RNA–Protein interactions for RNA: ENST00000482194.1

ITM2A-206, Transcript of integral membrane protein 2A, humanhuman

TSL 2

Gene ITM2A, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-206ENST00000482194 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
ITM2A-206ENST00000482194 GRIN2AQ12879 1464 aa19.27■□□□□ 0.67
ITM2A-206ENST00000482194 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
ITM2A-206ENST00000482194 NUP160Q12769 1436 aa19.23■□□□□ 0.67
ITM2A-206ENST00000482194 PRG4Q92954 1404 aaPredicted RBP19.19■□□□□ 0.66
ITM2A-206ENST00000482194 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
ITM2A-206ENST00000482194 ADCY10Q96PN6 1610 aa19.11■□□□□ 0.65
ITM2A-206ENST00000482194 CUX1P39880 1505 aa19.11■□□□□ 0.65
ITM2A-206ENST00000482194 JPH4Q96JJ6 628 aa19.09■□□□□ 0.65
ITM2A-206ENST00000482194 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
ITM2A-206ENST00000482194 ADAMTS12P58397 1594 aa19.07■□□□□ 0.64
ITM2A-206ENST00000482194 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
ITM2A-206ENST00000482194 PPRC1Q5VV67 1664 aaKnown RBP19.01■□□□□ 0.63
ITM2A-206ENST00000482194 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
ITM2A-206ENST00000482194 COL17A1Q9UMD9 1497 aaPredicted RBP18.99■□□□□ 0.63
ITM2A-206ENST00000482194 GLI2P10070 1586 aa18.92■□□□□ 0.62
ITM2A-206ENST00000482194 SPATA31D1Q6ZQQ2 1576 aa18.9■□□□□ 0.62
ITM2A-206ENST00000482194 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
ITM2A-206ENST00000482194 PLB1Q6P1J6 1458 aa18.86■□□□□ 0.61
ITM2A-206ENST00000482194 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
ITM2A-206ENST00000482194 ASXL2Q76L83 1435 aa18.85■□□□□ 0.61
ITM2A-206ENST00000482194 RUSC2Q8N2Y8 1516 aa18.83■□□□□ 0.6
ITM2A-206ENST00000482194 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
ITM2A-206ENST00000482194 PCF11O94913 1555 aaKnown RBP18.79■□□□□ 0.6
ITM2A-206ENST00000482194 ABCC2Q92887 1545 aa18.78■□□□□ 0.6
ITM2A-206ENST00000482194 MAP3K4Q9Y6R4 1608 aa18.78■□□□□ 0.6
ITM2A-206ENST00000482194 PTPRMP28827 1452 aa18.77■□□□□ 0.6
ITM2A-206ENST00000482194 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
ITM2A-206ENST00000482194 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
ITM2A-206ENST00000482194 KIF21BO75037 1637 aa18.75■□□□□ 0.59
ITM2A-206ENST00000482194 PTPRGP23470 1445 aa18.74■□□□□ 0.59
ITM2A-206ENST00000482194 CUL7Q14999 1698 aa18.72■□□□□ 0.59
ITM2A-206ENST00000482194 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
ITM2A-206ENST00000482194 KIAA0586Q9BVV6 1533 aa18.66■□□□□ 0.58
ITM2A-206ENST00000482194 HSPA2P54652 639 aa18.65■□□□□ 0.58
ITM2A-206ENST00000482194 ADAMTSL3P82987 1691 aa18.65■□□□□ 0.58
ITM2A-206ENST00000482194 TNIKQ9UKE5 1360 aa18.58■□□□□ 0.57
ITM2A-206ENST00000482194 UHRF1BP1LA0JNW5 1464 aa18.58■□□□□ 0.56
ITM2A-206ENST00000482194 CARMIL2Q6F5E8 1435 aa18.54■□□□□ 0.56
ITM2A-206ENST00000482194 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
ITM2A-206ENST00000482194 MADDQ8WXG6 1647 aa18.52■□□□□ 0.56
ITM2A-206ENST00000482194 KDM5BQ9UGL1 1544 aa18.51■□□□□ 0.55
ITM2A-206ENST00000482194 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
ITM2A-206ENST00000482194 MAGI3Q5TCQ9 1506 aa18.5■□□□□ 0.55
ITM2A-206ENST00000482194 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
ITM2A-206ENST00000482194 BCORL1Q5H9F3 1711 aa18.49■□□□□ 0.55
ITM2A-206ENST00000482194 ZCCHC11Q5TAX3 1644 aaKnown RBP18.49■□□□□ 0.55
ITM2A-206ENST00000482194 BIVM-ERCC5R4GMW8 1640 aa18.48■□□□□ 0.55
ITM2A-206ENST00000482194 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
ITM2A-206ENST00000482194 CFAP43Q8NDM7 1665 aa18.46■□□□□ 0.55
ITM2A-206ENST00000482194 WDR7Q9Y4E6 1490 aa18.46■□□□□ 0.54
ITM2A-206ENST00000482194 RIMS1Q86UR5 1692 aaKnown RBP18.44■□□□□ 0.54
ITM2A-206ENST00000482194 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
ITM2A-206ENST00000482194 ARAP3Q8WWN8 1544 aa18.4■□□□□ 0.54
ITM2A-206ENST00000482194 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
ITM2A-206ENST00000482194 YEATS2Q9ULM3 1422 aa18.32■□□□□ 0.52
ITM2A-206ENST00000482194 RAPGEF3O95398 923 aa18.3■□□□□ 0.52
ITM2A-206ENST00000482194 IQGAP2Q13576 1575 aa18.28■□□□□ 0.52
ITM2A-206ENST00000482194 PHLDB1Q86UU1 1377 aa18.27■□□□□ 0.51
ITM2A-206ENST00000482194 DISP1Q96F81 1524 aa18.25■□□□□ 0.51
ITM2A-206ENST00000482194 IGF1RP08069 1367 aa18.25■□□□□ 0.51
ITM2A-206ENST00000482194 IQSEC2Q5JU85 1478 aa18.25■□□□□ 0.51
ITM2A-206ENST00000482194 STRCQ7RTU9 1775 aa18.25■□□□□ 0.51
ITM2A-206ENST00000482194 POGZQ7Z3K3 1410 aa18.22■□□□□ 0.51
ITM2A-206ENST00000482194 PREX1Q8TCU6 1659 aa18.2■□□□□ 0.5
ITM2A-206ENST00000482194 MED1Q15648 1581 aaPredicted RBP18.17■□□□□ 0.5
ITM2A-206ENST00000482194 LTBP4Q8N2S1 1624 aa18.17■□□□□ 0.5
ITM2A-206ENST00000482194 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
ITM2A-206ENST00000482194 PTPRTO14522 1441 aa18.16■□□□□ 0.5
ITM2A-206ENST00000482194 FANCAO15360 1455 aa18.15■□□□□ 0.5
ITM2A-206ENST00000482194 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
ITM2A-206ENST00000482194 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
ITM2A-206ENST00000482194 MLECQ14165 292 aa18.14■□□□□ 0.49
ITM2A-206ENST00000482194 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
ITM2A-206ENST00000482194 FER1L4A9Z1Z3 1794 aa18.14■□□□□ 0.49
ITM2A-206ENST00000482194 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
ITM2A-206ENST00000482194 KIF27Q86VH2 1401 aa18.13■□□□□ 0.49
ITM2A-206ENST00000482194 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
ITM2A-206ENST00000482194 NEO1Q92859 1461 aa18.12■□□□□ 0.49
ITM2A-206ENST00000482194 KIAA0556O60303 1618 aa18.12■□□□□ 0.49
ITM2A-206ENST00000482194 UGGT2Q9NYU1 1516 aa18.09■□□□□ 0.49
ITM2A-206ENST00000482194 UHRF1BP1Q6BDS2 1440 aa18.08■□□□□ 0.49
ITM2A-206ENST00000482194 AKNAQ7Z591 1439 aa18.07■□□□□ 0.48
ITM2A-206ENST00000482194 ABCA9Q8IUA7 1624 aa18.05■□□□□ 0.48
ITM2A-206ENST00000482194 CEBPAP49715 358 aaPredicted RBP18.05■□□□□ 0.48
ITM2A-206ENST00000482194 SETD1BQ9UPS6 1966 aaKnown RBP18.04■□□□□ 0.48
ITM2A-206ENST00000482194 HSPA1LP34931 641 aa18.02■□□□□ 0.48
ITM2A-206ENST00000482194 ABCA8O94911 1581 aa18.01■□□□□ 0.47
ITM2A-206ENST00000482194 SCAF1Q9H7N4 1312 aaKnown RBP18■□□□□ 0.47
ITM2A-206ENST00000482194 SIGLEC1Q9BZZ2 1709 aa18■□□□□ 0.47
ITM2A-206ENST00000482194 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
ITM2A-206ENST00000482194 RICTORQ6R327 1708 aa17.98■□□□□ 0.47
ITM2A-206ENST00000482194 ARID3CA6NKF2 412 aa17.97■□□□□ 0.47
ITM2A-206ENST00000482194 ZFYVE16Q7Z3T8 1539 aa17.96■□□□□ 0.47
ITM2A-206ENST00000482194 EFCAB5A4FU69 1503 aa17.95■□□□□ 0.46
ITM2A-206ENST00000482194 FHOD3Q2V2M9 1422 aa17.94■□□□□ 0.46
ITM2A-206ENST00000482194 ARHGEF12Q9NZN5 1544 aa17.93■□□□□ 0.46
ITM2A-206ENST00000482194 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
ITM2A-206ENST00000482194 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
ITM2A-206ENST00000482194 ZMYM4Q5VZL5 1548 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms