RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 IL27Q8NEV9 243 aa9.8□□□□□ -0.84
ABCA13-206ENST00000484268 VPS8Q8N3P4 1428 aa9.8□□□□□ -0.84
ABCA13-206ENST00000484268 CCER2I3L3R5 266 aa9.79□□□□□ -0.84
ABCA13-206ENST00000484268 KANK4Q5T7N3 995 aaPredicted RBP9.79□□□□□ -0.84
ABCA13-206ENST00000484268 SIN3AQ96ST3 1273 aa9.78□□□□□ -0.84
ABCA13-206ENST00000484268 NOP58Q9Y2X3 529 aaKnown RBP9.77□□□□□ -0.84
ABCA13-206ENST00000484268 BAZ1AQ9NRL2 1556 aaPredicted RBP9.77□□□□□ -0.85
ABCA13-206ENST00000484268 HNRNPUQ00839 825 aaKnown RBP eCLIP9.76□□□□□ -0.85
ABCA13-206ENST00000484268 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
ABCA13-206ENST00000484268 PPP1R15AO75807 674 aaPredicted RBP9.76□□□□□ -0.85
ABCA13-206ENST00000484268 ANP32CO43423 234 aa9.75□□□□□ -0.85
ABCA13-206ENST00000484268 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
ABCA13-206ENST00000484268 FOXD1Q16676 465 aa9.73□□□□□ -0.85
ABCA13-206ENST00000484268 CUX2O14529 1486 aa9.72□□□□□ -0.85
ABCA13-206ENST00000484268 CEP164Q9UPV0 1460 aa9.72□□□□□ -0.85
ABCA13-206ENST00000484268 PPP4R2Q9NY27 417 aa9.71□□□□□ -0.86
ABCA13-206ENST00000484268 WDR97A6NE52 1622 aa9.7□□□□□ -0.86
ABCA13-206ENST00000484268 KIF21BO75037 1637 aa9.7□□□□□ -0.86
ABCA13-206ENST00000484268 BAZ1BQ9UIG0 1483 aaKnown RBP9.7□□□□□ -0.86
ABCA13-206ENST00000484268 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
ABCA13-206ENST00000484268 RAPGEF2Q9Y4G8 1499 aa9.68□□□□□ -0.86
ABCA13-206ENST00000484268 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
ABCA13-206ENST00000484268 RRBP1Q9P2E9 1410 aaKnown RBP9.66□□□□□ -0.86
ABCA13-206ENST00000484268 RAB3GAP2Q9H2M9 1393 aa9.66□□□□□ -0.86
ABCA13-206ENST00000484268 MAPKBP1O60336 1514 aa9.66□□□□□ -0.86
ABCA13-206ENST00000484268 WASHC2AQ641Q2 1341 aa9.63□□□□□ -0.87
ABCA13-206ENST00000484268 TOP2AP11388 1531 aaKnown RBP9.63□□□□□ -0.87
ABCA13-206ENST00000484268 IPO9Q96P70 1041 aaKnown RBP9.63□□□□□ -0.87
ABCA13-206ENST00000484268 CNGB1Q14028 1251 aaPredicted RBP9.63□□□□□ -0.87
ABCA13-206ENST00000484268 CCDC184Q52MB2 194 aa9.63□□□□□ -0.87
ABCA13-206ENST00000484268 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
ABCA13-206ENST00000484268 LAS1LQ9Y4W2 734 aaKnown RBP9.62□□□□□ -0.87
ABCA13-206ENST00000484268 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
ABCA13-206ENST00000484268 C11orf95C9JLR9 678 aaPredicted RBP9.61□□□□□ -0.87
ABCA13-206ENST00000484268 ANP32AP39687 249 aaKnown RBP9.61□□□□□ -0.87
ABCA13-206ENST00000484268 FAM9BQ8IZU0 186 aa9.61□□□□□ -0.87
ABCA13-206ENST00000484268 ZBTB47Q9UFB7 747 aaPredicted RBP9.61□□□□□ -0.87
ABCA13-206ENST00000484268 CCNB3Q8WWL7 1395 aa9.6□□□□□ -0.87
ABCA13-206ENST00000484268 FAM50AQ14320 339 aaKnown RBP9.59□□□□□ -0.87
ABCA13-206ENST00000484268 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
ABCA13-206ENST00000484268 WASHC2CQ9Y4E1 1318 aa9.58□□□□□ -0.88
ABCA13-206ENST00000484268 BRPF3Q9ULD4 1205 aa9.57□□□□□ -0.88
ABCA13-206ENST00000484268 SYNJ1O43426 1573 aa9.56□□□□□ -0.88
ABCA13-206ENST00000484268 USP35Q9P2H5 1018 aa9.56□□□□□ -0.88
ABCA13-206ENST00000484268 ARAP1Q96P48 1450 aa9.55□□□□□ -0.88
ABCA13-206ENST00000484268 NCBP3Q53F19 620 aaKnown RBP9.55□□□□□ -0.88
ABCA13-206ENST00000484268 PKNOX2Q96KN3 472 aa9.55□□□□□ -0.88
ABCA13-206ENST00000484268 NEFMP07197 916 aa9.54□□□□□ -0.88
ABCA13-206ENST00000484268 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
ABCA13-206ENST00000484268 SETD5Q9C0A6 1442 aa9.52□□□□□ -0.88
ABCA13-206ENST00000484268 ATP1B4Q9UN42 357 aaPredicted RBP9.52□□□□□ -0.89
ABCA13-206ENST00000484268 AKNAQ7Z591 1439 aa9.5□□□□□ -0.89
ABCA13-206ENST00000484268 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
ABCA13-206ENST00000484268 KLHL34Q8N239 644 aa9.49□□□□□ -0.89
ABCA13-206ENST00000484268 TONSLQ96HA7 1378 aa9.49□□□□□ -0.89
ABCA13-206ENST00000484268 NCAPD3P42695 1498 aa9.49□□□□□ -0.89
ABCA13-206ENST00000484268 ZBED9Q6R2W3 1325 aa9.48□□□□□ -0.89
ABCA13-206ENST00000484268 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
ABCA13-206ENST00000484268 PEG3Q9GZU2 1588 aa9.47□□□□□ -0.89
ABCA13-206ENST00000484268 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
ABCA13-206ENST00000484268 PPP4R3CPQ6ZMV5 832 aa9.46□□□□□ -0.89
ABCA13-206ENST00000484268 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
ABCA13-206ENST00000484268 HSPA5P11021 654 aaKnown RBP9.45□□□□□ -0.9
ABCA13-206ENST00000484268 GSE1Q14687 1217 aa9.45□□□□□ -0.9
ABCA13-206ENST00000484268 SMARCA4P51532 1647 aa9.45□□□□□ -0.9
ABCA13-206ENST00000484268 SLC4A3P48751 1232 aa9.44□□□□□ -0.9
ABCA13-206ENST00000484268 P3H3Q8IVL6 736 aa9.44□□□□□ -0.9
ABCA13-206ENST00000484268 PHLDB1Q86UU1 1377 aa9.44□□□□□ -0.9
ABCA13-206ENST00000484268 ERICH3Q5RHP9 1530 aa9.43□□□□□ -0.9
ABCA13-206ENST00000484268 CC2D2AQ9P2K1 1620 aa9.43□□□□□ -0.9
ABCA13-206ENST00000484268 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
ABCA13-206ENST00000484268 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
ABCA13-206ENST00000484268 FHAD1B1AJZ9 1412 aa9.41□□□□□ -0.9
ABCA13-206ENST00000484268 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
ABCA13-206ENST00000484268 SMG6Q86US8 1419 aaKnown RBP9.41□□□□□ -0.9
ABCA13-206ENST00000484268 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
ABCA13-206ENST00000484268 PRXQ9BXM0 1461 aa9.4□□□□□ -0.9
ABCA13-206ENST00000484268 PRKRIP1Q9H875 184 aaPredicted RBP9.4□□□□□ -0.9
ABCA13-206ENST00000484268 GLIPR1L2Q4G1C9 344 aa9.4□□□□□ -0.9
ABCA13-206ENST00000484268 PABPN1Q86U42 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
ABCA13-206ENST00000484268 FRAT1Q92837 279 aaPredicted RBP9.39□□□□□ -0.91
ABCA13-206ENST00000484268 ARHGAP35Q9NRY4 1499 aa9.38□□□□□ -0.91
ABCA13-206ENST00000484268 NCOA2Q15596 1464 aa9.38□□□□□ -0.91
ABCA13-206ENST00000484268 CNTLNQ9NXG0 1405 aa9.38□□□□□ -0.91
ABCA13-206ENST00000484268 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
ABCA13-206ENST00000484268 PDE4AP27815 886 aa9.38□□□□□ -0.91
ABCA13-206ENST00000484268 HMGXB3Q12766 1538 aa9.37□□□□□ -0.91
ABCA13-206ENST00000484268 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
ABCA13-206ENST00000484268 NUDCQ9Y266 331 aa9.36□□□□□ -0.91
ABCA13-206ENST00000484268 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
ABCA13-206ENST00000484268 NFKBIBQ15653 356 aa9.36□□□□□ -0.91
ABCA13-206ENST00000484268 EXOC6Q8TAG9 804 aa9.36□□□□□ -0.91
ABCA13-206ENST00000484268 BACH2Q9BYV9 841 aa9.36□□□□□ -0.91
ABCA13-206ENST00000484268 TIAM1Q13009 1591 aa9.35□□□□□ -0.91
ABCA13-206ENST00000484268 EIF4G2P78344 907 aaKnown RBP eCLIP9.34□□□□□ -0.91
ABCA13-206ENST00000484268 KDM5BQ9UGL1 1544 aa9.34□□□□□ -0.91
ABCA13-206ENST00000484268 MS4A1P11836 297 aa9.34□□□□□ -0.91
ABCA13-206ENST00000484268 VSIG10Q8N0Z9 540 aa9.34□□□□□ -0.91
ABCA13-206ENST00000484268 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
ABCA13-206ENST00000484268 ARXQ96QS3 562 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms