RNA–Protein interactions for RNA: ENST00000481628.1

CLIP4-210, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-210ENST00000481628 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
CLIP4-210ENST00000481628 IGF1RP08069 1367 aa16.12■□□□□ 0.17
CLIP4-210ENST00000481628 KIAA0586Q9BVV6 1533 aa16.11■□□□□ 0.17
CLIP4-210ENST00000481628 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
CLIP4-210ENST00000481628 MAPKBP1O60336 1514 aa16.08■□□□□ 0.16
CLIP4-210ENST00000481628 ADCY10Q96PN6 1610 aa16.05■□□□□ 0.16
CLIP4-210ENST00000481628 ABCC10Q5T3U5 1492 aa16.03■□□□□ 0.16
CLIP4-210ENST00000481628 DIP2BQ9P265 1576 aa16■□□□□ 0.15
CLIP4-210ENST00000481628 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
CLIP4-210ENST00000481628 IQGAP2Q13576 1575 aa15.95■□□□□ 0.14
CLIP4-210ENST00000481628 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLIP4-210ENST00000481628 TNIKQ9UKE5 1360 aa15.91■□□□□ 0.14
CLIP4-210ENST00000481628 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
CLIP4-210ENST00000481628 PTPRGP23470 1445 aa15.91■□□□□ 0.14
CLIP4-210ENST00000481628 CARMIL2Q6F5E8 1435 aa15.91■□□□□ 0.14
CLIP4-210ENST00000481628 AEBP2Q6ZN18 517 aaPredicted RBP15.9■□□□□ 0.14
CLIP4-210ENST00000481628 ABCC2Q92887 1545 aa15.89■□□□□ 0.13
CLIP4-210ENST00000481628 UHRF1BP1LA0JNW5 1464 aa15.89■□□□□ 0.13
CLIP4-210ENST00000481628 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
CLIP4-210ENST00000481628 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
CLIP4-210ENST00000481628 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
CLIP4-210ENST00000481628 GLI2P10070 1586 aa15.83■□□□□ 0.13
CLIP4-210ENST00000481628 KDM6BO15054 1643 aa15.83■□□□□ 0.13
CLIP4-210ENST00000481628 UACAQ9BZF9 1416 aa15.82■□□□□ 0.12
CLIP4-210ENST00000481628 PLB1Q6P1J6 1458 aa15.82■□□□□ 0.12
CLIP4-210ENST00000481628 KIAA0556O60303 1618 aa15.81■□□□□ 0.12
CLIP4-210ENST00000481628 ASXL2Q76L83 1435 aa15.81■□□□□ 0.12
CLIP4-210ENST00000481628 KDM5BQ9UGL1 1544 aa15.81■□□□□ 0.12
CLIP4-210ENST00000481628 PPRC1Q5VV67 1664 aaKnown RBP15.79■□□□□ 0.12
CLIP4-210ENST00000481628 TSPOAP1O95153 1857 aa15.77■□□□□ 0.11
CLIP4-210ENST00000481628 CTTNBP2Q8WZ74 1663 aa15.76■□□□□ 0.11
CLIP4-210ENST00000481628 ZCCHC11Q5TAX3 1644 aaKnown RBP15.74■□□□□ 0.11
CLIP4-210ENST00000481628 EPRSP07814 1512 aaKnown RBP15.73■□□□□ 0.11
CLIP4-210ENST00000481628 PRXQ9BXM0 1461 aa15.73■□□□□ 0.11
CLIP4-210ENST00000481628 MAP3K4Q9Y6R4 1608 aa15.73■□□□□ 0.11
CLIP4-210ENST00000481628 TTBK1Q5TCY1 1321 aaPredicted RBP15.7■□□□□ 0.1
CLIP4-210ENST00000481628 GOLGA3Q08378 1498 aa15.7■□□□□ 0.1
CLIP4-210ENST00000481628 ABCA8O94911 1581 aa15.68■□□□□ 0.1
CLIP4-210ENST00000481628 WDR7Q9Y4E6 1490 aa15.67■□□□□ 0.1
CLIP4-210ENST00000481628 TEX14Q8IWB6 1497 aa15.66■□□□□ 0.1
CLIP4-210ENST00000481628 KDM4FA0A1W2PPD8 638 aa15.65■□□□□ 0.1
CLIP4-210ENST00000481628 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
CLIP4-210ENST00000481628 MAGI3Q5TCQ9 1506 aa15.6■□□□□ 0.09
CLIP4-210ENST00000481628 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
CLIP4-210ENST00000481628 SAMD9Q5K651 1589 aa15.57■□□□□ 0.08
CLIP4-210ENST00000481628 ADGRL1O94910 1474 aa15.55■□□□□ 0.08
CLIP4-210ENST00000481628 CD109Q6YHK3 1445 aa15.54■□□□□ 0.08
CLIP4-210ENST00000481628 EEA1Q15075 1411 aa15.52■□□□□ 0.08
CLIP4-210ENST00000481628 ATP10BO94823 1461 aa15.51■□□□□ 0.07
CLIP4-210ENST00000481628 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
CLIP4-210ENST00000481628 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
CLIP4-210ENST00000481628 ARAP3Q8WWN8 1544 aa15.48■□□□□ 0.07
CLIP4-210ENST00000481628 RAPGEF6Q8TEU7 1601 aa15.47■□□□□ 0.07
CLIP4-210ENST00000481628 KCNH8Q96L42 1107 aa15.43■□□□□ 0.06
CLIP4-210ENST00000481628 PHLDB1Q86UU1 1377 aa15.43■□□□□ 0.06
CLIP4-210ENST00000481628 NUP153P49790 1475 aaKnown RBP15.43■□□□□ 0.06
CLIP4-210ENST00000481628 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
CLIP4-210ENST00000481628 P3H3Q8IVL6 736 aa15.41■□□□□ 0.06
CLIP4-210ENST00000481628 KIF21BO75037 1637 aa15.41■□□□□ 0.06
CLIP4-210ENST00000481628 NEO1Q92859 1461 aa15.4■□□□□ 0.06
CLIP4-210ENST00000481628 EFCAB5A4FU69 1503 aa15.39■□□□□ 0.05
CLIP4-210ENST00000481628 FHOD3Q2V2M9 1422 aa15.37■□□□□ 0.05
CLIP4-210ENST00000481628 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
CLIP4-210ENST00000481628 FRMPD1Q5SYB0 1578 aa15.36■□□□□ 0.05
CLIP4-210ENST00000481628 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
CLIP4-210ENST00000481628 ADAMTSL3P82987 1691 aa15.31■□□□□ 0.04
CLIP4-210ENST00000481628 CFAP74Q9C0B2 1584 aa15.29■□□□□ 0.04
CLIP4-210ENST00000481628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLIP4-210ENST00000481628 ARHGEF40Q8TER5 1519 aa15.28■□□□□ 0.04
CLIP4-210ENST00000481628 RICTORQ6R327 1708 aa15.27■□□□□ 0.04
CLIP4-210ENST00000481628 TTC37Q6PGP7 1564 aa15.27■□□□□ 0.03
CLIP4-210ENST00000481628 RAPGEF3O95398 923 aa15.26■□□□□ 0.03
CLIP4-210ENST00000481628 ZMYM4Q5VZL5 1548 aa15.26■□□□□ 0.03
CLIP4-210ENST00000481628 BCORL1Q5H9F3 1711 aa15.26■□□□□ 0.03
CLIP4-210ENST00000481628 PLEKHD1A6NEE1 506 aa15.25■□□□□ 0.03
CLIP4-210ENST00000481628 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
CLIP4-210ENST00000481628 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
CLIP4-210ENST00000481628 FANCAO15360 1455 aa15.25■□□□□ 0.03
CLIP4-210ENST00000481628 DENND4BO75064 1496 aaPredicted RBP15.25■□□□□ 0.03
CLIP4-210ENST00000481628 PTPRMP28827 1452 aa15.24■□□□□ 0.03
CLIP4-210ENST00000481628 AKNAQ7Z591 1439 aa15.24■□□□□ 0.03
CLIP4-210ENST00000481628 CDK13Q14004 1512 aaKnown RBP15.23■□□□□ 0.03
CLIP4-210ENST00000481628 FMN1Q68DA7 1419 aa15.22■□□□□ 0.03
CLIP4-210ENST00000481628 HECW1Q76N89 1606 aa15.21■□□□□ 0.03
CLIP4-210ENST00000481628 ARHGAP35Q9NRY4 1499 aa15.21■□□□□ 0.03
CLIP4-210ENST00000481628 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
CLIP4-210ENST00000481628 MADDQ8WXG6 1647 aa15.2■□□□□ 0.02
CLIP4-210ENST00000481628 MAGI2Q86UL8 1455 aa15.2■□□□□ 0.02
CLIP4-210ENST00000481628 PLCH2O75038 1416 aa15.18■□□□□ 0.02
CLIP4-210ENST00000481628 ZFYVE16Q7Z3T8 1539 aa15.17■□□□□ 0.02
CLIP4-210ENST00000481628 ILDR1Q86SU0 546 aaPredicted RBP15.17■□□□□ 0.02
CLIP4-210ENST00000481628 POGZQ7Z3K3 1410 aa15.17■□□□□ 0.02
CLIP4-210ENST00000481628 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
CLIP4-210ENST00000481628 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
CLIP4-210ENST00000481628 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
CLIP4-210ENST00000481628 PCF11O94913 1555 aaKnown RBP15.14■□□□□ 0.01
CLIP4-210ENST00000481628 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
CLIP4-210ENST00000481628 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
CLIP4-210ENST00000481628 KIF14Q15058 1648 aa15.13■□□□□ 0.01
CLIP4-210ENST00000481628 LMTK3Q96Q04 1460 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms