RNA–Protein interactions for RNA: ENST00000484772.1

NUDC-204, Transcript of nuclear distribution C, dynein complex regulator, humanhuman

TSL 2

Gene NUDC, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDC-204ENST00000484772 ARAP1Q96P48 1450 aa21.14■□□□□ 0.98
NUDC-204ENST00000484772 RAPGEF2Q9Y4G8 1499 aa21.14■□□□□ 0.98
NUDC-204ENST00000484772 EEA1Q15075 1411 aa21.13■□□□□ 0.97
NUDC-204ENST00000484772 CSRNP3Q8WYN3 585 aa21.13■□□□□ 0.97
NUDC-204ENST00000484772 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
NUDC-204ENST00000484772 PRXQ9BXM0 1461 aa21.08■□□□□ 0.97
NUDC-204ENST00000484772 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
NUDC-204ENST00000484772 ERCC6L2Q5T890 1561 aa20.97■□□□□ 0.95
NUDC-204ENST00000484772 CARMIL2Q6F5E8 1435 aa20.95■□□□□ 0.95
NUDC-204ENST00000484772 IQGAP2Q13576 1575 aa20.93■□□□□ 0.94
NUDC-204ENST00000484772 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
NUDC-204ENST00000484772 TNIKQ9UKE5 1360 aa20.89■□□□□ 0.93
NUDC-204ENST00000484772 UGGT2Q9NYU1 1516 aa20.88■□□□□ 0.93
NUDC-204ENST00000484772 PTPRGP23470 1445 aa20.88■□□□□ 0.93
NUDC-204ENST00000484772 DISP1Q96F81 1524 aa20.83■□□□□ 0.93
NUDC-204ENST00000484772 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
NUDC-204ENST00000484772 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
NUDC-204ENST00000484772 KIF21BO75037 1637 aa20.75■□□□□ 0.91
NUDC-204ENST00000484772 TRHP20396 242 aaPredicted RBP20.75■□□□□ 0.91
NUDC-204ENST00000484772 UACAQ9BZF9 1416 aa20.72■□□□□ 0.91
NUDC-204ENST00000484772 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
NUDC-204ENST00000484772 KIAA0556O60303 1618 aa20.71■□□□□ 0.91
NUDC-204ENST00000484772 CTTNBP2Q8WZ74 1663 aa20.7■□□□□ 0.9
NUDC-204ENST00000484772 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
NUDC-204ENST00000484772 TTBK1Q5TCY1 1321 aaPredicted RBP20.69■□□□□ 0.9
NUDC-204ENST00000484772 ABCC2Q92887 1545 aa20.65■□□□□ 0.9
NUDC-204ENST00000484772 ADCY10Q96PN6 1610 aa20.64■□□□□ 0.89
NUDC-204ENST00000484772 MAPKBP1O60336 1514 aa20.63■□□□□ 0.89
NUDC-204ENST00000484772 P3H3Q8IVL6 736 aa20.6■□□□□ 0.89
NUDC-204ENST00000484772 KDM5BQ9UGL1 1544 aa20.58■□□□□ 0.89
NUDC-204ENST00000484772 SAMD9Q5K651 1589 aa20.58■□□□□ 0.88
NUDC-204ENST00000484772 ABCC10Q5T3U5 1492 aa20.56■□□□□ 0.88
NUDC-204ENST00000484772 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
NUDC-204ENST00000484772 EFCAB5A4FU69 1503 aa20.54■□□□□ 0.88
NUDC-204ENST00000484772 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
NUDC-204ENST00000484772 RANGAP1P46060 587 aaPredicted RBP20.53■□□□□ 0.88
NUDC-204ENST00000484772 ABCA8O94911 1581 aa20.53■□□□□ 0.88
NUDC-204ENST00000484772 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
NUDC-204ENST00000484772 ASXL2Q76L83 1435 aa20.51■□□□□ 0.87
NUDC-204ENST00000484772 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
NUDC-204ENST00000484772 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
NUDC-204ENST00000484772 FMN1Q68DA7 1419 aa20.43■□□□□ 0.86
NUDC-204ENST00000484772 ATP10BO94823 1461 aa20.43■□□□□ 0.86
NUDC-204ENST00000484772 DIP2BQ9P265 1576 aa20.41■□□□□ 0.86
NUDC-204ENST00000484772 WDR7Q9Y4E6 1490 aa20.4■□□□□ 0.86
NUDC-204ENST00000484772 GLI2P10070 1586 aa20.39■□□□□ 0.85
NUDC-204ENST00000484772 EPRSP07814 1512 aaKnown RBP20.38■□□□□ 0.85
NUDC-204ENST00000484772 ZCCHC11Q5TAX3 1644 aaKnown RBP20.38■□□□□ 0.85
NUDC-204ENST00000484772 NUP153P49790 1475 aaKnown RBP20.37■□□□□ 0.85
NUDC-204ENST00000484772 RAPGEF6Q8TEU7 1601 aa20.35■□□□□ 0.85
NUDC-204ENST00000484772 PLEKHD1A6NEE1 506 aa20.34■□□□□ 0.85
NUDC-204ENST00000484772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
NUDC-204ENST00000484772 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
NUDC-204ENST00000484772 CLIP1P30622 1438 aa20.34■□□□□ 0.85
NUDC-204ENST00000484772 KCNH8Q96L42 1107 aa20.32■□□□□ 0.84
NUDC-204ENST00000484772 ARID3CA6NKF2 412 aa20.31■□□□□ 0.84
NUDC-204ENST00000484772 KIF13AQ9H1H9 1805 aa20.31■□□□□ 0.84
NUDC-204ENST00000484772 CDK11AQ9UQ88 783 aaPredicted RBP20.28■□□□□ 0.84
NUDC-204ENST00000484772 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
NUDC-204ENST00000484772 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
NUDC-204ENST00000484772 CASKIN1Q8WXD9 1431 aa20.25■□□□□ 0.83
NUDC-204ENST00000484772 ATP1B4Q9UN42 357 aaPredicted RBP20.24■□□□□ 0.83
NUDC-204ENST00000484772 TEX14Q8IWB6 1497 aa20.23■□□□□ 0.83
NUDC-204ENST00000484772 MAGI3Q5TCQ9 1506 aa20.22■□□□□ 0.83
NUDC-204ENST00000484772 CEP162Q5TB80 1403 aa20.2■□□□□ 0.82
NUDC-204ENST00000484772 HECW1Q76N89 1606 aa20.19■□□□□ 0.82
NUDC-204ENST00000484772 MAP3K4Q9Y6R4 1608 aa20.19■□□□□ 0.82
NUDC-204ENST00000484772 PHLDB1Q86UU1 1377 aa20.19■□□□□ 0.82
NUDC-204ENST00000484772 FYCO1Q9BQS8 1478 aa20.15■□□□□ 0.82
NUDC-204ENST00000484772 CCDC18Q5T9S5 1454 aa20.14■□□□□ 0.81
NUDC-204ENST00000484772 CDK13Q14004 1512 aaKnown RBP20.13■□□□□ 0.81
NUDC-204ENST00000484772 CFAP43Q8NDM7 1665 aa20.13■□□□□ 0.81
NUDC-204ENST00000484772 ABCA9Q8IUA7 1624 aa20.12■□□□□ 0.81
NUDC-204ENST00000484772 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
NUDC-204ENST00000484772 PPRC1Q5VV67 1664 aaKnown RBP20.09■□□□□ 0.81
NUDC-204ENST00000484772 NEO1Q92859 1461 aa20.07■□□□□ 0.8
NUDC-204ENST00000484772 COL17A1Q9UMD9 1497 aaPredicted RBP20.07■□□□□ 0.8
NUDC-204ENST00000484772 KDM6BO15054 1643 aa20.07■□□□□ 0.8
NUDC-204ENST00000484772 PCF11O94913 1555 aaKnown RBP20.05■□□□□ 0.8
NUDC-204ENST00000484772 AEBP2Q6ZN18 517 aaPredicted RBP20.05■□□□□ 0.8
NUDC-204ENST00000484772 ARAP3Q8WWN8 1544 aa20.05■□□□□ 0.8
NUDC-204ENST00000484772 PLCH2O75038 1416 aa20.04■□□□□ 0.8
NUDC-204ENST00000484772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.04■□□□□ 0.8
NUDC-204ENST00000484772 TSPOAP1O95153 1857 aa20.04■□□□□ 0.8
NUDC-204ENST00000484772 EFCAB2Q5VUJ9 269 aa20.01■□□□□ 0.79
NUDC-204ENST00000484772 VPS8Q8N3P4 1428 aa20.01■□□□□ 0.79
NUDC-204ENST00000484772 FANCAO15360 1455 aa19.98■□□□□ 0.79
NUDC-204ENST00000484772 AKNAQ7Z591 1439 aa19.97■□□□□ 0.79
NUDC-204ENST00000484772 MTUS2Q5JR59 1369 aa19.95■□□□□ 0.78
NUDC-204ENST00000484772 KIF14Q15058 1648 aa19.94■□□□□ 0.78
NUDC-204ENST00000484772 TTC37Q6PGP7 1564 aa19.93■□□□□ 0.78
NUDC-204ENST00000484772 RAPGEF3O95398 923 aa19.92■□□□□ 0.78
NUDC-204ENST00000484772 DENND4BO75064 1496 aaPredicted RBP19.91■□□□□ 0.78
NUDC-204ENST00000484772 LRRIQ1Q96JM4 1722 aa19.9■□□□□ 0.78
NUDC-204ENST00000484772 CFAP74Q9C0B2 1584 aa19.88■□□□□ 0.77
NUDC-204ENST00000484772 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
NUDC-204ENST00000484772 SCAPERQ9BY12 1400 aa19.87■□□□□ 0.77
NUDC-204ENST00000484772 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
NUDC-204ENST00000484772 GPATCH8Q9UKJ3 1502 aaKnown RBP19.85■□□□□ 0.77
NUDC-204ENST00000484772 CCNB3Q8WWL7 1395 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms