RNA–Protein interactions for RNA: ENST00000481997.5

ARPC1B-217, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 945 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-217ENST00000481997 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
ARPC1B-217ENST00000481997 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
ARPC1B-217ENST00000481997 FHAD1B1AJZ9 1412 aa24.14■■□□□ 1.45
ARPC1B-217ENST00000481997 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
ARPC1B-217ENST00000481997 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
ARPC1B-217ENST00000481997 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
ARPC1B-217ENST00000481997 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
ARPC1B-217ENST00000481997 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
ARPC1B-217ENST00000481997 CHMP7Q8WUX9 453 aaPredicted RBP24.08■■□□□ 1.45
ARPC1B-217ENST00000481997 SYNJ2O15056 1496 aa24.01■■□□□ 1.43
ARPC1B-217ENST00000481997 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
ARPC1B-217ENST00000481997 GRIN2AQ12879 1464 aa23.96■■□□□ 1.43
ARPC1B-217ENST00000481997 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
ARPC1B-217ENST00000481997 KDM4FA0A1W2PPD8 638 aa23.94■■□□□ 1.42
ARPC1B-217ENST00000481997 CLIP1P30622 1438 aa23.87■■□□□ 1.41
ARPC1B-217ENST00000481997 NUP160Q12769 1436 aa23.82■■□□□ 1.4
ARPC1B-217ENST00000481997 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
ARPC1B-217ENST00000481997 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
ARPC1B-217ENST00000481997 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
ARPC1B-217ENST00000481997 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
ARPC1B-217ENST00000481997 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
ARPC1B-217ENST00000481997 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
ARPC1B-217ENST00000481997 EFCAB5A4FU69 1503 aa23.73■■□□□ 1.39
ARPC1B-217ENST00000481997 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
ARPC1B-217ENST00000481997 FAM69CQ0P6D2 419 aa23.68■■□□□ 1.38
ARPC1B-217ENST00000481997 SAMD9Q5K651 1589 aa23.68■■□□□ 1.38
ARPC1B-217ENST00000481997 ERCC6L2Q5T890 1561 aa23.63■■□□□ 1.37
ARPC1B-217ENST00000481997 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
ARPC1B-217ENST00000481997 KDM6BO15054 1643 aa23.59■■□□□ 1.37
ARPC1B-217ENST00000481997 FBXO41Q8TF61 875 aa23.58■■□□□ 1.37
ARPC1B-217ENST00000481997 JPH4Q96JJ6 628 aa23.58■■□□□ 1.37
ARPC1B-217ENST00000481997 FHOD3Q2V2M9 1422 aa23.58■■□□□ 1.36
ARPC1B-217ENST00000481997 P3H3Q8IVL6 736 aa23.57■■□□□ 1.36
ARPC1B-217ENST00000481997 KIAA0556O60303 1618 aa23.56■■□□□ 1.36
ARPC1B-217ENST00000481997 SHROOM2Q13796 1616 aa23.56■■□□□ 1.36
ARPC1B-217ENST00000481997 DISP1Q96F81 1524 aa23.56■■□□□ 1.36
ARPC1B-217ENST00000481997 ABCC10Q5T3U5 1492 aa23.55■■□□□ 1.36
ARPC1B-217ENST00000481997 NPM1P06748 294 aaKnown RBP eCLIP23.54■■□□□ 1.36
ARPC1B-217ENST00000481997 CARMIL2Q6F5E8 1435 aa23.51■■□□□ 1.35
ARPC1B-217ENST00000481997 HECW2Q9P2P5 1572 aa23.49■■□□□ 1.35
ARPC1B-217ENST00000481997 FMN1Q68DA7 1419 aa23.49■■□□□ 1.35
ARPC1B-217ENST00000481997 PRG4Q92954 1404 aaPredicted RBP23.48■■□□□ 1.35
ARPC1B-217ENST00000481997 ADGRL1O94910 1474 aa23.43■■□□□ 1.34
ARPC1B-217ENST00000481997 PCF11O94913 1555 aaKnown RBP23.42■■□□□ 1.34
ARPC1B-217ENST00000481997 FYCO1Q9BQS8 1478 aa23.4■■□□□ 1.34
ARPC1B-217ENST00000481997 CASKIN1Q8WXD9 1431 aa23.4■■□□□ 1.34
ARPC1B-217ENST00000481997 DIP2BQ9P265 1576 aa23.39■■□□□ 1.33
ARPC1B-217ENST00000481997 MAPKBP1O60336 1514 aa23.35■■□□□ 1.33
ARPC1B-217ENST00000481997 APLP2Q06481 763 aa23.35■■□□□ 1.33
ARPC1B-217ENST00000481997 LMTK3Q96Q04 1460 aa23.34■■□□□ 1.33
ARPC1B-217ENST00000481997 TSPOAP1O95153 1857 aa23.32■■□□□ 1.32
ARPC1B-217ENST00000481997 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
ARPC1B-217ENST00000481997 RAPGEF6Q8TEU7 1601 aa23.3■■□□□ 1.32
ARPC1B-217ENST00000481997 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
ARPC1B-217ENST00000481997 PTPRGP23470 1445 aa23.3■■□□□ 1.32
ARPC1B-217ENST00000481997 TTBK1Q5TCY1 1321 aaPredicted RBP23.3■■□□□ 1.32
ARPC1B-217ENST00000481997 ATP1B4Q9UN42 357 aaPredicted RBP23.28■■□□□ 1.32
ARPC1B-217ENST00000481997 CFAP43Q8NDM7 1665 aa23.28■■□□□ 1.32
ARPC1B-217ENST00000481997 TIAM1Q13009 1591 aa23.27■■□□□ 1.32
ARPC1B-217ENST00000481997 LRRIQ1Q96JM4 1722 aa23.27■■□□□ 1.32
ARPC1B-217ENST00000481997 ABCA8O94911 1581 aa23.25■■□□□ 1.31
ARPC1B-217ENST00000481997 PLB1Q6P1J6 1458 aa23.24■■□□□ 1.31
ARPC1B-217ENST00000481997 CCDC18Q5T9S5 1454 aa23.23■■□□□ 1.31
ARPC1B-217ENST00000481997 PPARGC1BQ86YN6 1023 aaKnown RBP23.22■■□□□ 1.31
ARPC1B-217ENST00000481997 NUP153P49790 1475 aaKnown RBP23.2■■□□□ 1.3
ARPC1B-217ENST00000481997 EPRSP07814 1512 aaKnown RBP23.19■■□□□ 1.3
ARPC1B-217ENST00000481997 SOCS7O14512 581 aa23.18■■□□□ 1.3
ARPC1B-217ENST00000481997 UACAQ9BZF9 1416 aa23.16■■□□□ 1.3
ARPC1B-217ENST00000481997 TRIM26Q12899 539 aaPredicted RBP23.15■■□□□ 1.3
ARPC1B-217ENST00000481997 KANK4Q5T7N3 995 aaPredicted RBP23.15■■□□□ 1.3
ARPC1B-217ENST00000481997 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
ARPC1B-217ENST00000481997 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
ARPC1B-217ENST00000481997 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
ARPC1B-217ENST00000481997 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
ARPC1B-217ENST00000481997 UHRF1BP1LA0JNW5 1464 aa23.1■■□□□ 1.29
ARPC1B-217ENST00000481997 ARID3CA6NKF2 412 aa23.08■■□□□ 1.29
ARPC1B-217ENST00000481997 MTUS2Q5JR59 1369 aa23.06■■□□□ 1.28
ARPC1B-217ENST00000481997 EHBP1L1Q8N3D4 1523 aa23.06■■□□□ 1.28
ARPC1B-217ENST00000481997 ATP10BO94823 1461 aa23.05■■□□□ 1.28
ARPC1B-217ENST00000481997 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
ARPC1B-217ENST00000481997 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
ARPC1B-217ENST00000481997 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
ARPC1B-217ENST00000481997 ILDR2Q71H61 639 aa23.02■■□□□ 1.28
ARPC1B-217ENST00000481997 CDK11AQ9UQ88 783 aaPredicted RBP23.02■■□□□ 1.28
ARPC1B-217ENST00000481997 SUPT6HQ7KZ85 1726 aaKnown RBP23■■□□□ 1.27
ARPC1B-217ENST00000481997 DISP3Q9P2K9 1392 aa22.99■■□□□ 1.27
ARPC1B-217ENST00000481997 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
ARPC1B-217ENST00000481997 ZCCHC11Q5TAX3 1644 aaKnown RBP22.97■■□□□ 1.27
ARPC1B-217ENST00000481997 PCGF6Q9BYE7 350 aa22.96■■□□□ 1.27
ARPC1B-217ENST00000481997 TROQ12816 1431 aaPredicted RBP22.96■■□□□ 1.27
ARPC1B-217ENST00000481997 PLEKHD1A6NEE1 506 aa22.93■■□□□ 1.26
ARPC1B-217ENST00000481997 NCOA2Q15596 1464 aa22.92■■□□□ 1.26
ARPC1B-217ENST00000481997 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
ARPC1B-217ENST00000481997 PPRC1Q5VV67 1664 aaKnown RBP22.91■■□□□ 1.26
ARPC1B-217ENST00000481997 GLI2P10070 1586 aa22.89■■□□□ 1.26
ARPC1B-217ENST00000481997 PHLDB1Q86UU1 1377 aa22.89■■□□□ 1.25
ARPC1B-217ENST00000481997 KIF14Q15058 1648 aa22.86■■□□□ 1.25
ARPC1B-217ENST00000481997 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
ARPC1B-217ENST00000481997 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
ARPC1B-217ENST00000481997 RRBP1Q9P2E9 1410 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms