RNA–Protein interactions for RNA: ENST00000482173.5

CHPF2-203, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 4

Gene CHPF2, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-203ENST00000482173 RUSC2Q8N2Y8 1516 aa33.78■■■■□ 3
CHPF2-203ENST00000482173 CUL7Q14999 1698 aa33.67■■■□□ 2.98
CHPF2-203ENST00000482173 KIAA0586Q9BVV6 1533 aa33.65■■■□□ 2.98
CHPF2-203ENST00000482173 CARMIL1Q5VZK9 1371 aa33.58■■■□□ 2.97
CHPF2-203ENST00000482173 NPM1P06748 294 aaKnown RBP eCLIP33.57■■■□□ 2.96
CHPF2-203ENST00000482173 KIF13AQ9H1H9 1805 aa33.52■■■□□ 2.96
CHPF2-203ENST00000482173 ADCY10Q96PN6 1610 aa33.46■■■□□ 2.95
CHPF2-203ENST00000482173 FAM69CQ0P6D2 419 aa33.44■■■□□ 2.94
CHPF2-203ENST00000482173 AEBP2Q6ZN18 517 aaPredicted RBP33.43■■■□□ 2.94
CHPF2-203ENST00000482173 MAPKBP1O60336 1514 aa33.4■■■□□ 2.94
CHPF2-203ENST00000482173 ABCC10Q5T3U5 1492 aa33.4■■■□□ 2.94
CHPF2-203ENST00000482173 PTPRGP23470 1445 aa33.37■■■□□ 2.93
CHPF2-203ENST00000482173 TTBK1Q5TCY1 1321 aaPredicted RBP33.37■■■□□ 2.93
CHPF2-203ENST00000482173 CARMIL2Q6F5E8 1435 aa33.35■■■□□ 2.93
CHPF2-203ENST00000482173 IQGAP2Q13576 1575 aa33.31■■■□□ 2.92
CHPF2-203ENST00000482173 TNIKQ9UKE5 1360 aa33.3■■■□□ 2.92
CHPF2-203ENST00000482173 DIP2BQ9P265 1576 aa33.3■■■□□ 2.92
CHPF2-203ENST00000482173 RAPGEF2Q9Y4G8 1499 aa33.25■■■□□ 2.91
CHPF2-203ENST00000482173 ABCC2Q92887 1545 aa33.16■■■□□ 2.9
CHPF2-203ENST00000482173 DISP1Q96F81 1524 aa33.16■■■□□ 2.9
CHPF2-203ENST00000482173 TSPOAP1O95153 1857 aa33.11■■■□□ 2.89
CHPF2-203ENST00000482173 UGGT2Q9NYU1 1516 aa33.11■■■□□ 2.89
CHPF2-203ENST00000482173 UACAQ9BZF9 1416 aa33.1■■■□□ 2.89
CHPF2-203ENST00000482173 UHRF1BP1LA0JNW5 1464 aa33.09■■■□□ 2.89
CHPF2-203ENST00000482173 ASXL2Q76L83 1435 aa33.06■■■□□ 2.88
CHPF2-203ENST00000482173 PLB1Q6P1J6 1458 aa33.04■■■□□ 2.88
CHPF2-203ENST00000482173 KDM6BO15054 1643 aa33.02■■■□□ 2.88
CHPF2-203ENST00000482173 KIAA0556O60303 1618 aa33■■■□□ 2.87
CHPF2-203ENST00000482173 KDM5BQ9UGL1 1544 aa32.94■■■□□ 2.86
CHPF2-203ENST00000482173 CTTNBP2Q8WZ74 1663 aa32.94■■■□□ 2.86
CHPF2-203ENST00000482173 GLI2P10070 1586 aa32.93■■■□□ 2.86
CHPF2-203ENST00000482173 PRXQ9BXM0 1461 aa32.9■■■□□ 2.86
CHPF2-203ENST00000482173 ZCCHC11Q5TAX3 1644 aaKnown RBP32.87■■■□□ 2.85
CHPF2-203ENST00000482173 GOLGA3Q08378 1498 aa32.86■■■□□ 2.85
CHPF2-203ENST00000482173 EPRSP07814 1512 aaKnown RBP32.85■■■□□ 2.85
CHPF2-203ENST00000482173 PPRC1Q5VV67 1664 aaKnown RBP32.83■■■□□ 2.85
CHPF2-203ENST00000482173 KDM4FA0A1W2PPD8 638 aa32.75■■■□□ 2.83
CHPF2-203ENST00000482173 MAP3K4Q9Y6R4 1608 aa32.74■■■□□ 2.83
CHPF2-203ENST00000482173 WDR7Q9Y4E6 1490 aa32.73■■■□□ 2.83
CHPF2-203ENST00000482173 ABCA8O94911 1581 aa32.71■■■□□ 2.83
CHPF2-203ENST00000482173 CSRNP3Q8WYN3 585 aa32.71■■■□□ 2.83
CHPF2-203ENST00000482173 TEX14Q8IWB6 1497 aa32.68■■■□□ 2.82
CHPF2-203ENST00000482173 COL17A1Q9UMD9 1497 aaPredicted RBP32.67■■■□□ 2.82
CHPF2-203ENST00000482173 P3H3Q8IVL6 736 aa32.66■■■□□ 2.82
CHPF2-203ENST00000482173 FAM9AQ8IZU1 332 aaPredicted RBP32.65■■■□□ 2.82
CHPF2-203ENST00000482173 KCNH8Q96L42 1107 aa32.65■■■□□ 2.82
CHPF2-203ENST00000482173 CD109Q6YHK3 1445 aa32.55■■■□□ 2.8
CHPF2-203ENST00000482173 ARID3CA6NKF2 412 aa32.54■■■□□ 2.8
CHPF2-203ENST00000482173 CFAP43Q8NDM7 1665 aa32.51■■■□□ 2.79
CHPF2-203ENST00000482173 EEA1Q15075 1411 aa32.51■■■□□ 2.79
CHPF2-203ENST00000482173 MAGI3Q5TCQ9 1506 aa32.5■■■□□ 2.79
CHPF2-203ENST00000482173 ATP10BO94823 1461 aa32.48■■■□□ 2.79
CHPF2-203ENST00000482173 SAMD9Q5K651 1589 aa32.47■■■□□ 2.79
CHPF2-203ENST00000482173 ADGRL1O94910 1474 aa32.44■■■□□ 2.78
CHPF2-203ENST00000482173 RANGAP1P46060 587 aaPredicted RBP32.43■■■□□ 2.78
CHPF2-203ENST00000482173 RAPGEF6Q8TEU7 1601 aa32.36■■■□□ 2.77
CHPF2-203ENST00000482173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.35■■■□□ 2.77
CHPF2-203ENST00000482173 HNRNPUL2Q1KMD3 747 aaKnown RBP32.35■■■□□ 2.77
CHPF2-203ENST00000482173 FHOD3Q2V2M9 1422 aa32.29■■■□□ 2.76
CHPF2-203ENST00000482173 ABCA9Q8IUA7 1624 aa32.26■■■□□ 2.76
CHPF2-203ENST00000482173 NUP153P49790 1475 aaKnown RBP32.25■■■□□ 2.75
CHPF2-203ENST00000482173 ARAP3Q8WWN8 1544 aa32.25■■■□□ 2.75
CHPF2-203ENST00000482173 KIF21BO75037 1637 aa32.23■■■□□ 2.75
CHPF2-203ENST00000482173 PHLDB1Q86UU1 1377 aa32.2■■■□□ 2.75
CHPF2-203ENST00000482173 PLEKHD1A6NEE1 506 aa32.16■■■□□ 2.74
CHPF2-203ENST00000482173 EFCAB5A4FU69 1503 aa32.16■■■□□ 2.74
CHPF2-203ENST00000482173 EHMT2Q96KQ7 1210 aa32.13■■■□□ 2.73
CHPF2-203ENST00000482173 NEO1Q92859 1461 aa32.12■■■□□ 2.73
CHPF2-203ENST00000482173 RAPGEF3O95398 923 aa32.11■■■□□ 2.73
CHPF2-203ENST00000482173 UBTFP17480 764 aaKnown RBP32.1■■■□□ 2.73
CHPF2-203ENST00000482173 CHIC1Q5VXU3 224 aa32.1■■■□□ 2.73
CHPF2-203ENST00000482173 HECW2Q9P2P5 1572 aa31.98■■■□□ 2.71
CHPF2-203ENST00000482173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.96■■■□□ 2.71
CHPF2-203ENST00000482173 ATP1B4Q9UN42 357 aaPredicted RBP31.95■■■□□ 2.71
CHPF2-203ENST00000482173 CDK13Q14004 1512 aaKnown RBP31.95■■■□□ 2.7
CHPF2-203ENST00000482173 FRMPD1Q5SYB0 1578 aa31.94■■■□□ 2.7
CHPF2-203ENST00000482173 AKNAQ7Z591 1439 aa31.93■■■□□ 2.7
CHPF2-203ENST00000482173 FANCAO15360 1455 aa31.92■■■□□ 2.7
CHPF2-203ENST00000482173 DENND4BO75064 1496 aaPredicted RBP31.91■■■□□ 2.7
CHPF2-203ENST00000482173 FMN1Q68DA7 1419 aa31.9■■■□□ 2.7
CHPF2-203ENST00000482173 ARHGAP35Q9NRY4 1499 aa31.9■■■□□ 2.7
CHPF2-203ENST00000482173 TTC37Q6PGP7 1564 aa31.9■■■□□ 2.7
CHPF2-203ENST00000482173 ARID4BQ4LE39 1312 aaPredicted RBP31.88■■■□□ 2.69
CHPF2-203ENST00000482173 CFAP74Q9C0B2 1584 aa31.87■■■□□ 2.69
CHPF2-203ENST00000482173 ADAMTSL3P82987 1691 aa31.85■■■□□ 2.69
CHPF2-203ENST00000482173 RICTORQ6R327 1708 aa31.84■■■□□ 2.69
CHPF2-203ENST00000482173 HECW1Q76N89 1606 aa31.82■■■□□ 2.69
CHPF2-203ENST00000482173 PTPRMP28827 1452 aa31.81■■■□□ 2.68
CHPF2-203ENST00000482173 CDK11AQ9UQ88 783 aaPredicted RBP31.81■■■□□ 2.68
CHPF2-203ENST00000482173 BCORL1Q5H9F3 1711 aa31.78■■■□□ 2.68
CHPF2-203ENST00000482173 PLCH2O75038 1416 aa31.78■■■□□ 2.68
CHPF2-203ENST00000482173 ARHGEF40Q8TER5 1519 aa31.78■■■□□ 2.68
CHPF2-203ENST00000482173 ILDR1Q86SU0 546 aaPredicted RBP31.76■■■□□ 2.67
CHPF2-203ENST00000482173 ZMYM4Q5VZL5 1548 aa31.72■■■□□ 2.67
CHPF2-203ENST00000482173 SCAPERQ9BY12 1400 aa31.72■■■□□ 2.67
CHPF2-203ENST00000482173 MADDQ8WXG6 1647 aa31.71■■■□□ 2.67
CHPF2-203ENST00000482173 EFCAB2Q5VUJ9 269 aa31.71■■■□□ 2.67
CHPF2-203ENST00000482173 YEATS2Q9ULM3 1422 aa31.69■■■□□ 2.66
CHPF2-203ENST00000482173 ZFYVE16Q7Z3T8 1539 aa31.68■■■□□ 2.66
CHPF2-203ENST00000482173 MAGI2Q86UL8 1455 aa31.67■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms