RNA–Protein interactions for RNA: ENST00000483474.1

RTCA-204, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 3

Gene RTCA, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-204ENST00000483474 PRG4Q92954 1404 aaPredicted RBP29.52■■■□□ 2.32
RTCA-204ENST00000483474 ERCC6L2Q5T890 1561 aa29.51■■■□□ 2.31
RTCA-204ENST00000483474 TRHP20396 242 aaPredicted RBP29.49■■■□□ 2.31
RTCA-204ENST00000483474 KIAA0586Q9BVV6 1533 aa29.49■■■□□ 2.31
RTCA-204ENST00000483474 RAPGEF2Q9Y4G8 1499 aa29.38■■■□□ 2.29
RTCA-204ENST00000483474 IQGAP2Q13576 1575 aa29.3■■■□□ 2.28
RTCA-204ENST00000483474 CARMIL2Q6F5E8 1435 aa29.28■■■□□ 2.28
RTCA-204ENST00000483474 NPM1P06748 294 aaKnown RBP eCLIP29.23■■■□□ 2.27
RTCA-204ENST00000483474 CTTNBP2Q8WZ74 1663 aa29.16■■■□□ 2.26
RTCA-204ENST00000483474 PTPRGP23470 1445 aa29.15■■■□□ 2.26
RTCA-204ENST00000483474 TTBK1Q5TCY1 1321 aaPredicted RBP29.14■■■□□ 2.25
RTCA-204ENST00000483474 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
RTCA-204ENST00000483474 PRXQ9BXM0 1461 aa29.12■■■□□ 2.25
RTCA-204ENST00000483474 CSRNP3Q8WYN3 585 aa29.12■■■□□ 2.25
RTCA-204ENST00000483474 EEA1Q15075 1411 aa29.11■■■□□ 2.25
RTCA-204ENST00000483474 UGGT2Q9NYU1 1516 aa29.08■■■□□ 2.25
RTCA-204ENST00000483474 ADCY10Q96PN6 1610 aa29.06■■■□□ 2.24
RTCA-204ENST00000483474 DISP1Q96F81 1524 aa29.03■■■□□ 2.24
RTCA-204ENST00000483474 GOLGA3Q08378 1498 aa29■■■□□ 2.23
RTCA-204ENST00000483474 KIAA0556O60303 1618 aa28.98■■■□□ 2.23
RTCA-204ENST00000483474 CHIC1Q5VXU3 224 aa28.97■■■□□ 2.23
RTCA-204ENST00000483474 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
RTCA-204ENST00000483474 MAPKBP1O60336 1514 aa28.96■■■□□ 2.23
RTCA-204ENST00000483474 KIF13AQ9H1H9 1805 aa28.94■■■□□ 2.22
RTCA-204ENST00000483474 UACAQ9BZF9 1416 aa28.92■■■□□ 2.22
RTCA-204ENST00000483474 ABCC2Q92887 1545 aa28.89■■■□□ 2.22
RTCA-204ENST00000483474 FAM69CQ0P6D2 419 aa28.89■■■□□ 2.22
RTCA-204ENST00000483474 UHRF1BP1LA0JNW5 1464 aa28.89■■■□□ 2.22
RTCA-204ENST00000483474 ABCC10Q5T3U5 1492 aa28.87■■■□□ 2.21
RTCA-204ENST00000483474 DIP2BQ9P265 1576 aa28.79■■■□□ 2.2
RTCA-204ENST00000483474 KIF21BO75037 1637 aa28.79■■■□□ 2.2
RTCA-204ENST00000483474 PLB1Q6P1J6 1458 aa28.78■■■□□ 2.2
RTCA-204ENST00000483474 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
RTCA-204ENST00000483474 ASXL2Q76L83 1435 aa28.74■■■□□ 2.19
RTCA-204ENST00000483474 P3H3Q8IVL6 736 aa28.73■■■□□ 2.19
RTCA-204ENST00000483474 ZCCHC11Q5TAX3 1644 aaKnown RBP28.71■■■□□ 2.19
RTCA-204ENST00000483474 TSPOAP1O95153 1857 aa28.7■■■□□ 2.19
RTCA-204ENST00000483474 RANGAP1P46060 587 aaPredicted RBP28.7■■■□□ 2.18
RTCA-204ENST00000483474 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
RTCA-204ENST00000483474 ABCA8O94911 1581 aa28.67■■■□□ 2.18
RTCA-204ENST00000483474 SAMD9Q5K651 1589 aa28.67■■■□□ 2.18
RTCA-204ENST00000483474 EHMT2Q96KQ7 1210 aa28.62■■■□□ 2.17
RTCA-204ENST00000483474 GLI2P10070 1586 aa28.6■■■□□ 2.17
RTCA-204ENST00000483474 EFCAB5A4FU69 1503 aa28.55■■■□□ 2.16
RTCA-204ENST00000483474 EPRSP07814 1512 aaKnown RBP28.55■■■□□ 2.16
RTCA-204ENST00000483474 WDR7Q9Y4E6 1490 aa28.55■■■□□ 2.16
RTCA-204ENST00000483474 RAPGEF6Q8TEU7 1601 aa28.52■■■□□ 2.16
RTCA-204ENST00000483474 FHOD3Q2V2M9 1422 aa28.5■■■□□ 2.15
RTCA-204ENST00000483474 KCNH8Q96L42 1107 aa28.49■■■□□ 2.15
RTCA-204ENST00000483474 KDM6BO15054 1643 aa28.49■■■□□ 2.15
RTCA-204ENST00000483474 ARID3CA6NKF2 412 aa28.48■■■□□ 2.15
RTCA-204ENST00000483474 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.48■■■□□ 2.15
RTCA-204ENST00000483474 HNRNPUL2Q1KMD3 747 aaKnown RBP28.48■■■□□ 2.15
RTCA-204ENST00000483474 MAP3K4Q9Y6R4 1608 aa28.46■■■□□ 2.15
RTCA-204ENST00000483474 ATP10BO94823 1461 aa28.44■■■□□ 2.14
RTCA-204ENST00000483474 TEX14Q8IWB6 1497 aa28.44■■■□□ 2.14
RTCA-204ENST00000483474 PPRC1Q5VV67 1664 aaKnown RBP28.41■■■□□ 2.14
RTCA-204ENST00000483474 CFAP43Q8NDM7 1665 aa28.4■■■□□ 2.14
RTCA-204ENST00000483474 CD109Q6YHK3 1445 aa28.35■■■□□ 2.13
RTCA-204ENST00000483474 NUP153P49790 1475 aaKnown RBP28.34■■■□□ 2.13
RTCA-204ENST00000483474 FMN1Q68DA7 1419 aa28.33■■■□□ 2.13
RTCA-204ENST00000483474 PLEKHD1A6NEE1 506 aa28.31■■■□□ 2.12
RTCA-204ENST00000483474 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
RTCA-204ENST00000483474 ATP1B4Q9UN42 357 aaPredicted RBP28.29■■■□□ 2.12
RTCA-204ENST00000483474 ARHGAP35Q9NRY4 1499 aa28.28■■■□□ 2.12
RTCA-204ENST00000483474 MAGI3Q5TCQ9 1506 aa28.27■■■□□ 2.12
RTCA-204ENST00000483474 ABCA9Q8IUA7 1624 aa28.22■■■□□ 2.11
RTCA-204ENST00000483474 HECW1Q76N89 1606 aa28.21■■■□□ 2.11
RTCA-204ENST00000483474 CDK11AQ9UQ88 783 aaPredicted RBP28.17■■■□□ 2.1
RTCA-204ENST00000483474 PHLDB1Q86UU1 1377 aa28.13■■■□□ 2.09
RTCA-204ENST00000483474 CDK13Q14004 1512 aaKnown RBP28.13■■■□□ 2.09
RTCA-204ENST00000483474 COL17A1Q9UMD9 1497 aaPredicted RBP28.12■■■□□ 2.09
RTCA-204ENST00000483474 CLIP1P30622 1438 aa28.09■■■□□ 2.09
RTCA-204ENST00000483474 ARAP3Q8WWN8 1544 aa28.05■■■□□ 2.08
RTCA-204ENST00000483474 NEO1Q92859 1461 aa28.05■■■□□ 2.08
RTCA-204ENST00000483474 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.02■■■□□ 2.081e-9■■■□□ 16.2
RTCA-204ENST00000483474 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.08
RTCA-204ENST00000483474 CFAP74Q9C0B2 1584 aa28■■■□□ 2.07
RTCA-204ENST00000483474 CCDC18Q5T9S5 1454 aa27.99■■■□□ 2.07
RTCA-204ENST00000483474 PCF11O94913 1555 aaKnown RBP27.97■■■□□ 2.07
RTCA-204ENST00000483474 LRRIQ1Q96JM4 1722 aa27.96■■■□□ 2.07
RTCA-204ENST00000483474 TTC37Q6PGP7 1564 aa27.95■■■□□ 2.07
RTCA-204ENST00000483474 FANCAO15360 1455 aa27.95■■■□□ 2.06
RTCA-204ENST00000483474 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.06
RTCA-204ENST00000483474 KIF14Q15058 1648 aa27.94■■■□□ 2.06
RTCA-204ENST00000483474 TROQ12816 1431 aaPredicted RBP27.93■■■□□ 2.06
RTCA-204ENST00000483474 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
RTCA-204ENST00000483474 AKNAQ7Z591 1439 aa27.91■■■□□ 2.06
RTCA-204ENST00000483474 RAPGEF3O95398 923 aa27.9■■■□□ 2.06
RTCA-204ENST00000483474 KDM4FA0A1W2PPD8 638 aa27.89■■■□□ 2.06
RTCA-204ENST00000483474 PLCH2O75038 1416 aa27.88■■■□□ 2.05
RTCA-204ENST00000483474 CEP162Q5TB80 1403 aa27.86■■■□□ 2.05
RTCA-204ENST00000483474 EFCAB2Q5VUJ9 269 aa27.86■■■□□ 2.05
RTCA-204ENST00000483474 DENND4BO75064 1496 aaPredicted RBP27.86■■■□□ 2.05
RTCA-204ENST00000483474 ADGRL1O94910 1474 aa27.83■■■□□ 2.05
RTCA-204ENST00000483474 LOC105371045A0A1W2PR82 267 aa27.79■■■□□ 2.04
RTCA-204ENST00000483474 RICTORQ6R327 1708 aa27.78■■■□□ 2.04
RTCA-204ENST00000483474 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
RTCA-204ENST00000483474 FRMPD1Q5SYB0 1578 aa27.76■■■□□ 2.03
RTCA-204ENST00000483474 SCAPERQ9BY12 1400 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms