RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
NUP50-215ENST00000484186 CUL7Q14999 1698 aa16.27■□□□□ 0.2
NUP50-215ENST00000484186 KIAA0586Q9BVV6 1533 aa16.27■□□□□ 0.2
NUP50-215ENST00000484186 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
NUP50-215ENST00000484186 NPM1P06748 294 aaKnown RBP eCLIP16.18■□□□□ 0.18
NUP50-215ENST00000484186 PTPRGP23470 1445 aa16.11■□□□□ 0.17
NUP50-215ENST00000484186 CARMIL2Q6F5E8 1435 aa16.11■□□□□ 0.17
NUP50-215ENST00000484186 RAPGEF2Q9Y4G8 1499 aa16.11■□□□□ 0.17
NUP50-215ENST00000484186 TNIKQ9UKE5 1360 aa16.1■□□□□ 0.17
NUP50-215ENST00000484186 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
NUP50-215ENST00000484186 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
NUP50-215ENST00000484186 TTBK1Q5TCY1 1321 aaPredicted RBP16.09■□□□□ 0.17
NUP50-215ENST00000484186 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
NUP50-215ENST00000484186 MAPKBP1O60336 1514 aa16.06■□□□□ 0.16
NUP50-215ENST00000484186 ABCC10Q5T3U5 1492 aa16.06■□□□□ 0.16
NUP50-215ENST00000484186 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
NUP50-215ENST00000484186 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
NUP50-215ENST00000484186 UGGT2Q9NYU1 1516 aa16.01■□□□□ 0.15
NUP50-215ENST00000484186 DIP2BQ9P265 1576 aa15.99■□□□□ 0.15
NUP50-215ENST00000484186 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
NUP50-215ENST00000484186 UACAQ9BZF9 1416 aa15.98■□□□□ 0.15
NUP50-215ENST00000484186 UHRF1BP1LA0JNW5 1464 aa15.97■□□□□ 0.15
NUP50-215ENST00000484186 PRXQ9BXM0 1461 aa15.97■□□□□ 0.15
NUP50-215ENST00000484186 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
NUP50-215ENST00000484186 AEBP2Q6ZN18 517 aaPredicted RBP15.93■□□□□ 0.14
NUP50-215ENST00000484186 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
NUP50-215ENST00000484186 PLB1Q6P1J6 1458 aa15.92■□□□□ 0.14
NUP50-215ENST00000484186 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
NUP50-215ENST00000484186 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
NUP50-215ENST00000484186 GOLGA3Q08378 1498 aa15.9■□□□□ 0.14
NUP50-215ENST00000484186 KDM5BQ9UGL1 1544 aa15.89■□□□□ 0.13
NUP50-215ENST00000484186 GLI2P10070 1586 aa15.86■□□□□ 0.13
NUP50-215ENST00000484186 TSPOAP1O95153 1857 aa15.86■□□□□ 0.13
NUP50-215ENST00000484186 EEA1Q15075 1411 aa15.84■□□□□ 0.13
NUP50-215ENST00000484186 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.12
NUP50-215ENST00000484186 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.12
NUP50-215ENST00000484186 KDM6BO15054 1643 aa15.83■□□□□ 0.12
NUP50-215ENST00000484186 ZCCHC11Q5TAX3 1644 aaKnown RBP15.83■□□□□ 0.12
NUP50-215ENST00000484186 P3H3Q8IVL6 736 aa15.81■□□□□ 0.12
NUP50-215ENST00000484186 ABCA8O94911 1581 aa15.8■□□□□ 0.12
NUP50-215ENST00000484186 WDR7Q9Y4E6 1490 aa15.78■□□□□ 0.12
NUP50-215ENST00000484186 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
NUP50-215ENST00000484186 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
NUP50-215ENST00000484186 MAP3K4Q9Y6R4 1608 aa15.75■□□□□ 0.11
NUP50-215ENST00000484186 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
NUP50-215ENST00000484186 CHIC1Q5VXU3 224 aa15.72■□□□□ 0.11
NUP50-215ENST00000484186 SAMD9Q5K651 1589 aa15.71■□□□□ 0.11
NUP50-215ENST00000484186 ARID3CA6NKF2 412 aa15.71■□□□□ 0.11
NUP50-215ENST00000484186 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
NUP50-215ENST00000484186 COL17A1Q9UMD9 1497 aaPredicted RBP15.71■□□□□ 0.1
NUP50-215ENST00000484186 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
NUP50-215ENST00000484186 ATP10BO94823 1461 aa15.7■□□□□ 0.1
NUP50-215ENST00000484186 KDM4FA0A1W2PPD8 638 aa15.68■□□□□ 0.1
NUP50-215ENST00000484186 MAGI3Q5TCQ9 1506 aa15.67■□□□□ 0.1
NUP50-215ENST00000484186 KIF21BO75037 1637 aa15.65■□□□□ 0.1
NUP50-215ENST00000484186 CFAP43Q8NDM7 1665 aa15.65■□□□□ 0.1
NUP50-215ENST00000484186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
NUP50-215ENST00000484186 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
NUP50-215ENST00000484186 RAPGEF6Q8TEU7 1601 aa15.65■□□□□ 0.1
NUP50-215ENST00000484186 FHOD3Q2V2M9 1422 aa15.64■□□□□ 0.09
NUP50-215ENST00000484186 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
NUP50-215ENST00000484186 EHMT2Q96KQ7 1210 aa15.61■□□□□ 0.09
NUP50-215ENST00000484186 NUP153P49790 1475 aaKnown RBP15.6■□□□□ 0.09
NUP50-215ENST00000484186 EFCAB5A4FU69 1503 aa15.59■□□□□ 0.09
NUP50-215ENST00000484186 PLEKHD1A6NEE1 506 aa15.57■□□□□ 0.08
NUP50-215ENST00000484186 ABCA9Q8IUA7 1624 aa15.56■□□□□ 0.08
NUP50-215ENST00000484186 PHLDB1Q86UU1 1377 aa15.55■□□□□ 0.08
NUP50-215ENST00000484186 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
NUP50-215ENST00000484186 ADGRL1O94910 1474 aa15.53■□□□□ 0.08
NUP50-215ENST00000484186 NEO1Q92859 1461 aa15.5■□□□□ 0.07
NUP50-215ENST00000484186 ARHGAP35Q9NRY4 1499 aa15.49■□□□□ 0.07
NUP50-215ENST00000484186 ATP1B4Q9UN42 357 aaPredicted RBP15.49■□□□□ 0.07
NUP50-215ENST00000484186 RAPGEF3O95398 923 aa15.48■□□□□ 0.07
NUP50-215ENST00000484186 FMN1Q68DA7 1419 aa15.48■□□□□ 0.07
NUP50-215ENST00000484186 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
NUP50-215ENST00000484186 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-215ENST00000484186 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
NUP50-215ENST00000484186 AKNAQ7Z591 1439 aa15.42■□□□□ 0.06
NUP50-215ENST00000484186 HECW1Q76N89 1606 aa15.41■□□□□ 0.06
NUP50-215ENST00000484186 FANCAO15360 1455 aa15.4■□□□□ 0.06
NUP50-215ENST00000484186 DENND4BO75064 1496 aaPredicted RBP15.4■□□□□ 0.06
NUP50-215ENST00000484186 TTC37Q6PGP7 1564 aa15.38■□□□□ 0.05
NUP50-215ENST00000484186 FRMPD1Q5SYB0 1578 aa15.37■□□□□ 0.05
NUP50-215ENST00000484186 CFAP74Q9C0B2 1584 aa15.37■□□□□ 0.05
NUP50-215ENST00000484186 PLCH2O75038 1416 aa15.37■□□□□ 0.05
NUP50-215ENST00000484186 ARID4BQ4LE39 1312 aaPredicted RBP15.35■□□□□ 0.05
NUP50-215ENST00000484186 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
NUP50-215ENST00000484186 TROQ12816 1431 aaPredicted RBP15.34■□□□□ 0.05
NUP50-215ENST00000484186 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.04
NUP50-215ENST00000484186 RICTORQ6R327 1708 aa15.32■□□□□ 0.04
NUP50-215ENST00000484186 CLIP1P30622 1438 aa15.32■□□□□ 0.04
NUP50-215ENST00000484186 SCAPERQ9BY12 1400 aa15.32■□□□□ 0.04
NUP50-215ENST00000484186 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
NUP50-215ENST00000484186 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
NUP50-215ENST00000484186 KIF14Q15058 1648 aa15.29■□□□□ 0.04
NUP50-215ENST00000484186 ZMYM4Q5VZL5 1548 aa15.28■□□□□ 0.04
NUP50-215ENST00000484186 ARHGEF40Q8TER5 1519 aa15.28■□□□□ 0.04
NUP50-215ENST00000484186 CCDC18Q5T9S5 1454 aa15.28■□□□□ 0.04
NUP50-215ENST00000484186 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
NUP50-215ENST00000484186 MYO5CQ9NQX4 1742 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms