RNA–Protein interactions for RNA: ENST00000484380.2

ABCD4-212, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 1,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-212ENST00000484380 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
ABCD4-212ENST00000484380 CFAP43Q8NDM7 1665 aa21.46■■□□□ 1.03
ABCD4-212ENST00000484380 KANK4Q5T7N3 995 aaPredicted RBP21.43■■□□□ 1.02
ABCD4-212ENST00000484380 GAPVD1Q14C86 1478 aa21.43■■□□□ 1.02
ABCD4-212ENST00000484380 PCF11O94913 1555 aaKnown RBP21.41■■□□□ 1.02
ABCD4-212ENST00000484380 HNRNPUL2Q1KMD3 747 aaKnown RBP21.39■■□□□ 1.02
ABCD4-212ENST00000484380 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.013e-9■■■■□ 22.1
ABCD4-212ENST00000484380 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
ABCD4-212ENST00000484380 FYCO1Q9BQS8 1478 aa21.37■■□□□ 1.01
ABCD4-212ENST00000484380 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
ABCD4-212ENST00000484380 SAMD9Q5K651 1589 aa21.35■■□□□ 1.01
ABCD4-212ENST00000484380 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
ABCD4-212ENST00000484380 LRRC9Q6ZRR7 1453 aa21.35■■□□□ 1.01
ABCD4-212ENST00000484380 TDRD9Q8NDG6 1382 aaKnown RBP21.35■■□□□ 1.01
ABCD4-212ENST00000484380 CCNB3Q8WWL7 1395 aa21.31■■□□□ 1
ABCD4-212ENST00000484380 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
ABCD4-212ENST00000484380 FHOD3Q2V2M9 1422 aa21.3■■□□□ 1
ABCD4-212ENST00000484380 WDR62O43379 1518 aa21.28■■□□□ 1
ABCD4-212ENST00000484380 FMN1Q68DA7 1419 aa21.27■■□□□ 1
ABCD4-212ENST00000484380 PLPPR3Q6T4P5 718 aa21.27■□□□□ 0.99
ABCD4-212ENST00000484380 ADAMTS12P58397 1594 aa21.26■□□□□ 0.99
ABCD4-212ENST00000484380 CLSPNQ9HAW4 1339 aa21.25■□□□□ 0.99
ABCD4-212ENST00000484380 SNAPC4Q5SXM2 1469 aa21.25■□□□□ 0.99
ABCD4-212ENST00000484380 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
ABCD4-212ENST00000484380 IFT140Q96RY7 1462 aa21.21■□□□□ 0.99
ABCD4-212ENST00000484380 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
ABCD4-212ENST00000484380 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
ABCD4-212ENST00000484380 PHLDB1Q86UU1 1377 aa21.16■□□□□ 0.98
ABCD4-212ENST00000484380 P3H3Q8IVL6 736 aa21.15■□□□□ 0.98
ABCD4-212ENST00000484380 LRRIQ1Q96JM4 1722 aa21.14■□□□□ 0.97
ABCD4-212ENST00000484380 IQGAP2Q13576 1575 aa21.13■□□□□ 0.97
ABCD4-212ENST00000484380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.11■□□□□ 0.97
ABCD4-212ENST00000484380 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
ABCD4-212ENST00000484380 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
ABCD4-212ENST00000484380 UGGT2Q9NYU1 1516 aa21.05■□□□□ 0.96
ABCD4-212ENST00000484380 EHBP1L1Q8N3D4 1523 aa21.05■□□□□ 0.96
ABCD4-212ENST00000484380 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
ABCD4-212ENST00000484380 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
ABCD4-212ENST00000484380 HECW1Q76N89 1606 aa21.03■□□□□ 0.96
ABCD4-212ENST00000484380 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
ABCD4-212ENST00000484380 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
ABCD4-212ENST00000484380 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
ABCD4-212ENST00000484380 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
ABCD4-212ENST00000484380 FGD6Q6ZV73 1430 aa20.99■□□□□ 0.95
ABCD4-212ENST00000484380 ATP1B4Q9UN42 357 aaPredicted RBP20.99■□□□□ 0.95
ABCD4-212ENST00000484380 MTUS2Q5JR59 1369 aa20.98■□□□□ 0.95
ABCD4-212ENST00000484380 ARHGEF11O15085 1522 aa20.98■□□□□ 0.95
ABCD4-212ENST00000484380 KIAA0586Q9BVV6 1533 aa20.96■□□□□ 0.95
ABCD4-212ENST00000484380 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
ABCD4-212ENST00000484380 GRIN2AQ12879 1464 aa20.95■□□□□ 0.94
ABCD4-212ENST00000484380 NCOA2Q15596 1464 aa20.94■□□□□ 0.94
ABCD4-212ENST00000484380 MAPKBP1O60336 1514 aa20.94■□□□□ 0.94
ABCD4-212ENST00000484380 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
ABCD4-212ENST00000484380 ITGAEP38570 1179 aa20.92■□□□□ 0.94
ABCD4-212ENST00000484380 MYOM3Q5VTT5 1437 aa20.92■□□□□ 0.94
ABCD4-212ENST00000484380 MAGI3Q5TCQ9 1506 aa20.91■□□□□ 0.94
ABCD4-212ENST00000484380 FAM50AQ14320 339 aaKnown RBP20.9■□□□□ 0.94
ABCD4-212ENST00000484380 EPRSP07814 1512 aaKnown RBP20.89■□□□□ 0.94
ABCD4-212ENST00000484380 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
ABCD4-212ENST00000484380 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
ABCD4-212ENST00000484380 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
ABCD4-212ENST00000484380 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
ABCD4-212ENST00000484380 TCOF1Q13428 1488 aaKnown RBP20.84■□□□□ 0.93
ABCD4-212ENST00000484380 CEP170Q5SW79 1584 aa20.82■□□□□ 0.92
ABCD4-212ENST00000484380 HFM1A2PYH4 1435 aa20.81■□□□□ 0.92
ABCD4-212ENST00000484380 RAPGEF6Q8TEU7 1601 aa20.8■□□□□ 0.92
ABCD4-212ENST00000484380 CDK13Q14004 1512 aaKnown RBP20.79■□□□□ 0.92
ABCD4-212ENST00000484380 NUP160Q12769 1436 aa20.77■□□□□ 0.92
ABCD4-212ENST00000484380 PTPRKQ15262 1439 aa20.77■□□□□ 0.91
ABCD4-212ENST00000484380 MIA2Q96PC5 1412 aa20.76■□□□□ 0.91
ABCD4-212ENST00000484380 GCC2Q8IWJ2 1684 aa20.74■□□□□ 0.91
ABCD4-212ENST00000484380 NUP153P49790 1475 aaKnown RBP20.74■□□□□ 0.91
ABCD4-212ENST00000484380 AKNAQ7Z591 1439 aa20.73■□□□□ 0.91
ABCD4-212ENST00000484380 NAIPQ13075 1403 aa20.71■□□□□ 0.91
ABCD4-212ENST00000484380 UACAQ9BZF9 1416 aa20.7■□□□□ 0.9
ABCD4-212ENST00000484380 TIMELESSQ9UNS1 1208 aa20.69■□□□□ 0.9
ABCD4-212ENST00000484380 CHMP7Q8WUX9 453 aaPredicted RBP20.67■□□□□ 0.9
ABCD4-212ENST00000484380 ADCY10Q96PN6 1610 aa20.64■□□□□ 0.9
ABCD4-212ENST00000484380 CARMIL2Q6F5E8 1435 aa20.64■□□□□ 0.89
ABCD4-212ENST00000484380 FBLN2P98095 1184 aa20.62■□□□□ 0.89
ABCD4-212ENST00000484380 DNMT1P26358 1616 aaKnown RBP20.6■□□□□ 0.89
ABCD4-212ENST00000484380 ITSN2Q9NZM3 1697 aa20.6■□□□□ 0.89
ABCD4-212ENST00000484380 ACIN1Q9UKV3 1341 aaKnown RBP20.59■□□□□ 0.89
ABCD4-212ENST00000484380 CENPBP07199 599 aaPredicted RBP20.59■□□□□ 0.89
ABCD4-212ENST00000484380 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.89
ABCD4-212ENST00000484380 ABCA8O94911 1581 aa20.58■□□□□ 0.88
ABCD4-212ENST00000484380 MIER1Q8N108 512 aa20.57■□□□□ 0.88
ABCD4-212ENST00000484380 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
ABCD4-212ENST00000484380 PLB1Q6P1J6 1458 aa20.56■□□□□ 0.88
ABCD4-212ENST00000484380 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
ABCD4-212ENST00000484380 JPH4Q96JJ6 628 aa20.54■□□□□ 0.88
ABCD4-212ENST00000484380 SIN3AQ96ST3 1273 aa20.54■□□□□ 0.88
ABCD4-212ENST00000484380 DAPK1P53355 1430 aa20.53■□□□□ 0.88
ABCD4-212ENST00000484380 SCAF1Q9H7N4 1312 aaKnown RBP20.52■□□□□ 0.88
ABCD4-212ENST00000484380 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
ABCD4-212ENST00000484380 KDM6BO15054 1643 aa20.5■□□□□ 0.87
ABCD4-212ENST00000484380 KIF14Q15058 1648 aa20.49■□□□□ 0.87
ABCD4-212ENST00000484380 CHD1O14646 1710 aa20.48■□□□□ 0.87
ABCD4-212ENST00000484380 PRG4Q92954 1404 aaPredicted RBP20.48■□□□□ 0.87
ABCD4-212ENST00000484380 ABCC5O15440 1437 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms