RNA–Protein interactions for RNA: ENST00000484545.1

NELFA-214, Transcript of negative elongation factor complex member A, humanhuman

TSL 3

Gene NELFA, Length 556 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-214ENST00000484545 PRG4Q92954 1404 aaPredicted RBP28.6■■■□□ 2.17
NELFA-214ENST00000484545 RUSC2Q8N2Y8 1516 aa28.59■■■□□ 2.17
NELFA-214ENST00000484545 KIAA0586Q9BVV6 1533 aa28.58■■■□□ 2.17
NELFA-214ENST00000484545 TRHP20396 242 aaPredicted RBP28.52■■■□□ 2.16
NELFA-214ENST00000484545 RAPGEF2Q9Y4G8 1499 aa28.4■■■□□ 2.14
NELFA-214ENST00000484545 IQGAP2Q13576 1575 aa28.28■■■□□ 2.12
NELFA-214ENST00000484545 CARMIL2Q6F5E8 1435 aa28.27■■■□□ 2.12
NELFA-214ENST00000484545 PRXQ9BXM0 1461 aa28.25■■■□□ 2.11
NELFA-214ENST00000484545 PTPRGP23470 1445 aa28.23■■■□□ 2.11
NELFA-214ENST00000484545 TNIKQ9UKE5 1360 aa28.22■■■□□ 2.11
NELFA-214ENST00000484545 NPM1P06748 294 aaKnown RBP eCLIP28.2■■■□□ 2.1
NELFA-214ENST00000484545 UGGT2Q9NYU1 1516 aa28.18■■■□□ 2.1
NELFA-214ENST00000484545 DISP1Q96F81 1524 aa28.17■■■□□ 2.1
NELFA-214ENST00000484545 CSRNP3Q8WYN3 585 aa28.16■■■□□ 2.1
NELFA-214ENST00000484545 ADCY10Q96PN6 1610 aa28.14■■■□□ 2.1
NELFA-214ENST00000484545 EEA1Q15075 1411 aa28.1■■■□□ 2.09
NELFA-214ENST00000484545 TTBK1Q5TCY1 1321 aaPredicted RBP28.09■■■□□ 2.09
NELFA-214ENST00000484545 MAPKBP1O60336 1514 aa28.08■■■□□ 2.09
NELFA-214ENST00000484545 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
NELFA-214ENST00000484545 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
NELFA-214ENST00000484545 UACAQ9BZF9 1416 aa28.02■■■□□ 2.08
NELFA-214ENST00000484545 CTTNBP2Q8WZ74 1663 aa28.02■■■□□ 2.08
NELFA-214ENST00000484545 KIAA0556O60303 1618 aa28.02■■■□□ 2.08
NELFA-214ENST00000484545 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
NELFA-214ENST00000484545 ABCC2Q92887 1545 aa28■■■□□ 2.07
NELFA-214ENST00000484545 FAM69CQ0P6D2 419 aa27.99■■■□□ 2.07
NELFA-214ENST00000484545 GOLGA3Q08378 1498 aa27.99■■■□□ 2.07
NELFA-214ENST00000484545 KIF13AQ9H1H9 1805 aa27.94■■■□□ 2.06
NELFA-214ENST00000484545 FAM9AQ8IZU1 332 aaPredicted RBP27.91■■■□□ 2.06
NELFA-214ENST00000484545 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
NELFA-214ENST00000484545 KDM5BQ9UGL1 1544 aa27.89■■■□□ 2.06
NELFA-214ENST00000484545 PLB1Q6P1J6 1458 aa27.86■■■□□ 2.05
NELFA-214ENST00000484545 ASXL2Q76L83 1435 aa27.85■■■□□ 2.05
NELFA-214ENST00000484545 ABCA8O94911 1581 aa27.77■■■□□ 2.04
NELFA-214ENST00000484545 P3H3Q8IVL6 736 aa27.77■■■□□ 2.04
NELFA-214ENST00000484545 KIF21BO75037 1637 aa27.76■■■□□ 2.03
NELFA-214ENST00000484545 GLI2P10070 1586 aa27.73■■■□□ 2.03
NELFA-214ENST00000484545 ZCCHC11Q5TAX3 1644 aaKnown RBP27.73■■■□□ 2.03
NELFA-214ENST00000484545 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
NELFA-214ENST00000484545 EPRSP07814 1512 aaKnown RBP27.69■■■□□ 2.02
NELFA-214ENST00000484545 WDR7Q9Y4E6 1490 aa27.64■■■□□ 2.02
NELFA-214ENST00000484545 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
NELFA-214ENST00000484545 UBTFP17480 764 aaKnown RBP27.6■■■□□ 2.01
NELFA-214ENST00000484545 ATP10BO94823 1461 aa27.59■■■□□ 2.01
NELFA-214ENST00000484545 TSPOAP1O95153 1857 aa27.56■■■□□ 2
NELFA-214ENST00000484545 FHOD3Q2V2M9 1422 aa27.56■■■□□ 2
NELFA-214ENST00000484545 EFCAB5A4FU69 1503 aa27.56■■■□□ 2
NELFA-214ENST00000484545 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
NELFA-214ENST00000484545 KDM6BO15054 1643 aa27.53■■■□□ 2
NELFA-214ENST00000484545 KCNH8Q96L42 1107 aa27.53■■■□□ 2
NELFA-214ENST00000484545 PPRC1Q5VV67 1664 aaKnown RBP27.52■■■□□ 2
NELFA-214ENST00000484545 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
NELFA-214ENST00000484545 RAPGEF6Q8TEU7 1601 aa27.52■■■□□ 2
NELFA-214ENST00000484545 ARID3CA6NKF2 412 aa27.51■■□□□ 1.99
NELFA-214ENST00000484545 TEX14Q8IWB6 1497 aa27.49■■□□□ 1.99
NELFA-214ENST00000484545 NUP153P49790 1475 aaKnown RBP27.47■■□□□ 1.99
NELFA-214ENST00000484545 CD109Q6YHK3 1445 aa27.46■■□□□ 1.99
NELFA-214ENST00000484545 MAGI3Q5TCQ9 1506 aa27.43■■□□□ 1.98
NELFA-214ENST00000484545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.41■■□□□ 1.98
NELFA-214ENST00000484545 HNRNPUL2Q1KMD3 747 aaKnown RBP27.41■■□□□ 1.98
NELFA-214ENST00000484545 COL17A1Q9UMD9 1497 aaPredicted RBP27.4■■□□□ 1.98
NELFA-214ENST00000484545 CFAP43Q8NDM7 1665 aa27.4■■□□□ 1.98
NELFA-214ENST00000484545 ARHGAP35Q9NRY4 1499 aa27.39■■□□□ 1.98
NELFA-214ENST00000484545 FMN1Q68DA7 1419 aa27.34■■□□□ 1.97
NELFA-214ENST00000484545 PLEKHD1A6NEE1 506 aa27.34■■□□□ 1.97
NELFA-214ENST00000484545 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
NELFA-214ENST00000484545 ABCA9Q8IUA7 1624 aa27.3■■□□□ 1.96
NELFA-214ENST00000484545 PHLDB1Q86UU1 1377 aa27.24■■□□□ 1.95
NELFA-214ENST00000484545 ARAP3Q8WWN8 1544 aa27.21■■□□□ 1.95
NELFA-214ENST00000484545 ATP1B4Q9UN42 357 aaPredicted RBP27.2■■□□□ 1.94
NELFA-214ENST00000484545 CDK13Q14004 1512 aaKnown RBP27.2■■□□□ 1.94
NELFA-214ENST00000484545 HECW1Q76N89 1606 aa27.17■■□□□ 1.94
NELFA-214ENST00000484545 KDM4FA0A1W2PPD8 638 aa27.17■■□□□ 1.94
NELFA-214ENST00000484545 NEO1Q92859 1461 aa27.17■■□□□ 1.94
NELFA-214ENST00000484545 CDK11AQ9UQ88 783 aaPredicted RBP27.15■■□□□ 1.94
NELFA-214ENST00000484545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.12■■□□□ 1.93
NELFA-214ENST00000484545 CLIP1P30622 1438 aa27.11■■□□□ 1.93
NELFA-214ENST00000484545 CASKIN1Q8WXD9 1431 aa27.09■■□□□ 1.93
NELFA-214ENST00000484545 RAPGEF3O95398 923 aa27.05■■□□□ 1.92
NELFA-214ENST00000484545 TROQ12816 1431 aaPredicted RBP27.03■■□□□ 1.92
NELFA-214ENST00000484545 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
NELFA-214ENST00000484545 FANCAO15360 1455 aa27.02■■□□□ 1.92
NELFA-214ENST00000484545 PLCH2O75038 1416 aa27.02■■□□□ 1.92
NELFA-214ENST00000484545 AKNAQ7Z591 1439 aa27.02■■□□□ 1.92
NELFA-214ENST00000484545 CCDC18Q5T9S5 1454 aa27■■□□□ 1.91
NELFA-214ENST00000484545 PCF11O94913 1555 aaKnown RBP26.99■■□□□ 1.91
NELFA-214ENST00000484545 ADGRL1O94910 1474 aa26.99■■□□□ 1.91
NELFA-214ENST00000484545 FYCO1Q9BQS8 1478 aa26.98■■□□□ 1.91
NELFA-214ENST00000484545 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
NELFA-214ENST00000484545 DENND4BO75064 1496 aaPredicted RBP26.96■■□□□ 1.91
NELFA-214ENST00000484545 CFAP74Q9C0B2 1584 aa26.96■■□□□ 1.91
NELFA-214ENST00000484545 EFCAB2Q5VUJ9 269 aa26.93■■□□□ 1.9
NELFA-214ENST00000484545 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
NELFA-214ENST00000484545 KIF14Q15058 1648 aa26.92■■□□□ 1.9
NELFA-214ENST00000484545 CEP162Q5TB80 1403 aa26.89■■□□□ 1.89
NELFA-214ENST00000484545 SCAPERQ9BY12 1400 aa26.86■■□□□ 1.89
NELFA-214ENST00000484545 LOC105371045A0A1W2PR82 267 aa26.84■■□□□ 1.89
NELFA-214ENST00000484545 RICTORQ6R327 1708 aa26.84■■□□□ 1.89
NELFA-214ENST00000484545 MYO5CQ9NQX4 1742 aa26.83■■□□□ 1.89
NELFA-214ENST00000484545 MAGI2Q86UL8 1455 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms