RNA–Protein interactions for RNA: ENST00000481518.1

PSME4-208, Transcript of proteasome activator subunit 4, humanhuman

TSL 5

Gene PSME4, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-208ENST00000481518 JPH4Q96JJ6 628 aa39.58■■■■□ 3.93
PSME4-208ENST00000481518 CARMIL1Q5VZK9 1371 aa39.57■■■■□ 3.92
PSME4-208ENST00000481518 KIAA0586Q9BVV6 1533 aa39.5■■■■□ 3.91
PSME4-208ENST00000481518 TRHP20396 242 aaPredicted RBP39.48■■■■□ 3.91
PSME4-208ENST00000481518 RAPGEF2Q9Y4G8 1499 aa39.28■■■■□ 3.88
PSME4-208ENST00000481518 IQGAP2Q13576 1575 aa39.23■■■■□ 3.87
PSME4-208ENST00000481518 ADCY10Q96PN6 1610 aa39.11■■■■□ 3.85
PSME4-208ENST00000481518 PRXQ9BXM0 1461 aa39.05■■■■□ 3.84
PSME4-208ENST00000481518 CARMIL2Q6F5E8 1435 aa39.05■■■■□ 3.84
PSME4-208ENST00000481518 DISP1Q96F81 1524 aa39.03■■■■□ 3.84
PSME4-208ENST00000481518 UGGT2Q9NYU1 1516 aa39.01■■■■□ 3.84
PSME4-208ENST00000481518 PTPRGP23470 1445 aa39.01■■■■□ 3.84
PSME4-208ENST00000481518 TNIKQ9UKE5 1360 aa38.99■■■■□ 3.83
PSME4-208ENST00000481518 CTTNBP2Q8WZ74 1663 aa38.97■■■■□ 3.83
PSME4-208ENST00000481518 TTBK1Q5TCY1 1321 aaPredicted RBP38.95■■■■□ 3.83
PSME4-208ENST00000481518 MAPKBP1O60336 1514 aa38.91■■■■□ 3.82
PSME4-208ENST00000481518 NPM1P06748 294 aaKnown RBP eCLIP38.9■■■■□ 3.82
PSME4-208ENST00000481518 KIF13AQ9H1H9 1805 aa38.9■■■■□ 3.82
PSME4-208ENST00000481518 KIAA0556O60303 1618 aa38.89■■■■□ 3.82
PSME4-208ENST00000481518 CSRNP3Q8WYN3 585 aa38.83■■■■□ 3.81
PSME4-208ENST00000481518 ABCC10Q5T3U5 1492 aa38.79■■■■□ 3.8
PSME4-208ENST00000481518 EEA1Q15075 1411 aa38.76■■■■□ 3.8
PSME4-208ENST00000481518 ABCC2Q92887 1545 aa38.76■■■■□ 3.8
PSME4-208ENST00000481518 DIP2BQ9P265 1576 aa38.75■■■■□ 3.79
PSME4-208ENST00000481518 UHRF1BP1LA0JNW5 1464 aa38.75■■■■□ 3.79
PSME4-208ENST00000481518 UACAQ9BZF9 1416 aa38.75■■■■□ 3.79
PSME4-208ENST00000481518 FAM69CQ0P6D2 419 aa38.7■■■■□ 3.79
PSME4-208ENST00000481518 GOLGA3Q08378 1498 aa38.68■■■■□ 3.78
PSME4-208ENST00000481518 CHIC1Q5VXU3 224 aa38.64■■■■□ 3.78
PSME4-208ENST00000481518 FAM9AQ8IZU1 332 aaPredicted RBP38.63■■■■□ 3.77
PSME4-208ENST00000481518 KDM5BQ9UGL1 1544 aa38.58■■■■□ 3.77
PSME4-208ENST00000481518 ASXL2Q76L83 1435 aa38.58■■■■□ 3.77
PSME4-208ENST00000481518 PLB1Q6P1J6 1458 aa38.57■■■■□ 3.76
PSME4-208ENST00000481518 ZCCHC11Q5TAX3 1644 aaKnown RBP38.53■■■■□ 3.76
PSME4-208ENST00000481518 ABCA8O94911 1581 aa38.5■■■■□ 3.75
PSME4-208ENST00000481518 KIF21BO75037 1637 aa38.48■■■■□ 3.75
PSME4-208ENST00000481518 SAMD9Q5K651 1589 aa38.46■■■■□ 3.75
PSME4-208ENST00000481518 P3H3Q8IVL6 736 aa38.43■■■■□ 3.74
PSME4-208ENST00000481518 TSPOAP1O95153 1857 aa38.41■■■■□ 3.74
PSME4-208ENST00000481518 GLI2P10070 1586 aa38.4■■■■□ 3.74
PSME4-208ENST00000481518 EPRSP07814 1512 aaKnown RBP38.35■■■■□ 3.73
PSME4-208ENST00000481518 PPRC1Q5VV67 1664 aaKnown RBP38.3■■■■□ 3.72
PSME4-208ENST00000481518 WDR7Q9Y4E6 1490 aa38.29■■■■□ 3.72
PSME4-208ENST00000481518 RANGAP1P46060 587 aaPredicted RBP38.28■■■■□ 3.72
PSME4-208ENST00000481518 KDM6BO15054 1643 aa38.24■■■■□ 3.71
PSME4-208ENST00000481518 MAP3K4Q9Y6R4 1608 aa38.24■■■■□ 3.71
PSME4-208ENST00000481518 FHOD3Q2V2M9 1422 aa38.21■■■■□ 3.71
PSME4-208ENST00000481518 EHMT2Q96KQ7 1210 aa38.2■■■■□ 3.71
PSME4-208ENST00000481518 RAPGEF6Q8TEU7 1601 aa38.17■■■■□ 3.7
PSME4-208ENST00000481518 ARID3CA6NKF2 412 aa38.17■■■■□ 3.7
PSME4-208ENST00000481518 ATP10BO94823 1461 aa38.16■■■■□ 3.7
PSME4-208ENST00000481518 EFCAB5A4FU69 1503 aa38.14■■■■□ 3.7
PSME4-208ENST00000481518 UBTFP17480 764 aaKnown RBP38.09■■■■□ 3.69
PSME4-208ENST00000481518 KCNH8Q96L42 1107 aa38.06■■■■□ 3.68
PSME4-208ENST00000481518 NUP153P49790 1475 aaKnown RBP38.06■■■■□ 3.68
PSME4-208ENST00000481518 TEX14Q8IWB6 1497 aa38.02■■■■□ 3.68
PSME4-208ENST00000481518 CFAP43Q8NDM7 1665 aa38.01■■■■□ 3.68
PSME4-208ENST00000481518 COL17A1Q9UMD9 1497 aaPredicted RBP37.99■■■■□ 3.67
PSME4-208ENST00000481518 CD109Q6YHK3 1445 aa37.97■■■■□ 3.67
PSME4-208ENST00000481518 MAGI3Q5TCQ9 1506 aa37.94■■■■□ 3.66
PSME4-208ENST00000481518 ARHGAP35Q9NRY4 1499 aa37.93■■■■□ 3.66
PSME4-208ENST00000481518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.88■■■■□ 3.65
PSME4-208ENST00000481518 HNRNPUL2Q1KMD3 747 aaKnown RBP37.88■■■■□ 3.65
PSME4-208ENST00000481518 ABCA9Q8IUA7 1624 aa37.86■■■■□ 3.65
PSME4-208ENST00000481518 AEBP2Q6ZN18 517 aaPredicted RBP37.83■■■■□ 3.65
PSME4-208ENST00000481518 FMN1Q68DA7 1419 aa37.76■■■■□ 3.63
PSME4-208ENST00000481518 CDK13Q14004 1512 aaKnown RBP37.76■■■■□ 3.63
PSME4-208ENST00000481518 PLEKHD1A6NEE1 506 aa37.69■■■■□ 3.62
PSME4-208ENST00000481518 HECW1Q76N89 1606 aa37.69■■■■□ 3.62
PSME4-208ENST00000481518 ARAP3Q8WWN8 1544 aa37.62■■■■□ 3.61
PSME4-208ENST00000481518 KDM4FA0A1W2PPD8 638 aa37.62■■■■□ 3.61
PSME4-208ENST00000481518 ATP1B4Q9UN42 357 aaPredicted RBP37.61■■■■□ 3.61
PSME4-208ENST00000481518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.61■■■■□ 3.619e-33■■■□□ 14.7
PSME4-208ENST00000481518 TTC37Q6PGP7 1564 aa37.57■■■■□ 3.6
PSME4-208ENST00000481518 NEO1Q92859 1461 aa37.56■■■■□ 3.6
PSME4-208ENST00000481518 LRRIQ1Q96JM4 1722 aa37.55■■■■□ 3.6
PSME4-208ENST00000481518 PHLDB1Q86UU1 1377 aa37.54■■■■□ 3.6
PSME4-208ENST00000481518 PCF11O94913 1555 aaKnown RBP37.51■■■■□ 3.6
PSME4-208ENST00000481518 CLIP1P30622 1438 aa37.49■■■■□ 3.59
PSME4-208ENST00000481518 ADGRL1O94910 1474 aa37.47■■■■□ 3.59
PSME4-208ENST00000481518 CASKIN1Q8WXD9 1431 aa37.45■■■■□ 3.59
PSME4-208ENST00000481518 FRMPD1Q5SYB0 1578 aa37.43■■■■□ 3.58
PSME4-208ENST00000481518 FANCAO15360 1455 aa37.42■■■■□ 3.58
PSME4-208ENST00000481518 RAPGEF3O95398 923 aa37.42■■■■□ 3.58
PSME4-208ENST00000481518 KIF14Q15058 1648 aa37.4■■■■□ 3.58
PSME4-208ENST00000481518 CFAP74Q9C0B2 1584 aa37.38■■■■□ 3.58
PSME4-208ENST00000481518 TROQ12816 1431 aaPredicted RBP37.38■■■■□ 3.57
PSME4-208ENST00000481518 CDK11AQ9UQ88 783 aaPredicted RBP37.38■■■■□ 3.57
PSME4-208ENST00000481518 AKNAQ7Z591 1439 aa37.37■■■■□ 3.57
PSME4-208ENST00000481518 FYCO1Q9BQS8 1478 aa37.33■■■■□ 3.57
PSME4-208ENST00000481518 PLCH2O75038 1416 aa37.33■■■■□ 3.57
PSME4-208ENST00000481518 CCDC18Q5T9S5 1454 aa37.33■■■■□ 3.57
PSME4-208ENST00000481518 DENND4BO75064 1496 aaPredicted RBP37.3■■■■□ 3.56
PSME4-208ENST00000481518 RICTORQ6R327 1708 aa37.3■■■■□ 3.56
PSME4-208ENST00000481518 MYO5CQ9NQX4 1742 aa37.29■■■■□ 3.56
PSME4-208ENST00000481518 CEP162Q5TB80 1403 aa37.21■■■■□ 3.55
PSME4-208ENST00000481518 ARHGEF40Q8TER5 1519 aa37.16■■■■□ 3.54
PSME4-208ENST00000481518 SCAPERQ9BY12 1400 aa37.16■■■■□ 3.54
PSME4-208ENST00000481518 ZMYM4Q5VZL5 1548 aa37.15■■■■□ 3.54
PSME4-208ENST00000481518 EFCAB2Q5VUJ9 269 aa37.14■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms