RNA–Protein interactions for RNA: ENST00000483414.1

LIMK1-205, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 3,374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-205ENST00000483414 KIAA0586Q9BVV6 1533 aa15.8■□□□□ 0.12
LIMK1-205ENST00000483414 UGGT2Q9NYU1 1516 aa15.8■□□□□ 0.12
LIMK1-205ENST00000483414 TNIKQ9UKE5 1360 aa15.78■□□□□ 0.12
LIMK1-205ENST00000483414 DISP1Q96F81 1524 aa15.74■□□□□ 0.11
LIMK1-205ENST00000483414 KIAA0556O60303 1618 aa15.72■□□□□ 0.11
LIMK1-205ENST00000483414 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
LIMK1-205ENST00000483414 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
LIMK1-205ENST00000483414 ERCC6L2Q5T890 1561 aa15.71■□□□□ 0.11
LIMK1-205ENST00000483414 EFCAB5A4FU69 1503 aa15.7■□□□□ 0.1
LIMK1-205ENST00000483414 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
LIMK1-205ENST00000483414 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
LIMK1-205ENST00000483414 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
LIMK1-205ENST00000483414 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
LIMK1-205ENST00000483414 FBLN2P98095 1184 aa15.61■□□□□ 0.09
LIMK1-205ENST00000483414 RIMBP3CA6NJZ7 1639 aa15.59■□□□□ 0.09
LIMK1-205ENST00000483414 RIMBP3BA6NNM3 1639 aa15.59■□□□□ 0.09
LIMK1-205ENST00000483414 RIMBP3Q9UFD9 1639 aa15.59■□□□□ 0.09
LIMK1-205ENST00000483414 OSCARQ8IYS5 282 aa15.58■□□□□ 0.09
LIMK1-205ENST00000483414 CLIP1P30622 1438 aa15.57■□□□□ 0.08
LIMK1-205ENST00000483414 PRG4Q92954 1404 aaPredicted RBP15.57■□□□□ 0.08
LIMK1-205ENST00000483414 ARHGEF11O15085 1522 aa15.56■□□□□ 0.08
LIMK1-205ENST00000483414 ABCA8O94911 1581 aa15.55■□□□□ 0.08
LIMK1-205ENST00000483414 JPH4Q96JJ6 628 aa15.55■□□□□ 0.08
LIMK1-205ENST00000483414 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
LIMK1-205ENST00000483414 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
LIMK1-205ENST00000483414 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
LIMK1-205ENST00000483414 FHOD3Q2V2M9 1422 aa15.52■□□□□ 0.07
LIMK1-205ENST00000483414 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
LIMK1-205ENST00000483414 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
LIMK1-205ENST00000483414 CFAP43Q8NDM7 1665 aa15.47■□□□□ 0.07
LIMK1-205ENST00000483414 CARMIL2Q6F5E8 1435 aa15.47■□□□□ 0.07
LIMK1-205ENST00000483414 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
LIMK1-205ENST00000483414 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
LIMK1-205ENST00000483414 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
LIMK1-205ENST00000483414 CASKIN1Q8WXD9 1431 aa15.43■□□□□ 0.06
LIMK1-205ENST00000483414 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
LIMK1-205ENST00000483414 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
LIMK1-205ENST00000483414 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
LIMK1-205ENST00000483414 HECW1Q76N89 1606 aa15.42■□□□□ 0.06
LIMK1-205ENST00000483414 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
LIMK1-205ENST00000483414 ZCCHC11Q5TAX3 1644 aaKnown RBP15.39■□□□□ 0.05
LIMK1-205ENST00000483414 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
LIMK1-205ENST00000483414 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
LIMK1-205ENST00000483414 PCGF6Q9BYE7 350 aa15.36■□□□□ 0.05
LIMK1-205ENST00000483414 PTPRGP23470 1445 aa15.36■□□□□ 0.05
LIMK1-205ENST00000483414 MAGI3Q5TCQ9 1506 aa15.36■□□□□ 0.05
LIMK1-205ENST00000483414 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
LIMK1-205ENST00000483414 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
LIMK1-205ENST00000483414 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
LIMK1-205ENST00000483414 EPRSP07814 1512 aaKnown RBP15.34■□□□□ 0.05
LIMK1-205ENST00000483414 P3H3Q8IVL6 736 aa15.33■□□□□ 0.05
LIMK1-205ENST00000483414 CDK13Q14004 1512 aaKnown RBP15.32■□□□□ 0.04
LIMK1-205ENST00000483414 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
LIMK1-205ENST00000483414 ATP10BO94823 1461 aa15.31■□□□□ 0.04
LIMK1-205ENST00000483414 DNAJC5Q9H3Z4 198 aa15.31■□□□□ 0.04
LIMK1-205ENST00000483414 CCDC18Q5T9S5 1454 aa15.31■□□□□ 0.04
LIMK1-205ENST00000483414 MAPKBP1O60336 1514 aa15.28■□□□□ 0.04
LIMK1-205ENST00000483414 KIF14Q15058 1648 aa15.23■□□□□ 0.03
LIMK1-205ENST00000483414 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
LIMK1-205ENST00000483414 EHBP1L1Q8N3D4 1523 aa15.22■□□□□ 0.03
LIMK1-205ENST00000483414 KIF13AQ9H1H9 1805 aa15.2■□□□□ 0.02
LIMK1-205ENST00000483414 HRCP23327 699 aa15.18■□□□□ 0.02
LIMK1-205ENST00000483414 ABCA9Q8IUA7 1624 aa15.17■□□□□ 0.02
LIMK1-205ENST00000483414 CDC42BPAQ5VT25 1732 aa15.17■□□□□ 0.02
LIMK1-205ENST00000483414 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
LIMK1-205ENST00000483414 ABCC10Q5T3U5 1492 aa15.17■□□□□ 0.02
LIMK1-205ENST00000483414 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
LIMK1-205ENST00000483414 DIP2BQ9P265 1576 aa15.16■□□□□ 0.02
LIMK1-205ENST00000483414 MAP3K4Q9Y6R4 1608 aa15.16■□□□□ 0.02
LIMK1-205ENST00000483414 WDR7Q9Y4E6 1490 aa15.16■□□□□ 0.02
LIMK1-205ENST00000483414 GLI2P10070 1586 aa15.15■□□□□ 0.02
LIMK1-205ENST00000483414 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
LIMK1-205ENST00000483414 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.15■□□□□ 0.02
LIMK1-205ENST00000483414 TROQ12816 1431 aaPredicted RBP15.14■□□□□ 0.01
LIMK1-205ENST00000483414 CDC42BPBQ9Y5S2 1711 aa15.14■□□□□ 0.01
LIMK1-205ENST00000483414 ASXL2Q76L83 1435 aa15.14■□□□□ 0.01
LIMK1-205ENST00000483414 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
LIMK1-205ENST00000483414 PREX2Q70Z35 1606 aa15.13■□□□□ 0.01
LIMK1-205ENST00000483414 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
LIMK1-205ENST00000483414 MYO5CQ9NQX4 1742 aa15.1■□□□□ 0.01
LIMK1-205ENST00000483414 TTBK1Q5TCY1 1321 aaPredicted RBP15.09■□□□□ 0.01
LIMK1-205ENST00000483414 NCOA2Q15596 1464 aa15.09■□□□□ 0.01
LIMK1-205ENST00000483414 ITSN2Q9NZM3 1697 aa15.09■□□□□ 0.01
LIMK1-205ENST00000483414 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
LIMK1-205ENST00000483414 PHLDB1Q86UU1 1377 aa15.04■□□□□ -0
LIMK1-205ENST00000483414 GPATCH8Q9UKJ3 1502 aaKnown RBP15.03■□□□□ -0
LIMK1-205ENST00000483414 ARID3CA6NKF2 412 aa15.02□□□□□ -0.01
LIMK1-205ENST00000483414 SAMD9LQ8IVG5 1584 aa15.01□□□□□ -0.01
LIMK1-205ENST00000483414 TCOF1Q13428 1488 aaKnown RBP15.01□□□□□ -0.01
LIMK1-205ENST00000483414 RRBP1Q9P2E9 1410 aaKnown RBP15□□□□□ -0.01
LIMK1-205ENST00000483414 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
LIMK1-205ENST00000483414 CROCC2H7BZ55 1655 aa14.99□□□□□ -0.01
LIMK1-205ENST00000483414 PTPN23Q9H3S7 1636 aa14.98□□□□□ -0.01
LIMK1-205ENST00000483414 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
LIMK1-205ENST00000483414 PLCH2O75038 1416 aa14.96□□□□□ -0.01
LIMK1-205ENST00000483414 CFAP74Q9C0B2 1584 aa14.95□□□□□ -0.02
LIMK1-205ENST00000483414 ATP1B4Q9UN42 357 aaPredicted RBP14.95□□□□□ -0.02
LIMK1-205ENST00000483414 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
LIMK1-205ENST00000483414 ABCC1P33527 1531 aa14.95□□□□□ -0.02
LIMK1-205ENST00000483414 PLEKHD1A6NEE1 506 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms