RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 KIAA0586Q9BVV6 1533 aa35.47■■■■□ 3.27
TRA2A-206ENST00000482395 JPH4Q96JJ6 628 aa35.47■■■■□ 3.27
TRA2A-206ENST00000482395 PRG4Q92954 1404 aaPredicted RBP35.47■■■■□ 3.27
TRA2A-206ENST00000482395 TRHP20396 242 aaPredicted RBP35.33■■■■□ 3.25
TRA2A-206ENST00000482395 RAPGEF2Q9Y4G8 1499 aa35.29■■■■□ 3.24
TRA2A-206ENST00000482395 IQGAP2Q13576 1575 aa35.25■■■■□ 3.23
TRA2A-206ENST00000482395 CARMIL2Q6F5E8 1435 aa35.13■■■■□ 3.21
TRA2A-206ENST00000482395 CTTNBP2Q8WZ74 1663 aa35.08■■■■□ 3.21
TRA2A-206ENST00000482395 PRXQ9BXM0 1461 aa35.03■■■■□ 3.2
TRA2A-206ENST00000482395 ADCY10Q96PN6 1610 aa35.03■■■■□ 3.2
TRA2A-206ENST00000482395 UGGT2Q9NYU1 1516 aa35.03■■■■□ 3.2
TRA2A-206ENST00000482395 TNIKQ9UKE5 1360 aa35.01■■■■□ 3.2
TRA2A-206ENST00000482395 PTPRGP23470 1445 aa34.99■■■■□ 3.19
TRA2A-206ENST00000482395 NPM1P06748 294 aaKnown RBP eCLIP34.97■■■■□ 3.19
TRA2A-206ENST00000482395 DISP1Q96F81 1524 aa34.96■■■■□ 3.19
TRA2A-206ENST00000482395 MAPKBP1O60336 1514 aa34.96■■■■□ 3.19
TRA2A-206ENST00000482395 EEA1Q15075 1411 aa34.95■■■■□ 3.19
TRA2A-206ENST00000482395 KIF13AQ9H1H9 1805 aa34.92■■■■□ 3.18
TRA2A-206ENST00000482395 KIAA0556O60303 1618 aa34.91■■■■□ 3.18
TRA2A-206ENST00000482395 CSRNP3Q8WYN3 585 aa34.85■■■■□ 3.17
TRA2A-206ENST00000482395 UHRF1BP1LA0JNW5 1464 aa34.82■■■■□ 3.16
TRA2A-206ENST00000482395 GOLGA3Q08378 1498 aa34.82■■■■□ 3.16
TRA2A-206ENST00000482395 ABCC10Q5T3U5 1492 aa34.8■■■■□ 3.16
TRA2A-206ENST00000482395 ABCC2Q92887 1545 aa34.79■■■■□ 3.16
TRA2A-206ENST00000482395 UACAQ9BZF9 1416 aa34.77■■■■□ 3.16
TRA2A-206ENST00000482395 TTBK1Q5TCY1 1321 aaPredicted RBP34.77■■■■□ 3.16
TRA2A-206ENST00000482395 DIP2BQ9P265 1576 aa34.76■■■■□ 3.16
TRA2A-206ENST00000482395 FAM69CQ0P6D2 419 aa34.65■■■■□ 3.14
TRA2A-206ENST00000482395 KDM5BQ9UGL1 1544 aa34.63■■■■□ 3.13
TRA2A-206ENST00000482395 CHIC1Q5VXU3 224 aa34.62■■■■□ 3.13
TRA2A-206ENST00000482395 PLB1Q6P1J6 1458 aa34.62■■■■□ 3.13
TRA2A-206ENST00000482395 KIF21BO75037 1637 aa34.62■■■■□ 3.13
TRA2A-206ENST00000482395 ZCCHC11Q5TAX3 1644 aaKnown RBP34.58■■■■□ 3.13
TRA2A-206ENST00000482395 ASXL2Q76L83 1435 aa34.56■■■■□ 3.12
TRA2A-206ENST00000482395 SAMD9Q5K651 1589 aa34.54■■■■□ 3.12
TRA2A-206ENST00000482395 ABCA8O94911 1581 aa34.53■■■■□ 3.12
TRA2A-206ENST00000482395 GLI2P10070 1586 aa34.51■■■■□ 3.12
TRA2A-206ENST00000482395 FAM9AQ8IZU1 332 aaPredicted RBP34.51■■■■□ 3.12
TRA2A-206ENST00000482395 TSPOAP1O95153 1857 aa34.48■■■■□ 3.11
TRA2A-206ENST00000482395 EPRSP07814 1512 aaKnown RBP34.39■■■■□ 3.1
TRA2A-206ENST00000482395 WDR7Q9Y4E6 1490 aa34.37■■■■□ 3.09
TRA2A-206ENST00000482395 EFCAB5A4FU69 1503 aa34.34■■■■□ 3.09
TRA2A-206ENST00000482395 MAP3K4Q9Y6R4 1608 aa34.33■■■■□ 3.09
TRA2A-206ENST00000482395 P3H3Q8IVL6 736 aa34.33■■■■□ 3.09
TRA2A-206ENST00000482395 KDM6BO15054 1643 aa34.33■■■■□ 3.09
TRA2A-206ENST00000482395 PPRC1Q5VV67 1664 aaKnown RBP34.31■■■■□ 3.08
TRA2A-206ENST00000482395 RAPGEF6Q8TEU7 1601 aa34.3■■■■□ 3.08
TRA2A-206ENST00000482395 CFAP43Q8NDM7 1665 aa34.22■■■■□ 3.07
TRA2A-206ENST00000482395 FHOD3Q2V2M9 1422 aa34.21■■■■□ 3.07
TRA2A-206ENST00000482395 TEX14Q8IWB6 1497 aa34.21■■■■□ 3.07
TRA2A-206ENST00000482395 ATP10BO94823 1461 aa34.2■■■■□ 3.06
TRA2A-206ENST00000482395 UBTFP17480 764 aaKnown RBP34.18■■■■□ 3.06
TRA2A-206ENST00000482395 RANGAP1P46060 587 aaPredicted RBP34.18■■■■□ 3.06
TRA2A-206ENST00000482395 NUP153P49790 1475 aaKnown RBP34.1■■■■□ 3.05
TRA2A-206ENST00000482395 MAGI3Q5TCQ9 1506 aa34.08■■■■□ 3.05
TRA2A-206ENST00000482395 CD109Q6YHK3 1445 aa34.06■■■■□ 3.04
TRA2A-206ENST00000482395 KCNH8Q96L42 1107 aa34.06■■■■□ 3.04
TRA2A-206ENST00000482395 ARID3CA6NKF2 412 aa34.03■■■■□ 3.04
TRA2A-206ENST00000482395 EHMT2Q96KQ7 1210 aa34.03■■■■□ 3.04
TRA2A-206ENST00000482395 ABCA9Q8IUA7 1624 aa34.01■■■■□ 3.04
TRA2A-206ENST00000482395 ARHGAP35Q9NRY4 1499 aa34■■■■□ 3.03
TRA2A-206ENST00000482395 FMN1Q68DA7 1419 aa33.99■■■■□ 3.03
TRA2A-206ENST00000482395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.97■■■■□ 3.03
TRA2A-206ENST00000482395 HNRNPUL2Q1KMD3 747 aaKnown RBP33.97■■■■□ 3.03
TRA2A-206ENST00000482395 COL17A1Q9UMD9 1497 aaPredicted RBP33.92■■■■□ 3.02
TRA2A-206ENST00000482395 HECW1Q76N89 1606 aa33.92■■■■□ 3.02
TRA2A-206ENST00000482395 AEBP2Q6ZN18 517 aaPredicted RBP33.91■■■■□ 3.02
TRA2A-206ENST00000482395 PLEKHD1A6NEE1 506 aa33.87■■■■□ 3.01
TRA2A-206ENST00000482395 PHLDB1Q86UU1 1377 aa33.83■■■■□ 3.01
TRA2A-206ENST00000482395 CDK13Q14004 1512 aaKnown RBP33.8■■■■□ 3
TRA2A-206ENST00000482395 ARAP3Q8WWN8 1544 aa33.79■■■■□ 3
TRA2A-206ENST00000482395 NEO1Q92859 1461 aa33.77■■■■□ 3
TRA2A-206ENST00000482395 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.72■■■□□ 2.99
TRA2A-206ENST00000482395 CFAP74Q9C0B2 1584 aa33.71■■■□□ 2.99
TRA2A-206ENST00000482395 ATP1B4Q9UN42 357 aaPredicted RBP33.68■■■□□ 2.98
TRA2A-206ENST00000482395 CDK11AQ9UQ88 783 aaPredicted RBP33.68■■■□□ 2.98
TRA2A-206ENST00000482395 TTC37Q6PGP7 1564 aa33.67■■■□□ 2.98
TRA2A-206ENST00000482395 LRRIQ1Q96JM4 1722 aa33.67■■■□□ 2.98
TRA2A-206ENST00000482395 CLIP1P30622 1438 aa33.65■■■□□ 2.98
TRA2A-206ENST00000482395 PCF11O94913 1555 aaKnown RBP33.64■■■□□ 2.98
TRA2A-206ENST00000482395 CASKIN1Q8WXD9 1431 aa33.64■■■□□ 2.98
TRA2A-206ENST00000482395 CCDC18Q5T9S5 1454 aa33.62■■■□□ 2.97
TRA2A-206ENST00000482395 KDM4FA0A1W2PPD8 638 aa33.59■■■□□ 2.97
TRA2A-206ENST00000482395 FANCAO15360 1455 aa33.58■■■□□ 2.97
TRA2A-206ENST00000482395 KIF14Q15058 1648 aa33.58■■■□□ 2.97
TRA2A-206ENST00000482395 FYCO1Q9BQS8 1478 aa33.57■■■□□ 2.97
TRA2A-206ENST00000482395 MYO5CQ9NQX4 1742 aa33.56■■■□□ 2.96
TRA2A-206ENST00000482395 TROQ12816 1431 aaPredicted RBP33.56■■■□□ 2.96
TRA2A-206ENST00000482395 ADGRL1O94910 1474 aa33.54■■■□□ 2.96
TRA2A-206ENST00000482395 AKNAQ7Z591 1439 aa33.53■■■□□ 2.96
TRA2A-206ENST00000482395 FRMPD1Q5SYB0 1578 aa33.51■■■□□ 2.96
TRA2A-206ENST00000482395 PLCH2O75038 1416 aa33.51■■■□□ 2.95
TRA2A-206ENST00000482395 RICTORQ6R327 1708 aa33.5■■■□□ 2.95
TRA2A-206ENST00000482395 DENND4BO75064 1496 aaPredicted RBP33.48■■■□□ 2.95
TRA2A-206ENST00000482395 RAPGEF3O95398 923 aa33.45■■■□□ 2.95
TRA2A-206ENST00000482395 CEP162Q5TB80 1403 aa33.39■■■□□ 2.94
TRA2A-206ENST00000482395 ZMYM4Q5VZL5 1548 aa33.38■■■□□ 2.93
TRA2A-206ENST00000482395 ARHGEF40Q8TER5 1519 aa33.37■■■□□ 2.93
TRA2A-206ENST00000482395 EFCAB2Q5VUJ9 269 aa33.36■■■□□ 2.93
TRA2A-206ENST00000482395 ARHGAP5Q13017 1502 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms