RNA–Protein interactions for RNA: ENST00000485744.5

HMCN1-204, Transcript of hemicentin 1, humanhuman

TSL 2

Gene HMCN1, Length 1,884 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-204ENST00000485744 NUP160Q12769 1436 aa16.76■□□□□ 0.27
HMCN1-204ENST00000485744 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
HMCN1-204ENST00000485744 IQGAP2Q13576 1575 aa16.71■□□□□ 0.27
HMCN1-204ENST00000485744 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
HMCN1-204ENST00000485744 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
HMCN1-204ENST00000485744 KIAA0586Q9BVV6 1533 aa16.7■□□□□ 0.26
HMCN1-204ENST00000485744 TNIKQ9UKE5 1360 aa16.7■□□□□ 0.26
HMCN1-204ENST00000485744 SHROOM2Q13796 1616 aa16.63■□□□□ 0.25
HMCN1-204ENST00000485744 CEP162Q5TB80 1403 aa16.62■□□□□ 0.25
HMCN1-204ENST00000485744 JPH4Q96JJ6 628 aa16.61■□□□□ 0.25
HMCN1-204ENST00000485744 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
HMCN1-204ENST00000485744 UGGT2Q9NYU1 1516 aa16.59■□□□□ 0.25
HMCN1-204ENST00000485744 P3H3Q8IVL6 736 aa16.59■□□□□ 0.25
HMCN1-204ENST00000485744 CLIP1P30622 1438 aa16.58■□□□□ 0.24
HMCN1-204ENST00000485744 PRG4Q92954 1404 aaPredicted RBP16.57■□□□□ 0.24
HMCN1-204ENST00000485744 DISP1Q96F81 1524 aa16.57■□□□□ 0.24
HMCN1-204ENST00000485744 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
HMCN1-204ENST00000485744 ARHGAP35Q9NRY4 1499 aa16.56■□□□□ 0.24
HMCN1-204ENST00000485744 KIAA0556O60303 1618 aa16.56■□□□□ 0.24
HMCN1-204ENST00000485744 TTBK1Q5TCY1 1321 aaPredicted RBP16.53■□□□□ 0.24
HMCN1-204ENST00000485744 FHOD3Q2V2M9 1422 aa16.52■□□□□ 0.24
HMCN1-204ENST00000485744 EFCAB5A4FU69 1503 aa16.52■□□□□ 0.24
HMCN1-204ENST00000485744 ARAP1Q96P48 1450 aa16.52■□□□□ 0.23
HMCN1-204ENST00000485744 CARMIL2Q6F5E8 1435 aa16.49■□□□□ 0.23
HMCN1-204ENST00000485744 ARHGEF11O15085 1522 aa16.48■□□□□ 0.23
HMCN1-204ENST00000485744 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
HMCN1-204ENST00000485744 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
HMCN1-204ENST00000485744 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
HMCN1-204ENST00000485744 PTPRGP23470 1445 aa16.39■□□□□ 0.21
HMCN1-204ENST00000485744 PLB1Q6P1J6 1458 aa16.38■□□□□ 0.21
HMCN1-204ENST00000485744 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
HMCN1-204ENST00000485744 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
HMCN1-204ENST00000485744 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
HMCN1-204ENST00000485744 LRRIQ1Q96JM4 1722 aa16.35■□□□□ 0.21
HMCN1-204ENST00000485744 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
HMCN1-204ENST00000485744 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
HMCN1-204ENST00000485744 ARID3CA6NKF2 412 aa16.33■□□□□ 0.21
HMCN1-204ENST00000485744 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.21
HMCN1-204ENST00000485744 ABCA8O94911 1581 aa16.33■□□□□ 0.2
HMCN1-204ENST00000485744 CYB5RLQ6IPT4 315 aa16.33■□□□□ 0.2
HMCN1-204ENST00000485744 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
HMCN1-204ENST00000485744 CASKIN1Q8WXD9 1431 aa16.29■□□□□ 0.2
HMCN1-204ENST00000485744 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
HMCN1-204ENST00000485744 NUP153P49790 1475 aaKnown RBP16.29■□□□□ 0.2
HMCN1-204ENST00000485744 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
HMCN1-204ENST00000485744 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
HMCN1-204ENST00000485744 ABCC2Q92887 1545 aa16.27■□□□□ 0.2
HMCN1-204ENST00000485744 CDK13Q14004 1512 aaKnown RBP16.26■□□□□ 0.19
HMCN1-204ENST00000485744 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
HMCN1-204ENST00000485744 UHRF1BP1LA0JNW5 1464 aa16.22■□□□□ 0.19
HMCN1-204ENST00000485744 ZCCHC11Q5TAX3 1644 aaKnown RBP16.22■□□□□ 0.19
HMCN1-204ENST00000485744 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
HMCN1-204ENST00000485744 ATP10BO94823 1461 aa16.2■□□□□ 0.18
HMCN1-204ENST00000485744 PPARGC1BQ86YN6 1023 aaKnown RBP16.2■□□□□ 0.18
HMCN1-204ENST00000485744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
HMCN1-204ENST00000485744 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
HMCN1-204ENST00000485744 TIAM1Q13009 1591 aa16.19■□□□□ 0.18
HMCN1-204ENST00000485744 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
HMCN1-204ENST00000485744 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
HMCN1-204ENST00000485744 MAGI3Q5TCQ9 1506 aa16.16■□□□□ 0.18
HMCN1-204ENST00000485744 KANK4Q5T7N3 995 aaPredicted RBP16.15■□□□□ 0.18
HMCN1-204ENST00000485744 APLP2Q06481 763 aa16.14■□□□□ 0.17
HMCN1-204ENST00000485744 MAP3K1Q13233 1512 aa16.11■□□□□ 0.17
HMCN1-204ENST00000485744 NPM1P06748 294 aaKnown RBP eCLIP16.1■□□□□ 0.17
HMCN1-204ENST00000485744 LRRC9Q6ZRR7 1453 aa16.09■□□□□ 0.17
HMCN1-204ENST00000485744 ASXL2Q76L83 1435 aa16.08■□□□□ 0.16
HMCN1-204ENST00000485744 MTUS2Q5JR59 1369 aa16.08■□□□□ 0.16
HMCN1-204ENST00000485744 KIF14Q15058 1648 aa16.08■□□□□ 0.16
HMCN1-204ENST00000485744 PLEKHD1A6NEE1 506 aa16.06■□□□□ 0.16
HMCN1-204ENST00000485744 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
HMCN1-204ENST00000485744 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
HMCN1-204ENST00000485744 EHBP1L1Q8N3D4 1523 aa16.05■□□□□ 0.16
HMCN1-204ENST00000485744 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
HMCN1-204ENST00000485744 WDR7Q9Y4E6 1490 aa16.05■□□□□ 0.16
HMCN1-204ENST00000485744 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
HMCN1-204ENST00000485744 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
HMCN1-204ENST00000485744 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
HMCN1-204ENST00000485744 NCOA2Q15596 1464 aa15.99■□□□□ 0.15
HMCN1-204ENST00000485744 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMCN1-204ENST00000485744 KIF13AQ9H1H9 1805 aa15.98■□□□□ 0.15
HMCN1-204ENST00000485744 DIP2BQ9P265 1576 aa15.96■□□□□ 0.15
HMCN1-204ENST00000485744 CDC42BPAQ5VT25 1732 aa15.96■□□□□ 0.15
HMCN1-204ENST00000485744 PHLDB1Q86UU1 1377 aa15.95■□□□□ 0.14
HMCN1-204ENST00000485744 ABCC10Q5T3U5 1492 aa15.95■□□□□ 0.14
HMCN1-204ENST00000485744 ABCA9Q8IUA7 1624 aa15.94■□□□□ 0.14
HMCN1-204ENST00000485744 TSPOAP1O95153 1857 aa15.93■□□□□ 0.14
HMCN1-204ENST00000485744 MYO5CQ9NQX4 1742 aa15.93■□□□□ 0.14
HMCN1-204ENST00000485744 CDC42BPBQ9Y5S2 1711 aa15.92■□□□□ 0.14
HMCN1-204ENST00000485744 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
HMCN1-204ENST00000485744 CCNB3Q8WWL7 1395 aa15.9■□□□□ 0.14
HMCN1-204ENST00000485744 GPATCH8Q9UKJ3 1502 aaKnown RBP15.9■□□□□ 0.14
HMCN1-204ENST00000485744 PREX2Q70Z35 1606 aa15.89■□□□□ 0.13
HMCN1-204ENST00000485744 MAP3K4Q9Y6R4 1608 aa15.89■□□□□ 0.13
HMCN1-204ENST00000485744 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
HMCN1-204ENST00000485744 GLI2P10070 1586 aa15.88■□□□□ 0.13
HMCN1-204ENST00000485744 MYOM3Q5VTT5 1437 aa15.88■□□□□ 0.13
HMCN1-204ENST00000485744 CD109Q6YHK3 1445 aa15.86■□□□□ 0.13
HMCN1-204ENST00000485744 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
HMCN1-204ENST00000485744 ARHGAP5Q13017 1502 aa15.85■□□□□ 0.13
HMCN1-204ENST00000485744 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms