RNA–Protein interactions for RNA: ENST00000483687.5

PCCB-216, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-216ENST00000483687 CEP170Q5SW79 1584 aa30.56■■■□□ 2.48
PCCB-216ENST00000483687 NUP160Q12769 1436 aa30.54■■■□□ 2.48
PCCB-216ENST00000483687 CEP162Q5TB80 1403 aa30.51■■■□□ 2.47
PCCB-216ENST00000483687 RANGAP1P46060 587 aaPredicted RBP30.49■■■□□ 2.47
PCCB-216ENST00000483687 KIAA0586Q9BVV6 1533 aa30.48■■■□□ 2.47
PCCB-216ENST00000483687 IQGAP2Q13576 1575 aa30.47■■■□□ 2.47
PCCB-216ENST00000483687 CLIP1P30622 1438 aa30.42■■■□□ 2.46
PCCB-216ENST00000483687 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
PCCB-216ENST00000483687 UGGT2Q9NYU1 1516 aa30.3■■■□□ 2.44
PCCB-216ENST00000483687 ARHGAP35Q9NRY4 1499 aa30.3■■■□□ 2.44
PCCB-216ENST00000483687 OSCARQ8IYS5 282 aa30.3■■■□□ 2.44
PCCB-216ENST00000483687 EFCAB5A4FU69 1503 aa30.29■■■□□ 2.44
PCCB-216ENST00000483687 JPH4Q96JJ6 628 aa30.27■■■□□ 2.44
PCCB-216ENST00000483687 SAMD9Q5K651 1589 aa30.26■■■□□ 2.43
PCCB-216ENST00000483687 SHROOM2Q13796 1616 aa30.21■■■□□ 2.43
PCCB-216ENST00000483687 P3H3Q8IVL6 736 aa30.21■■■□□ 2.43
PCCB-216ENST00000483687 ARAP1Q96P48 1450 aa30.18■■■□□ 2.42
PCCB-216ENST00000483687 DISP1Q96F81 1524 aa30.18■■■□□ 2.42
PCCB-216ENST00000483687 KIAA0556O60303 1618 aa30.17■■■□□ 2.42
PCCB-216ENST00000483687 FHOD3Q2V2M9 1422 aa30.16■■■□□ 2.42
PCCB-216ENST00000483687 CARMIL2Q6F5E8 1435 aa30.14■■■□□ 2.42
PCCB-216ENST00000483687 PRG4Q92954 1404 aaPredicted RBP30.14■■■□□ 2.42
PCCB-216ENST00000483687 VPS8Q8N3P4 1428 aa30.06■■■□□ 2.4
PCCB-216ENST00000483687 ERCC6L2Q5T890 1561 aa30.02■■■□□ 2.4
PCCB-216ENST00000483687 FMN1Q68DA7 1419 aa30.01■■■□□ 2.39
PCCB-216ENST00000483687 TTBK1Q5TCY1 1321 aaPredicted RBP29.98■■■□□ 2.39
PCCB-216ENST00000483687 PCF11O94913 1555 aaKnown RBP29.91■■■□□ 2.38
PCCB-216ENST00000483687 PTPRGP23470 1445 aa29.89■■■□□ 2.37
PCCB-216ENST00000483687 CASKIN1Q8WXD9 1431 aa29.86■■■□□ 2.37
PCCB-216ENST00000483687 FYCO1Q9BQS8 1478 aa29.85■■■□□ 2.37
PCCB-216ENST00000483687 ATP1B4Q9UN42 357 aaPredicted RBP29.82■■■□□ 2.36
PCCB-216ENST00000483687 ARHGEF11O15085 1522 aa29.82■■■□□ 2.36
PCCB-216ENST00000483687 RAPGEF6Q8TEU7 1601 aa29.81■■■□□ 2.36
PCCB-216ENST00000483687 PLB1Q6P1J6 1458 aa29.8■■■□□ 2.36
PCCB-216ENST00000483687 HECW1Q76N89 1606 aa29.78■■■□□ 2.36
PCCB-216ENST00000483687 APLP2Q06481 763 aa29.76■■■□□ 2.36
PCCB-216ENST00000483687 ABCA8O94911 1581 aa29.76■■■□□ 2.35
PCCB-216ENST00000483687 RIMBP3CA6NJZ7 1639 aa29.73■■■□□ 2.35
PCCB-216ENST00000483687 RIMBP3BA6NNM3 1639 aa29.73■■■□□ 2.35
PCCB-216ENST00000483687 RIMBP3Q9UFD9 1639 aa29.73■■■□□ 2.35
PCCB-216ENST00000483687 LRRIQ1Q96JM4 1722 aa29.71■■■□□ 2.35
PCCB-216ENST00000483687 UACAQ9BZF9 1416 aa29.71■■■□□ 2.35
PCCB-216ENST00000483687 NUP153P49790 1475 aaKnown RBP29.69■■■□□ 2.34
PCCB-216ENST00000483687 CCDC18Q5T9S5 1454 aa29.66■■■□□ 2.34
PCCB-216ENST00000483687 EPRSP07814 1512 aaKnown RBP29.66■■■□□ 2.34
PCCB-216ENST00000483687 CFAP43Q8NDM7 1665 aa29.66■■■□□ 2.34
PCCB-216ENST00000483687 TIAM1Q13009 1591 aa29.65■■■□□ 2.34
PCCB-216ENST00000483687 ABCC2Q92887 1545 aa29.65■■■□□ 2.34
PCCB-216ENST00000483687 ARID3CA6NKF2 412 aa29.64■■■□□ 2.34
PCCB-216ENST00000483687 MAP3K1Q13233 1512 aa29.64■■■□□ 2.34
PCCB-216ENST00000483687 CDK13Q14004 1512 aaKnown RBP29.61■■■□□ 2.33
PCCB-216ENST00000483687 PPARGC1BQ86YN6 1023 aaKnown RBP29.6■■■□□ 2.33
PCCB-216ENST00000483687 UHRF1BP1LA0JNW5 1464 aa29.6■■■□□ 2.33
PCCB-216ENST00000483687 ADCY10Q96PN6 1610 aa29.57■■■□□ 2.32
PCCB-216ENST00000483687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.56■■■□□ 2.32
PCCB-216ENST00000483687 HNRNPUL2Q1KMD3 747 aaKnown RBP29.56■■■□□ 2.32
PCCB-216ENST00000483687 KANK4Q5T7N3 995 aaPredicted RBP29.54■■■□□ 2.32
PCCB-216ENST00000483687 ATP10BO94823 1461 aa29.53■■■□□ 2.32
PCCB-216ENST00000483687 CYB5RLQ6IPT4 315 aa29.52■■■□□ 2.32
PCCB-216ENST00000483687 LRRC9Q6ZRR7 1453 aa29.51■■■□□ 2.31
PCCB-216ENST00000483687 KDM5BQ9UGL1 1544 aa29.48■■■□□ 2.31
PCCB-216ENST00000483687 ZCCHC11Q5TAX3 1644 aaKnown RBP29.47■■■□□ 2.31
PCCB-216ENST00000483687 MTUS2Q5JR59 1369 aa29.46■■■□□ 2.31
PCCB-216ENST00000483687 CDK11AQ9UQ88 783 aaPredicted RBP29.45■■■□□ 2.31
PCCB-216ENST00000483687 MAGI3Q5TCQ9 1506 aa29.44■■■□□ 2.3
PCCB-216ENST00000483687 EHBP1L1Q8N3D4 1523 aa29.43■■■□□ 2.3
PCCB-216ENST00000483687 PLEKHD1A6NEE1 506 aa29.37■■■□□ 2.29
PCCB-216ENST00000483687 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
PCCB-216ENST00000483687 NPM1P06748 294 aaKnown RBP eCLIP29.37■■■□□ 2.29
PCCB-216ENST00000483687 TROQ12816 1431 aaPredicted RBP29.35■■■□□ 2.29
PCCB-216ENST00000483687 SUPT6HQ7KZ85 1726 aaKnown RBP29.34■■■□□ 2.29
PCCB-216ENST00000483687 NCOA2Q15596 1464 aa29.27■■■□□ 2.28
PCCB-216ENST00000483687 KIF14Q15058 1648 aa29.25■■■□□ 2.27
PCCB-216ENST00000483687 ASXL2Q76L83 1435 aa29.23■■■□□ 2.27
PCCB-216ENST00000483687 WDR7Q9Y4E6 1490 aa29.23■■■□□ 2.27
PCCB-216ENST00000483687 PHLDB1Q86UU1 1377 aa29.2■■■□□ 2.26
PCCB-216ENST00000483687 KCNH8Q96L42 1107 aa29.18■■■□□ 2.26
PCCB-216ENST00000483687 MAPKBP1O60336 1514 aa29.17■■■□□ 2.26
PCCB-216ENST00000483687 ABCC10Q5T3U5 1492 aa29.12■■■□□ 2.25
PCCB-216ENST00000483687 CCNB3Q8WWL7 1395 aa29.11■■■□□ 2.25
PCCB-216ENST00000483687 TRIM26Q12899 539 aaPredicted RBP29.11■■■□□ 2.25
PCCB-216ENST00000483687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.11■■■□□ 2.253e-8■■■□□ 16.7
PCCB-216ENST00000483687 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
PCCB-216ENST00000483687 TTC37Q6PGP7 1564 aa29.09■■■□□ 2.25
PCCB-216ENST00000483687 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
PCCB-216ENST00000483687 CDC42BPAQ5VT25 1732 aa29.05■■■□□ 2.24
PCCB-216ENST00000483687 RRBP1Q9P2E9 1410 aaKnown RBP29.05■■■□□ 2.24
PCCB-216ENST00000483687 FGD6Q6ZV73 1430 aa29.04■■■□□ 2.24
PCCB-216ENST00000483687 GPATCH8Q9UKJ3 1502 aaKnown RBP29.04■■■□□ 2.24
PCCB-216ENST00000483687 MYO5CQ9NQX4 1742 aa29.01■■■□□ 2.24
PCCB-216ENST00000483687 ABCA9Q8IUA7 1624 aa29.01■■■□□ 2.24
PCCB-216ENST00000483687 MIA2Q96PC5 1412 aa28.99■■■□□ 2.23
PCCB-216ENST00000483687 PREX2Q70Z35 1606 aa28.99■■■□□ 2.23
PCCB-216ENST00000483687 CFDP1Q9UEE9 299 aaPredicted RBP28.97■■■□□ 2.23
PCCB-216ENST00000483687 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
PCCB-216ENST00000483687 CDC42BPBQ9Y5S2 1711 aa28.96■■■□□ 2.23
PCCB-216ENST00000483687 FAM50AQ14320 339 aaKnown RBP28.94■■■□□ 2.22
PCCB-216ENST00000483687 DIP2BQ9P265 1576 aa28.93■■■□□ 2.22
PCCB-216ENST00000483687 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
PCCB-216ENST00000483687 ARHGAP5Q13017 1502 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms