RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 RUSC2Q8N2Y8 1516 aa33.66■■■□□ 2.98
COL27A1-205ENST00000485397 KIAA0586Q9BVV6 1533 aa33.53■■■□□ 2.96
COL27A1-205ENST00000485397 CUL7Q14999 1698 aa33.52■■■□□ 2.96
COL27A1-205ENST00000485397 CARMIL1Q5VZK9 1371 aa33.46■■■□□ 2.95
COL27A1-205ENST00000485397 NPM1P06748 294 aaKnown RBP eCLIP33.4■■■□□ 2.94
COL27A1-205ENST00000485397 KIF13AQ9H1H9 1805 aa33.38■■■□□ 2.93
COL27A1-205ENST00000485397 ADCY10Q96PN6 1610 aa33.35■■■□□ 2.93
COL27A1-205ENST00000485397 FAM69CQ0P6D2 419 aa33.32■■■□□ 2.92
COL27A1-205ENST00000485397 ABCC10Q5T3U5 1492 aa33.3■■■□□ 2.92
COL27A1-205ENST00000485397 MAPKBP1O60336 1514 aa33.28■■■□□ 2.92
COL27A1-205ENST00000485397 AEBP2Q6ZN18 517 aaPredicted RBP33.28■■■□□ 2.92
COL27A1-205ENST00000485397 TTBK1Q5TCY1 1321 aaPredicted RBP33.26■■■□□ 2.91
COL27A1-205ENST00000485397 PTPRGP23470 1445 aa33.25■■■□□ 2.91
COL27A1-205ENST00000485397 CARMIL2Q6F5E8 1435 aa33.19■■■□□ 2.9
COL27A1-205ENST00000485397 IQGAP2Q13576 1575 aa33.18■■■□□ 2.9
COL27A1-205ENST00000485397 DIP2BQ9P265 1576 aa33.18■■■□□ 2.9
COL27A1-205ENST00000485397 TNIKQ9UKE5 1360 aa33.18■■■□□ 2.9
COL27A1-205ENST00000485397 RAPGEF2Q9Y4G8 1499 aa33.12■■■□□ 2.89
COL27A1-205ENST00000485397 DISP1Q96F81 1524 aa33.07■■■□□ 2.88
COL27A1-205ENST00000485397 ABCC2Q92887 1545 aa33.03■■■□□ 2.88
COL27A1-205ENST00000485397 UACAQ9BZF9 1416 aa32.99■■■□□ 2.87
COL27A1-205ENST00000485397 UGGT2Q9NYU1 1516 aa32.98■■■□□ 2.87
COL27A1-205ENST00000485397 UHRF1BP1LA0JNW5 1464 aa32.97■■■□□ 2.87
COL27A1-205ENST00000485397 TSPOAP1O95153 1857 aa32.96■■■□□ 2.87
COL27A1-205ENST00000485397 ASXL2Q76L83 1435 aa32.95■■■□□ 2.87
COL27A1-205ENST00000485397 PLB1Q6P1J6 1458 aa32.9■■■□□ 2.86
COL27A1-205ENST00000485397 KDM6BO15054 1643 aa32.89■■■□□ 2.86
COL27A1-205ENST00000485397 KIAA0556O60303 1618 aa32.89■■■□□ 2.86
COL27A1-205ENST00000485397 KDM5BQ9UGL1 1544 aa32.83■■■□□ 2.85
COL27A1-205ENST00000485397 GLI2P10070 1586 aa32.81■■■□□ 2.84
COL27A1-205ENST00000485397 PRXQ9BXM0 1461 aa32.79■■■□□ 2.84
COL27A1-205ENST00000485397 CTTNBP2Q8WZ74 1663 aa32.78■■■□□ 2.84
COL27A1-205ENST00000485397 ZCCHC11Q5TAX3 1644 aaKnown RBP32.74■■■□□ 2.83
COL27A1-205ENST00000485397 EPRSP07814 1512 aaKnown RBP32.74■■■□□ 2.83
COL27A1-205ENST00000485397 PPRC1Q5VV67 1664 aaKnown RBP32.73■■■□□ 2.83
COL27A1-205ENST00000485397 GOLGA3Q08378 1498 aa32.7■■■□□ 2.83
COL27A1-205ENST00000485397 KDM4FA0A1W2PPD8 638 aa32.66■■■□□ 2.82
COL27A1-205ENST00000485397 MAP3K4Q9Y6R4 1608 aa32.62■■■□□ 2.81
COL27A1-205ENST00000485397 WDR7Q9Y4E6 1490 aa32.61■■■□□ 2.81
COL27A1-205ENST00000485397 ABCA8O94911 1581 aa32.6■■■□□ 2.81
COL27A1-205ENST00000485397 COL17A1Q9UMD9 1497 aaPredicted RBP32.59■■■□□ 2.81
COL27A1-205ENST00000485397 CSRNP3Q8WYN3 585 aa32.58■■■□□ 2.81
COL27A1-205ENST00000485397 P3H3Q8IVL6 736 aa32.55■■■□□ 2.8
COL27A1-205ENST00000485397 TEX14Q8IWB6 1497 aa32.54■■■□□ 2.8
COL27A1-205ENST00000485397 KCNH8Q96L42 1107 aa32.52■■■□□ 2.8
COL27A1-205ENST00000485397 ARID3CA6NKF2 412 aa32.46■■■□□ 2.79
COL27A1-205ENST00000485397 CD109Q6YHK3 1445 aa32.43■■■□□ 2.78
COL27A1-205ENST00000485397 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
COL27A1-205ENST00000485397 MAGI3Q5TCQ9 1506 aa32.38■■■□□ 2.77
COL27A1-205ENST00000485397 ATP10BO94823 1461 aa32.37■■■□□ 2.77
COL27A1-205ENST00000485397 CFAP43Q8NDM7 1665 aa32.37■■■□□ 2.77
COL27A1-205ENST00000485397 EEA1Q15075 1411 aa32.35■■■□□ 2.77
COL27A1-205ENST00000485397 SAMD9Q5K651 1589 aa32.35■■■□□ 2.77
COL27A1-205ENST00000485397 ADGRL1O94910 1474 aa32.35■■■□□ 2.77
COL27A1-205ENST00000485397 RANGAP1P46060 587 aaPredicted RBP32.32■■■□□ 2.76
COL27A1-205ENST00000485397 RAPGEF6Q8TEU7 1601 aa32.23■■■□□ 2.75
COL27A1-205ENST00000485397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.21■■■□□ 2.75
COL27A1-205ENST00000485397 HNRNPUL2Q1KMD3 747 aaKnown RBP32.21■■■□□ 2.75
COL27A1-205ENST00000485397 FHOD3Q2V2M9 1422 aa32.2■■■□□ 2.75
COL27A1-205ENST00000485397 NUP153P49790 1475 aaKnown RBP32.16■■■□□ 2.74
COL27A1-205ENST00000485397 ABCA9Q8IUA7 1624 aa32.14■■■□□ 2.74
COL27A1-205ENST00000485397 ARAP3Q8WWN8 1544 aa32.12■■■□□ 2.73
COL27A1-205ENST00000485397 KIF21BO75037 1637 aa32.1■■■□□ 2.73
COL27A1-205ENST00000485397 EHMT2Q96KQ7 1210 aa32.05■■■□□ 2.72
COL27A1-205ENST00000485397 PHLDB1Q86UU1 1377 aa32.05■■■□□ 2.72
COL27A1-205ENST00000485397 RAPGEF3O95398 923 aa32.02■■■□□ 2.72
COL27A1-205ENST00000485397 EFCAB5A4FU69 1503 aa32.01■■■□□ 2.72
COL27A1-205ENST00000485397 PLEKHD1A6NEE1 506 aa32.01■■■□□ 2.71
COL27A1-205ENST00000485397 NEO1Q92859 1461 aa31.99■■■□□ 2.71
COL27A1-205ENST00000485397 CHIC1Q5VXU3 224 aa31.99■■■□□ 2.71
COL27A1-205ENST00000485397 UBTFP17480 764 aaKnown RBP31.96■■■□□ 2.71
COL27A1-205ENST00000485397 HECW2Q9P2P5 1572 aa31.88■■■□□ 2.69
COL27A1-205ENST00000485397 FRMPD1Q5SYB0 1578 aa31.86■■■□□ 2.69
COL27A1-205ENST00000485397 CDK13Q14004 1512 aaKnown RBP31.85■■■□□ 2.69
COL27A1-205ENST00000485397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.85■■■□□ 2.69
COL27A1-205ENST00000485397 AKNAQ7Z591 1439 aa31.82■■■□□ 2.68
COL27A1-205ENST00000485397 ATP1B4Q9UN42 357 aaPredicted RBP31.81■■■□□ 2.68
COL27A1-205ENST00000485397 FANCAO15360 1455 aa31.79■■■□□ 2.68
COL27A1-205ENST00000485397 DENND4BO75064 1496 aaPredicted RBP31.79■■■□□ 2.68
COL27A1-205ENST00000485397 ARHGAP35Q9NRY4 1499 aa31.79■■■□□ 2.68
COL27A1-205ENST00000485397 TTC37Q6PGP7 1564 aa31.79■■■□□ 2.68
COL27A1-205ENST00000485397 FMN1Q68DA7 1419 aa31.75■■■□□ 2.67
COL27A1-205ENST00000485397 ARID4BQ4LE39 1312 aaPredicted RBP31.75■■■□□ 2.67
COL27A1-205ENST00000485397 ADAMTSL3P82987 1691 aa31.73■■■□□ 2.67
COL27A1-205ENST00000485397 CFAP74Q9C0B2 1584 aa31.71■■■□□ 2.67
COL27A1-205ENST00000485397 RICTORQ6R327 1708 aa31.71■■■□□ 2.67
COL27A1-205ENST00000485397 PTPRMP28827 1452 aa31.71■■■□□ 2.67
COL27A1-205ENST00000485397 HECW1Q76N89 1606 aa31.69■■■□□ 2.66
COL27A1-205ENST00000485397 ARHGEF40Q8TER5 1519 aa31.67■■■□□ 2.66
COL27A1-205ENST00000485397 PLCH2O75038 1416 aa31.66■■■□□ 2.66
COL27A1-205ENST00000485397 BCORL1Q5H9F3 1711 aa31.66■■■□□ 2.66
COL27A1-205ENST00000485397 ILDR1Q86SU0 546 aaPredicted RBP31.66■■■□□ 2.66
COL27A1-205ENST00000485397 CDK11AQ9UQ88 783 aaPredicted RBP31.63■■■□□ 2.65
COL27A1-205ENST00000485397 SCAPERQ9BY12 1400 aa31.61■■■□□ 2.65
COL27A1-205ENST00000485397 MADDQ8WXG6 1647 aa31.6■■■□□ 2.65
COL27A1-205ENST00000485397 YEATS2Q9ULM3 1422 aa31.6■■■□□ 2.65
COL27A1-205ENST00000485397 ZMYM4Q5VZL5 1548 aa31.59■■■□□ 2.65
COL27A1-205ENST00000485397 ZFYVE16Q7Z3T8 1539 aa31.57■■■□□ 2.64
COL27A1-205ENST00000485397 EFCAB2Q5VUJ9 269 aa31.56■■■□□ 2.64
COL27A1-205ENST00000485397 KIF14Q15058 1648 aa31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms