00000485946 WDR97A6NE52 1622 aa9.23□□□□□ -0.93
PCCA-209ENST00000485946 URB2Q14146 1524 aaKnown RBP9.22□□□□□ -0.93
PCCA-209ENST00000485946 ZMYND15Q9H091 742 aa9.22□□□□□ -0.93
PCCA-209ENST00000485946 DHX37Q8IY37 1157 aaKnown RBP9.21□□□□□ -0.94
PCCA-209ENST00000485946 BCL11AQ9H165 835 aa9.21□□□□□ -0.94
PCCA-209ENST00000485946 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
PCCA-209ENST00000485946 OSCARQ8IYS5 282 aa9.2□□□□□ -0.94
PCCA-209ENST00000485946 RSPH6AQ9H0K4 717 aa9.2□□□□□ -0.94
PCCA-209ENST00000485946 IFT140Q96RY7 1462 aa9.2□□□□□ -0.94
PCCA-209ENST00000485946 TOPBP1Q92547 1522 aa9.19□□□□□ -0.94
PCCA-209ENST00000485946 REM2Q8IYK8 340 aaPredicted RBP9.18□□□□□ -0.94
PCCA-209ENST00000485946 C1orf115Q9H7X2 142 aa9.18□□□□□ -0.94
PCCA-209ENST00000485946 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
PCCA-209ENST00000485946 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
PCCA-209ENST00000485946 TARBP1Q13395 1621 aaKnown RBP9.14□□□□□ -0.95
PCCA-209ENST00000485946 CLCN6P51797 869 aa9.13□□□□□ -0.95
PCCA-209ENST00000485946 PDE4CQ08493 712 aa9.13□□□□□ -0.95
PCCA-209ENST00000485946 BIVM-ERCC5R4GMW8 1640 aa9.11□□□□□ -0.95
PCCA-209ENST00000485946 EIF4G3O43432 1585 aaKnown RBP9.11□□□□□ -0.95
PCCA-209ENST00000485946 TAF7LQ5H9L4 462 aa9.1□□□□□ -0.95
PCCA-209ENST00000485946 POLA1P09884 1462 aaPredicted RBP9.1□□□□□ -0.95
PCCA-209ENST00000485946 TOP2BQ02880 1626 aa9.07□□□□□ -0.96
PCCA-209ENST00000485946 CUX1P39880 1505 aa9.07□□□□□ -0.96
PCCA-209ENST00000485946 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
PCCA-209ENST00000485946 KCTD17Q8N5Z5 321 aa9.07□□□□□ -0.96
PCCA-209ENST00000485946 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms