RNA–Protein interactions for RNA: ENST00000483128.1

SHANK1-207, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 780 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-207ENST00000483128 CUL7Q14999 1698 aa24.16■■□□□ 1.46
SHANK1-207ENST00000483128 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
SHANK1-207ENST00000483128 CARMIL1Q5VZK9 1371 aa24.13■■□□□ 1.45
SHANK1-207ENST00000483128 KIAA0586Q9BVV6 1533 aa24.07■■□□□ 1.44
SHANK1-207ENST00000483128 TTBK1Q5TCY1 1321 aaPredicted RBP23.92■■□□□ 1.42
SHANK1-207ENST00000483128 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
SHANK1-207ENST00000483128 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
SHANK1-207ENST00000483128 IQGAP2Q13576 1575 aa23.87■■□□□ 1.41
SHANK1-207ENST00000483128 PTPRGP23470 1445 aa23.84■■□□□ 1.41
SHANK1-207ENST00000483128 CARMIL2Q6F5E8 1435 aa23.84■■□□□ 1.41
SHANK1-207ENST00000483128 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
SHANK1-207ENST00000483128 TNIKQ9UKE5 1360 aa23.8■■□□□ 1.4
SHANK1-207ENST00000483128 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
SHANK1-207ENST00000483128 DISP1Q96F81 1524 aa23.75■■□□□ 1.39
SHANK1-207ENST00000483128 FAM69CQ0P6D2 419 aa23.75■■□□□ 1.39
SHANK1-207ENST00000483128 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
SHANK1-207ENST00000483128 UGGT2Q9NYU1 1516 aa23.72■■□□□ 1.39
SHANK1-207ENST00000483128 PRXQ9BXM0 1461 aa23.71■■□□□ 1.39
SHANK1-207ENST00000483128 ABCC10Q5T3U5 1492 aa23.7■■□□□ 1.38
SHANK1-207ENST00000483128 CTTNBP2Q8WZ74 1663 aa23.67■■□□□ 1.38
SHANK1-207ENST00000483128 KIAA0556O60303 1618 aa23.66■■□□□ 1.38
SHANK1-207ENST00000483128 CSRNP3Q8WYN3 585 aa23.65■■□□□ 1.38
SHANK1-207ENST00000483128 UACAQ9BZF9 1416 aa23.65■■□□□ 1.38
SHANK1-207ENST00000483128 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
SHANK1-207ENST00000483128 ABCC2Q92887 1545 aa23.64■■□□□ 1.38
SHANK1-207ENST00000483128 UHRF1BP1LA0JNW5 1464 aa23.61■■□□□ 1.37
SHANK1-207ENST00000483128 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
SHANK1-207ENST00000483128 ASXL2Q76L83 1435 aa23.57■■□□□ 1.36
SHANK1-207ENST00000483128 GOLGA3Q08378 1498 aa23.56■■□□□ 1.36
SHANK1-207ENST00000483128 TSPOAP1O95153 1857 aa23.53■■□□□ 1.36
SHANK1-207ENST00000483128 EEA1Q15075 1411 aa23.52■■□□□ 1.36
SHANK1-207ENST00000483128 PLB1Q6P1J6 1458 aa23.52■■□□□ 1.36
SHANK1-207ENST00000483128 KDM5BQ9UGL1 1544 aa23.51■■□□□ 1.35
SHANK1-207ENST00000483128 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
SHANK1-207ENST00000483128 ZCCHC11Q5TAX3 1644 aaKnown RBP23.48■■□□□ 1.35
SHANK1-207ENST00000483128 CHIC1Q5VXU3 224 aa23.46■■□□□ 1.35
SHANK1-207ENST00000483128 RANGAP1P46060 587 aaPredicted RBP23.45■■□□□ 1.34
SHANK1-207ENST00000483128 ABCA8O94911 1581 aa23.42■■□□□ 1.34
SHANK1-207ENST00000483128 GLI2P10070 1586 aa23.41■■□□□ 1.34
SHANK1-207ENST00000483128 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
SHANK1-207ENST00000483128 EPRSP07814 1512 aaKnown RBP23.41■■□□□ 1.34
SHANK1-207ENST00000483128 KDM6BO15054 1643 aa23.4■■□□□ 1.34
SHANK1-207ENST00000483128 ARID3CA6NKF2 412 aa23.39■■□□□ 1.33
SHANK1-207ENST00000483128 EHMT2Q96KQ7 1210 aa23.38■■□□□ 1.33
SHANK1-207ENST00000483128 WDR7Q9Y4E6 1490 aa23.36■■□□□ 1.33
SHANK1-207ENST00000483128 KCNH8Q96L42 1107 aa23.35■■□□□ 1.33
SHANK1-207ENST00000483128 SAMD9Q5K651 1589 aa23.35■■□□□ 1.33
SHANK1-207ENST00000483128 PPRC1Q5VV67 1664 aaKnown RBP23.34■■□□□ 1.33
SHANK1-207ENST00000483128 KIF21BO75037 1637 aa23.32■■□□□ 1.32
SHANK1-207ENST00000483128 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
SHANK1-207ENST00000483128 FHOD3Q2V2M9 1422 aa23.27■■□□□ 1.32
SHANK1-207ENST00000483128 ATP10BO94823 1461 aa23.26■■□□□ 1.31
SHANK1-207ENST00000483128 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
SHANK1-207ENST00000483128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
SHANK1-207ENST00000483128 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
SHANK1-207ENST00000483128 TEX14Q8IWB6 1497 aa23.24■■□□□ 1.31
SHANK1-207ENST00000483128 RAPGEF6Q8TEU7 1601 aa23.23■■□□□ 1.31
SHANK1-207ENST00000483128 CD109Q6YHK3 1445 aa23.22■■□□□ 1.31
SHANK1-207ENST00000483128 COL17A1Q9UMD9 1497 aaPredicted RBP23.21■■□□□ 1.31
SHANK1-207ENST00000483128 CFAP43Q8NDM7 1665 aa23.17■■□□□ 1.3
SHANK1-207ENST00000483128 EFCAB5A4FU69 1503 aa23.16■■□□□ 1.3
SHANK1-207ENST00000483128 NUP153P49790 1475 aaKnown RBP23.16■■□□□ 1.3
SHANK1-207ENST00000483128 MAGI3Q5TCQ9 1506 aa23.14■■□□□ 1.3
SHANK1-207ENST00000483128 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
SHANK1-207ENST00000483128 PLEKHD1A6NEE1 506 aa23.06■■□□□ 1.28
SHANK1-207ENST00000483128 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
SHANK1-207ENST00000483128 ABCA9Q8IUA7 1624 aa23.04■■□□□ 1.28
SHANK1-207ENST00000483128 ARHGAP35Q9NRY4 1499 aa23.04■■□□□ 1.28
SHANK1-207ENST00000483128 FMN1Q68DA7 1419 aa22.99■■□□□ 1.27
SHANK1-207ENST00000483128 CDK13Q14004 1512 aaKnown RBP22.98■■□□□ 1.27
SHANK1-207ENST00000483128 ADGRL1O94910 1474 aa22.95■■□□□ 1.26
SHANK1-207ENST00000483128 ARAP3Q8WWN8 1544 aa22.95■■□□□ 1.26
SHANK1-207ENST00000483128 PHLDB1Q86UU1 1377 aa22.92■■□□□ 1.26
SHANK1-207ENST00000483128 RAPGEF3O95398 923 aa22.92■■□□□ 1.26
SHANK1-207ENST00000483128 HECW1Q76N89 1606 aa22.91■■□□□ 1.26
SHANK1-207ENST00000483128 NEO1Q92859 1461 aa22.91■■□□□ 1.26
SHANK1-207ENST00000483128 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.9■■□□□ 1.26
SHANK1-207ENST00000483128 TTC37Q6PGP7 1564 aa22.86■■□□□ 1.25
SHANK1-207ENST00000483128 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
SHANK1-207ENST00000483128 FANCAO15360 1455 aa22.83■■□□□ 1.25
SHANK1-207ENST00000483128 AKNAQ7Z591 1439 aa22.82■■□□□ 1.24
SHANK1-207ENST00000483128 LRRIQ1Q96JM4 1722 aa22.79■■□□□ 1.24
SHANK1-207ENST00000483128 CLIP1P30622 1438 aa22.78■■□□□ 1.24
SHANK1-207ENST00000483128 FRMPD1Q5SYB0 1578 aa22.78■■□□□ 1.24
SHANK1-207ENST00000483128 DENND4BO75064 1496 aaPredicted RBP22.78■■□□□ 1.24
SHANK1-207ENST00000483128 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
SHANK1-207ENST00000483128 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
SHANK1-207ENST00000483128 PLCH2O75038 1416 aa22.76■■□□□ 1.23
SHANK1-207ENST00000483128 CASKIN1Q8WXD9 1431 aa22.76■■□□□ 1.23
SHANK1-207ENST00000483128 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
SHANK1-207ENST00000483128 KIF14Q15058 1648 aa22.75■■□□□ 1.23
SHANK1-207ENST00000483128 RICTORQ6R327 1708 aa22.72■■□□□ 1.23
SHANK1-207ENST00000483128 ARID4BQ4LE39 1312 aaPredicted RBP22.71■■□□□ 1.23
SHANK1-207ENST00000483128 EFCAB2Q5VUJ9 269 aa22.7■■□□□ 1.22
SHANK1-207ENST00000483128 SCAPERQ9BY12 1400 aa22.7■■□□□ 1.22
SHANK1-207ENST00000483128 MYO5CQ9NQX4 1742 aa22.7■■□□□ 1.22
SHANK1-207ENST00000483128 CCDC18Q5T9S5 1454 aa22.69■■□□□ 1.22
SHANK1-207ENST00000483128 FYCO1Q9BQS8 1478 aa22.66■■□□□ 1.22
SHANK1-207ENST00000483128 ARHGAP5Q13017 1502 aa22.64■■□□□ 1.21
SHANK1-207ENST00000483128 ARHGEF40Q8TER5 1519 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms