RNA–Protein interactions for RNA: ENST00000482420.1

TMEM139-208, Transcript of transmembrane protein 139, human

TSL 1 (best)

Gene TMEM139, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM139-208	ENST00000482420	IGF1R	P08069	1367 aa		33.34	■■■□□ 2.93
TMEM139-208	ENST00000482420	CUL7	Q14999	1698 aa		33.3	■■■□□ 2.92
TMEM139-208	ENST00000482420	KIF13A	Q9H1H9	1805 aa		33.25	■■■□□ 2.91
TMEM139-208	ENST00000482420	KIAA0586	Q9BVV6	1533 aa		33.25	■■■□□ 2.91
TMEM139-208	ENST00000482420	AEBP2	Q6ZN18	517 aa	Predicted RBP	33.21	■■■□□ 2.91
TMEM139-208	ENST00000482420	ADCY10	Q96PN6	1610 aa		33.17	■■■□□ 2.9
TMEM139-208	ENST00000482420	NPM1	P06748	294 aa	Known RBP eCLIP	33.17	■■■□□ 2.9
TMEM139-208	ENST00000482420	CARMIL1	Q5VZK9	1371 aa		33.14	■■■□□ 2.9
TMEM139-208	ENST00000482420	FAM69C	Q0P6D2	419 aa		33.11	■■■□□ 2.89
TMEM139-208	ENST00000482420	MAPKBP1	O60336	1514 aa		33.1	■■■□□ 2.89
TMEM139-208	ENST00000482420	ABCC10	Q5T3U5	1492 aa		33.09	■■■□□ 2.89
TMEM139-208	ENST00000482420	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.05	■■■□□ 2.88
TMEM139-208	ENST00000482420	DIP2B	Q9P265	1576 aa		33.03	■■■□□ 2.88
TMEM139-208	ENST00000482420	PTPRG	P23470	1445 aa		32.99	■■■□□ 2.87
TMEM139-208	ENST00000482420	IQGAP2	Q13576	1575 aa		32.96	■■■□□ 2.87
TMEM139-208	ENST00000482420	CARMIL2	Q6F5E8	1435 aa		32.94	■■■□□ 2.86
TMEM139-208	ENST00000482420	TNIK	Q9UKE5	1360 aa		32.91	■■■□□ 2.86
TMEM139-208	ENST00000482420	TSPOAP1	O95153	1857 aa		32.84	■■■□□ 2.85
TMEM139-208	ENST00000482420	RAPGEF2	Q9Y4G8	1499 aa		32.83	■■■□□ 2.85
TMEM139-208	ENST00000482420	ABCC2	Q92887	1545 aa		32.82	■■■□□ 2.85
TMEM139-208	ENST00000482420	DISP1	Q96F81	1524 aa		32.81	■■■□□ 2.84
TMEM139-208	ENST00000482420	KDM6B	O15054	1643 aa		32.78	■■■□□ 2.84
TMEM139-208	ENST00000482420	ASXL2	Q76L83	1435 aa		32.74	■■■□□ 2.83
TMEM139-208	ENST00000482420	UACA	Q9BZF9	1416 aa		32.73	■■■□□ 2.83
TMEM139-208	ENST00000482420	UHRF1BP1L	A0JNW5	1464 aa		32.72	■■■□□ 2.83
TMEM139-208	ENST00000482420	UGGT2	Q9NYU1	1516 aa		32.72	■■■□□ 2.83
TMEM139-208	ENST00000482420	KIAA0556	O60303	1618 aa		32.68	■■■□□ 2.82
TMEM139-208	ENST00000482420	PLB1	Q6P1J6	1458 aa		32.67	■■■□□ 2.82
TMEM139-208	ENST00000482420	GLI2	P10070	1586 aa		32.6	■■■□□ 2.81
TMEM139-208	ENST00000482420	KDM5B	Q9UGL1	1544 aa		32.59	■■■□□ 2.81
TMEM139-208	ENST00000482420	CTTNBP2	Q8WZ74	1663 aa		32.59	■■■□□ 2.81
TMEM139-208	ENST00000482420	PPRC1	Q5VV67	1664 aa	Known RBP	32.57	■■■□□ 2.8
TMEM139-208	ENST00000482420	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.57	■■■□□ 2.8
TMEM139-208	ENST00000482420	EPRS	P07814	1512 aa	Known RBP	32.53	■■■□□ 2.8
TMEM139-208	ENST00000482420	KDM4F	A0A1W2PPD8	638 aa		32.47	■■■□□ 2.79
TMEM139-208	ENST00000482420	MAP3K4	Q9Y6R4	1608 aa		32.46	■■■□□ 2.79
TMEM139-208	ENST00000482420	PRX	Q9BXM0	1461 aa		32.46	■■■□□ 2.79
TMEM139-208	ENST00000482420	GOLGA3	Q08378	1498 aa		32.45	■■■□□ 2.79
TMEM139-208	ENST00000482420	WDR7	Q9Y4E6	1490 aa		32.4	■■■□□ 2.78
TMEM139-208	ENST00000482420	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.37	■■■□□ 2.77
TMEM139-208	ENST00000482420	TEX14	Q8IWB6	1497 aa		32.36	■■■□□ 2.77
TMEM139-208	ENST00000482420	ABCA8	O94911	1581 aa		32.36	■■■□□ 2.77
TMEM139-208	ENST00000482420	KCNH8	Q96L42	1107 aa		32.27	■■■□□ 2.76
TMEM139-208	ENST00000482420	P3H3	Q8IVL6	736 aa		32.26	■■■□□ 2.75
TMEM139-208	ENST00000482420	ARID3C	A6NKF2	412 aa		32.23	■■■□□ 2.75
TMEM139-208	ENST00000482420	ADGRL1	O94910	1474 aa		32.23	■■■□□ 2.75
TMEM139-208	ENST00000482420	CD109	Q6YHK3	1445 aa		32.21	■■■□□ 2.75
TMEM139-208	ENST00000482420	CFAP43	Q8NDM7	1665 aa		32.19	■■■□□ 2.74
TMEM139-208	ENST00000482420	CSRNP3	Q8WYN3	585 aa		32.19	■■■□□ 2.74
TMEM139-208	ENST00000482420	MAGI3	Q5TCQ9	1506 aa		32.15	■■■□□ 2.74
TMEM139-208	ENST00000482420	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.14	■■■□□ 2.74
TMEM139-208	ENST00000482420	SAMD9	Q5K651	1589 aa		32.1	■■■□□ 2.73
TMEM139-208	ENST00000482420	ATP10B	O94823	1461 aa		32.1	■■■□□ 2.73
TMEM139-208	ENST00000482420	RANGAP1	P46060	587 aa	Predicted RBP	32.07	■■■□□ 2.72
TMEM139-208	ENST00000482420	RAPGEF6	Q8TEU7	1601 aa		32.02	■■■□□ 2.72
TMEM139-208	ENST00000482420	EEA1	Q15075	1411 aa		32	■■■□□ 2.71
TMEM139-208	ENST00000482420	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	31.98	■■■□□ 2.71
TMEM139-208	ENST00000482420	HNRNPUL2	Q1KMD3	747 aa	Known RBP	31.98	■■■□□ 2.71
TMEM139-208	ENST00000482420	FHOD3	Q2V2M9	1422 aa		31.94	■■■□□ 2.7
TMEM139-208	ENST00000482420	ABCA9	Q8IUA7	1624 aa		31.93	■■■□□ 2.7
TMEM139-208	ENST00000482420	NUP153	P49790	1475 aa	Known RBP	31.91	■■■□□ 2.7
TMEM139-208	ENST00000482420	ARAP3	Q8WWN8	1544 aa		31.9	■■■□□ 2.7
TMEM139-208	ENST00000482420	KIF21B	O75037	1637 aa		31.89	■■■□□ 2.7
TMEM139-208	ENST00000482420	HECW2	Q9P2P5	1572 aa		31.81	■■■□□ 2.68
TMEM139-208	ENST00000482420	RAPGEF3	O95398	923 aa		31.79	■■■□□ 2.68
TMEM139-208	ENST00000482420	PHLDB1	Q86UU1	1377 aa		31.78	■■■□□ 2.68
TMEM139-208	ENST00000482420	EHMT2	Q96KQ7	1210 aa		31.77	■■■□□ 2.68
TMEM139-208	ENST00000482420	NEO1	Q92859	1461 aa		31.77	■■■□□ 2.68
TMEM139-208	ENST00000482420	EFCAB5	A4FU69	1503 aa		31.75	■■■□□ 2.67
TMEM139-208	ENST00000482420	PLEKHD1	A6NEE1	506 aa		31.72	■■■□□ 2.67
TMEM139-208	ENST00000482420	FRMPD1	Q5SYB0	1578 aa		31.68	■■■□□ 2.66
TMEM139-208	ENST00000482420	UBTF	P17480	764 aa	Known RBP	31.63	■■■□□ 2.65
TMEM139-208	ENST00000482420	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	31.63	■■■□□ 2.65
TMEM139-208	ENST00000482420	CDK13	Q14004	1512 aa	Known RBP	31.62	■■■□□ 2.65
TMEM139-208	ENST00000482420	TTC37	Q6PGP7	1564 aa		31.6	■■■□□ 2.65
TMEM139-208	ENST00000482420	FANCA	O15360	1455 aa		31.59	■■■□□ 2.65
TMEM139-208	ENST00000482420	ILDR1	Q86SU0	546 aa	Predicted RBP	31.59	■■■□□ 2.65
TMEM139-208	ENST00000482420	ADAMTSL3	P82987	1691 aa		31.57	■■■□□ 2.65
TMEM139-208	ENST00000482420	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.57	■■■□□ 2.64
TMEM139-208	ENST00000482420	DENND4B	O75064	1496 aa	Predicted RBP	31.57	■■■□□ 2.64
TMEM139-208	ENST00000482420	AKNA	Q7Z591	1439 aa		31.57	■■■□□ 2.64
TMEM139-208	ENST00000482420	CFAP74	Q9C0B2	1584 aa		31.56	■■■□□ 2.64
TMEM139-208	ENST00000482420	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.55	■■■□□ 2.64
TMEM139-208	ENST00000482420	PTPRM	P28827	1452 aa		31.54	■■■□□ 2.64
TMEM139-208	ENST00000482420	CHIC1	Q5VXU3	224 aa		31.54	■■■□□ 2.64
TMEM139-208	ENST00000482420	RICTOR	Q6R327	1708 aa		31.54	■■■□□ 2.64
TMEM139-208	ENST00000482420	ARHGEF40	Q8TER5	1519 aa		31.53	■■■□□ 2.64
TMEM139-208	ENST00000482420	BCORL1	Q5H9F3	1711 aa		31.52	■■■□□ 2.64
TMEM139-208	ENST00000482420	ARHGAP35	Q9NRY4	1499 aa		31.49	■■■□□ 2.63
TMEM139-208	ENST00000482420	MADD	Q8WXG6	1647 aa		31.49	■■■□□ 2.63
TMEM139-208	ENST00000482420	HECW1	Q76N89	1606 aa		31.48	■■■□□ 2.63
TMEM139-208	ENST00000482420	FMN1	Q68DA7	1419 aa		31.48	■■■□□ 2.63
TMEM139-208	ENST00000482420	ZMYM4	Q5VZL5	1548 aa		31.4	■■■□□ 2.62
TMEM139-208	ENST00000482420	PLCH2	O75038	1416 aa		31.4	■■■□□ 2.62
TMEM139-208	ENST00000482420	ZFYVE16	Q7Z3T8	1539 aa		31.39	■■■□□ 2.62
TMEM139-208	ENST00000482420	YEATS2	Q9ULM3	1422 aa		31.39	■■■□□ 2.62
TMEM139-208	ENST00000482420	RIMS1	Q86UR5	1692 aa	Known RBP	31.37	■■■□□ 2.61
TMEM139-208	ENST00000482420	SCAPER	Q9BY12	1400 aa		31.36	■■■□□ 2.61
TMEM139-208	ENST00000482420	KIF14	Q15058	1648 aa		31.35	■■■□□ 2.61
TMEM139-208	ENST00000482420	SIGLEC1	Q9BZZ2	1709 aa		31.34	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms