RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 CUL7Q14999 1698 aa20.57■□□□□ 0.88
SNRNP200-206ENST00000484372 RUSC2Q8N2Y8 1516 aa20.54■□□□□ 0.88
SNRNP200-206ENST00000484372 KIAA0586Q9BVV6 1533 aa20.52■□□□□ 0.87
SNRNP200-206ENST00000484372 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
SNRNP200-206ENST00000484372 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
SNRNP200-206ENST00000484372 CARMIL2Q6F5E8 1435 aa20.37■□□□□ 0.85
SNRNP200-206ENST00000484372 PTPRGP23470 1445 aa20.34■□□□□ 0.85
SNRNP200-206ENST00000484372 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
SNRNP200-206ENST00000484372 IQGAP2Q13576 1575 aa20.32■□□□□ 0.84
SNRNP200-206ENST00000484372 TTBK1Q5TCY1 1321 aaPredicted RBP20.31■□□□□ 0.84
SNRNP200-206ENST00000484372 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
SNRNP200-206ENST00000484372 FAM69CQ0P6D2 419 aa20.29■□□□□ 0.84
SNRNP200-206ENST00000484372 MAPKBP1O60336 1514 aa20.28■□□□□ 0.84
SNRNP200-206ENST00000484372 ADCY10Q96PN6 1610 aa20.28■□□□□ 0.84
SNRNP200-206ENST00000484372 ABCC10Q5T3U5 1492 aa20.26■□□□□ 0.83
SNRNP200-206ENST00000484372 KIF13AQ9H1H9 1805 aa20.24■□□□□ 0.83
SNRNP200-206ENST00000484372 UGGT2Q9NYU1 1516 aa20.18■□□□□ 0.82
SNRNP200-206ENST00000484372 AEBP2Q6ZN18 517 aaPredicted RBP20.18■□□□□ 0.82
SNRNP200-206ENST00000484372 ABCC2Q92887 1545 aa20.17■□□□□ 0.82
SNRNP200-206ENST00000484372 DISP1Q96F81 1524 aa20.17■□□□□ 0.82
SNRNP200-206ENST00000484372 UACAQ9BZF9 1416 aa20.17■□□□□ 0.82
SNRNP200-206ENST00000484372 DIP2BQ9P265 1576 aa20.17■□□□□ 0.82
SNRNP200-206ENST00000484372 UHRF1BP1LA0JNW5 1464 aa20.15■□□□□ 0.82
SNRNP200-206ENST00000484372 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
SNRNP200-206ENST00000484372 GOLGA3Q08378 1498 aa20.11■□□□□ 0.81
SNRNP200-206ENST00000484372 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
SNRNP200-206ENST00000484372 PRXQ9BXM0 1461 aa20.11■□□□□ 0.81
SNRNP200-206ENST00000484372 KIAA0556O60303 1618 aa20.11■□□□□ 0.81
SNRNP200-206ENST00000484372 ASXL2Q76L83 1435 aa20.1■□□□□ 0.81
SNRNP200-206ENST00000484372 CTTNBP2Q8WZ74 1663 aa20.1■□□□□ 0.81
SNRNP200-206ENST00000484372 CSRNP3Q8WYN3 585 aa20.07■□□□□ 0.8
SNRNP200-206ENST00000484372 KDM5BQ9UGL1 1544 aa20.05■□□□□ 0.8
SNRNP200-206ENST00000484372 TSPOAP1O95153 1857 aa20.03■□□□□ 0.8
SNRNP200-206ENST00000484372 EEA1Q15075 1411 aa20.02■□□□□ 0.79
SNRNP200-206ENST00000484372 KDM6BO15054 1643 aa20.01■□□□□ 0.79
SNRNP200-206ENST00000484372 GLI2P10070 1586 aa20■□□□□ 0.79
SNRNP200-206ENST00000484372 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
SNRNP200-206ENST00000484372 EPRSP07814 1512 aaKnown RBP19.96■□□□□ 0.79
SNRNP200-206ENST00000484372 WDR7Q9Y4E6 1490 aa19.92■□□□□ 0.78
SNRNP200-206ENST00000484372 P3H3Q8IVL6 736 aa19.92■□□□□ 0.78
SNRNP200-206ENST00000484372 ABCA8O94911 1581 aa19.91■□□□□ 0.78
SNRNP200-206ENST00000484372 TEX14Q8IWB6 1497 aa19.91■□□□□ 0.78
SNRNP200-206ENST00000484372 KCNH8Q96L42 1107 aa19.87■□□□□ 0.77
SNRNP200-206ENST00000484372 MAP3K4Q9Y6R4 1608 aa19.86■□□□□ 0.77
SNRNP200-206ENST00000484372 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
SNRNP200-206ENST00000484372 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.77
SNRNP200-206ENST00000484372 CD109Q6YHK3 1445 aa19.82■□□□□ 0.76
SNRNP200-206ENST00000484372 ARID3CA6NKF2 412 aa19.81■□□□□ 0.76
SNRNP200-206ENST00000484372 SAMD9Q5K651 1589 aa19.81■□□□□ 0.76
SNRNP200-206ENST00000484372 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
SNRNP200-206ENST00000484372 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
SNRNP200-206ENST00000484372 ATP10BO94823 1461 aa19.77■□□□□ 0.76
SNRNP200-206ENST00000484372 CFAP43Q8NDM7 1665 aa19.77■□□□□ 0.76
SNRNP200-206ENST00000484372 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
SNRNP200-206ENST00000484372 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
SNRNP200-206ENST00000484372 KIF21BO75037 1637 aa19.76■□□□□ 0.75
SNRNP200-206ENST00000484372 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
SNRNP200-206ENST00000484372 COL17A1Q9UMD9 1497 aaPredicted RBP19.73■□□□□ 0.75
SNRNP200-206ENST00000484372 KDM4FA0A1W2PPD8 638 aa19.73■□□□□ 0.75
SNRNP200-206ENST00000484372 UBTFP17480 764 aaKnown RBP19.73■□□□□ 0.75
SNRNP200-206ENST00000484372 FHOD3Q2V2M9 1422 aa19.72■□□□□ 0.75
SNRNP200-206ENST00000484372 EFCAB5A4FU69 1503 aa19.71■□□□□ 0.75
SNRNP200-206ENST00000484372 PLEKHD1A6NEE1 506 aa19.68■□□□□ 0.74
SNRNP200-206ENST00000484372 EHMT2Q96KQ7 1210 aa19.67■□□□□ 0.74
SNRNP200-206ENST00000484372 PHLDB1Q86UU1 1377 aa19.66■□□□□ 0.74
SNRNP200-206ENST00000484372 NUP153P49790 1475 aaKnown RBP19.66■□□□□ 0.74
SNRNP200-206ENST00000484372 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
SNRNP200-206ENST00000484372 ADGRL1O94910 1474 aa19.61■□□□□ 0.73
SNRNP200-206ENST00000484372 ARAP3Q8WWN8 1544 aa19.61■□□□□ 0.73
SNRNP200-206ENST00000484372 FMN1Q68DA7 1419 aa19.58■□□□□ 0.72
SNRNP200-206ENST00000484372 NEO1Q92859 1461 aa19.57■□□□□ 0.72
SNRNP200-206ENST00000484372 ATP1B4Q9UN42 357 aaPredicted RBP19.57■□□□□ 0.72
SNRNP200-206ENST00000484372 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
SNRNP200-206ENST00000484372 RAPGEF3O95398 923 aa19.51■□□□□ 0.71
SNRNP200-206ENST00000484372 ARHGAP35Q9NRY4 1499 aa19.5■□□□□ 0.71
SNRNP200-206ENST00000484372 HECW1Q76N89 1606 aa19.47■□□□□ 0.71
SNRNP200-206ENST00000484372 CDK13Q14004 1512 aaKnown RBP19.47■□□□□ 0.71
SNRNP200-206ENST00000484372 FANCAO15360 1455 aa19.46■□□□□ 0.71
SNRNP200-206ENST00000484372 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.46■□□□□ 0.71
SNRNP200-206ENST00000484372 CFAP74Q9C0B2 1584 aa19.45■□□□□ 0.7
SNRNP200-206ENST00000484372 AKNAQ7Z591 1439 aa19.45■□□□□ 0.7
SNRNP200-206ENST00000484372 DENND4BO75064 1496 aaPredicted RBP19.45■□□□□ 0.7
SNRNP200-206ENST00000484372 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
SNRNP200-206ENST00000484372 CLIP1P30622 1438 aa19.4■□□□□ 0.7
SNRNP200-206ENST00000484372 TTC37Q6PGP7 1564 aa19.4■□□□□ 0.7
SNRNP200-206ENST00000484372 PLCH2O75038 1416 aa19.39■□□□□ 0.69
SNRNP200-206ENST00000484372 EFCAB2Q5VUJ9 269 aa19.38■□□□□ 0.69
SNRNP200-206ENST00000484372 FRMPD1Q5SYB0 1578 aa19.36■□□□□ 0.69
SNRNP200-206ENST00000484372 TROQ12816 1431 aaPredicted RBP19.36■□□□□ 0.69
SNRNP200-206ENST00000484372 CASKIN1Q8WXD9 1431 aa19.34■□□□□ 0.69
SNRNP200-206ENST00000484372 KIF14Q15058 1648 aa19.33■□□□□ 0.69
SNRNP200-206ENST00000484372 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.68
SNRNP200-206ENST00000484372 SCAPERQ9BY12 1400 aa19.33■□□□□ 0.68
SNRNP200-206ENST00000484372 RICTORQ6R327 1708 aa19.32■□□□□ 0.68
SNRNP200-206ENST00000484372 MAGI2Q86UL8 1455 aa19.32■□□□□ 0.68
SNRNP200-206ENST00000484372 ARHGEF40Q8TER5 1519 aa19.31■□□□□ 0.68
SNRNP200-206ENST00000484372 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
SNRNP200-206ENST00000484372 MYO5CQ9NQX4 1742 aa19.3■□□□□ 0.68
SNRNP200-206ENST00000484372 ZMYM4Q5VZL5 1548 aa19.29■□□□□ 0.68
SNRNP200-206ENST00000484372 HECW2Q9P2P5 1572 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms