RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 CTTNBP2Q8WZ74 1663 aa24.1■■□□□ 1.45
PHGDH-205ENST00000482968 CEP162Q5TB80 1403 aa24.08■■□□□ 1.45
PHGDH-205ENST00000482968 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
PHGDH-205ENST00000482968 NUP160Q12769 1436 aa24.05■■□□□ 1.44
PHGDH-205ENST00000482968 KIAA0586Q9BVV6 1533 aa24.02■■□□□ 1.44
PHGDH-205ENST00000482968 CLIP1P30622 1438 aa24.01■■□□□ 1.43
PHGDH-205ENST00000482968 IQGAP2Q13576 1575 aa23.99■■□□□ 1.43
PHGDH-205ENST00000482968 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
PHGDH-205ENST00000482968 OSCARQ8IYS5 282 aa23.93■■□□□ 1.42
PHGDH-205ENST00000482968 JPH4Q96JJ6 628 aa23.93■■□□□ 1.42
PHGDH-205ENST00000482968 ARHGAP35Q9NRY4 1499 aa23.9■■□□□ 1.42
PHGDH-205ENST00000482968 UGGT2Q9NYU1 1516 aa23.87■■□□□ 1.41
PHGDH-205ENST00000482968 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
PHGDH-205ENST00000482968 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
PHGDH-205ENST00000482968 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
PHGDH-205ENST00000482968 SAMD9Q5K651 1589 aa23.81■■□□□ 1.4
PHGDH-205ENST00000482968 FHOD3Q2V2M9 1422 aa23.8■■□□□ 1.4
PHGDH-205ENST00000482968 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
PHGDH-205ENST00000482968 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
PHGDH-205ENST00000482968 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
PHGDH-205ENST00000482968 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
PHGDH-205ENST00000482968 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
PHGDH-205ENST00000482968 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
PHGDH-205ENST00000482968 VPS8Q8N3P4 1428 aa23.72■■□□□ 1.39
PHGDH-205ENST00000482968 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
PHGDH-205ENST00000482968 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
PHGDH-205ENST00000482968 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
PHGDH-205ENST00000482968 PTPRGP23470 1445 aa23.59■■□□□ 1.37
PHGDH-205ENST00000482968 PCF11O94913 1555 aaKnown RBP23.55■■□□□ 1.36
PHGDH-205ENST00000482968 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
PHGDH-205ENST00000482968 APLP2Q06481 763 aa23.55■■□□□ 1.36
PHGDH-205ENST00000482968 PPARGC1BQ86YN6 1023 aaKnown RBP23.52■■□□□ 1.36
PHGDH-205ENST00000482968 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
PHGDH-205ENST00000482968 FYCO1Q9BQS8 1478 aa23.51■■□□□ 1.35
PHGDH-205ENST00000482968 ARID3CA6NKF2 412 aa23.47■■□□□ 1.35
PHGDH-205ENST00000482968 RAPGEF6Q8TEU7 1601 aa23.47■■□□□ 1.35
PHGDH-205ENST00000482968 ARHGEF11O15085 1522 aa23.46■■□□□ 1.35
PHGDH-205ENST00000482968 ABCA8O94911 1581 aa23.44■■□□□ 1.34
PHGDH-205ENST00000482968 HECW1Q76N89 1606 aa23.43■■□□□ 1.34
PHGDH-205ENST00000482968 UACAQ9BZF9 1416 aa23.43■■□□□ 1.34
PHGDH-205ENST00000482968 LRRIQ1Q96JM4 1722 aa23.41■■□□□ 1.34
PHGDH-205ENST00000482968 NUP153P49790 1475 aaKnown RBP23.41■■□□□ 1.34
PHGDH-205ENST00000482968 RIMBP3CA6NJZ7 1639 aa23.39■■□□□ 1.33
PHGDH-205ENST00000482968 RIMBP3BA6NNM3 1639 aa23.39■■□□□ 1.33
PHGDH-205ENST00000482968 RIMBP3Q9UFD9 1639 aa23.39■■□□□ 1.33
PHGDH-205ENST00000482968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.39■■□□□ 1.33
PHGDH-205ENST00000482968 HNRNPUL2Q1KMD3 747 aaKnown RBP23.39■■□□□ 1.33
PHGDH-205ENST00000482968 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.33
PHGDH-205ENST00000482968 EPRSP07814 1512 aaKnown RBP23.39■■□□□ 1.33
PHGDH-205ENST00000482968 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
PHGDH-205ENST00000482968 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
PHGDH-205ENST00000482968 CDK13Q14004 1512 aaKnown RBP23.35■■□□□ 1.33
PHGDH-205ENST00000482968 CCDC18Q5T9S5 1454 aa23.35■■□□□ 1.33
PHGDH-205ENST00000482968 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
PHGDH-205ENST00000482968 ABCC2Q92887 1545 aa23.34■■□□□ 1.33
PHGDH-205ENST00000482968 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.32
PHGDH-205ENST00000482968 ATP10BO94823 1461 aa23.31■■□□□ 1.32
PHGDH-205ENST00000482968 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
PHGDH-205ENST00000482968 LRRC9Q6ZRR7 1453 aa23.28■■□□□ 1.32
PHGDH-205ENST00000482968 ADCY10Q96PN6 1610 aa23.28■■□□□ 1.32
PHGDH-205ENST00000482968 CDK11AQ9UQ88 783 aaPredicted RBP23.27■■□□□ 1.32
PHGDH-205ENST00000482968 MTUS2Q5JR59 1369 aa23.27■■□□□ 1.32
PHGDH-205ENST00000482968 MAGI3Q5TCQ9 1506 aa23.22■■□□□ 1.31
PHGDH-205ENST00000482968 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
PHGDH-205ENST00000482968 KDM5BQ9UGL1 1544 aa23.22■■□□□ 1.31
PHGDH-205ENST00000482968 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
PHGDH-205ENST00000482968 ZCCHC11Q5TAX3 1644 aaKnown RBP23.19■■□□□ 1.3
PHGDH-205ENST00000482968 DNAJC5Q9H3Z4 198 aa23.17■■□□□ 1.3
PHGDH-205ENST00000482968 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
PHGDH-205ENST00000482968 TROQ12816 1431 aaPredicted RBP23.14■■□□□ 1.29
PHGDH-205ENST00000482968 SUPT6HQ7KZ85 1726 aaKnown RBP23.1■■□□□ 1.29
PHGDH-205ENST00000482968 KCNH8Q96L42 1107 aa23.09■■□□□ 1.29
PHGDH-205ENST00000482968 NCOA2Q15596 1464 aa23.09■■□□□ 1.29
PHGDH-205ENST00000482968 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.29
PHGDH-205ENST00000482968 PHLDB1Q86UU1 1377 aa23.06■■□□□ 1.28
PHGDH-205ENST00000482968 ASXL2Q76L83 1435 aa23.05■■□□□ 1.28
PHGDH-205ENST00000482968 KIF14Q15058 1648 aa23.05■■□□□ 1.28
PHGDH-205ENST00000482968 WDR7Q9Y4E6 1490 aa23.02■■□□□ 1.28
PHGDH-205ENST00000482968 CCNB3Q8WWL7 1395 aa22.99■■□□□ 1.27
PHGDH-205ENST00000482968 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
PHGDH-205ENST00000482968 MYOM3Q5VTT5 1437 aa22.96■■□□□ 1.27
PHGDH-205ENST00000482968 ABCC10Q5T3U5 1492 aa22.96■■□□□ 1.27
PHGDH-205ENST00000482968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.94■■□□□ 1.26
PHGDH-205ENST00000482968 MAPKBP1O60336 1514 aa22.94■■□□□ 1.26
PHGDH-205ENST00000482968 RRBP1Q9P2E9 1410 aaKnown RBP22.93■■□□□ 1.26
PHGDH-205ENST00000482968 GPATCH8Q9UKJ3 1502 aaKnown RBP22.92■■□□□ 1.26
PHGDH-205ENST00000482968 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
PHGDH-205ENST00000482968 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
PHGDH-205ENST00000482968 CFDP1Q9UEE9 299 aaPredicted RBP22.9■■□□□ 1.26
PHGDH-205ENST00000482968 TTC37Q6PGP7 1564 aa22.9■■□□□ 1.26
PHGDH-205ENST00000482968 CDC42BPAQ5VT25 1732 aa22.88■■□□□ 1.25
PHGDH-205ENST00000482968 ZNF777Q9ULD5 760 aaPredicted RBP22.86■■□□□ 1.25
PHGDH-205ENST00000482968 MIA2Q96PC5 1412 aa22.86■■□□□ 1.25
PHGDH-205ENST00000482968 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
PHGDH-205ENST00000482968 ZNF644Q9H582 1327 aaPredicted RBP22.84■■□□□ 1.25
PHGDH-205ENST00000482968 ABCA9Q8IUA7 1624 aa22.83■■□□□ 1.25
PHGDH-205ENST00000482968 PTPN23Q9H3S7 1636 aa22.83■■□□□ 1.25
PHGDH-205ENST00000482968 MYO5CQ9NQX4 1742 aa22.83■■□□□ 1.25
PHGDH-205ENST00000482968 ITGAEP38570 1179 aa22.82■■□□□ 1.24
PHGDH-205ENST00000482968 CDC42BPBQ9Y5S2 1711 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms