RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 ERCC6L2Q5T890 1561 aa18.14■□□□□ 0.49
SSBP1-210ENST00000481508 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
SSBP1-210ENST00000481508 ERICH3Q5RHP9 1530 aa18.13■□□□□ 0.49
SSBP1-210ENST00000481508 RUSC2Q8N2Y8 1516 aa18.08■□□□□ 0.48
SSBP1-210ENST00000481508 KIF27Q86VH2 1401 aa18.07■□□□□ 0.48
SSBP1-210ENST00000481508 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
SSBP1-210ENST00000481508 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
SSBP1-210ENST00000481508 GRIN2AQ12879 1464 aa18.03■□□□□ 0.48
SSBP1-210ENST00000481508 IGF1RP08069 1367 aa18.03■□□□□ 0.48
SSBP1-210ENST00000481508 CUL7Q14999 1698 aa18.02■□□□□ 0.47
SSBP1-210ENST00000481508 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
SSBP1-210ENST00000481508 NUP160Q12769 1436 aa17.95■□□□□ 0.46
SSBP1-210ENST00000481508 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
SSBP1-210ENST00000481508 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
SSBP1-210ENST00000481508 KDM4FA0A1W2PPD8 638 aa17.89■□□□□ 0.45
SSBP1-210ENST00000481508 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
SSBP1-210ENST00000481508 KDM6BO15054 1643 aa17.86■□□□□ 0.45
SSBP1-210ENST00000481508 DIP2BQ9P265 1576 aa17.83■□□□□ 0.44
SSBP1-210ENST00000481508 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
SSBP1-210ENST00000481508 PRXQ9BXM0 1461 aa17.81■□□□□ 0.44
SSBP1-210ENST00000481508 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.43
SSBP1-210ENST00000481508 FAM9AQ8IZU1 332 aaPredicted RBP17.76■□□□□ 0.43
SSBP1-210ENST00000481508 HECW2Q9P2P5 1572 aa17.75■□□□□ 0.43
SSBP1-210ENST00000481508 EEA1Q15075 1411 aa17.75■□□□□ 0.43
SSBP1-210ENST00000481508 CTTNBP2Q8WZ74 1663 aa17.75■□□□□ 0.43
SSBP1-210ENST00000481508 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SSBP1-210ENST00000481508 ABCC10Q5T3U5 1492 aa17.74■□□□□ 0.43
SSBP1-210ENST00000481508 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
SSBP1-210ENST00000481508 JPH4Q96JJ6 628 aa17.71■□□□□ 0.43
SSBP1-210ENST00000481508 ADCY10Q96PN6 1610 aa17.71■□□□□ 0.43
SSBP1-210ENST00000481508 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
SSBP1-210ENST00000481508 MAPKBP1O60336 1514 aa17.69■□□□□ 0.42
SSBP1-210ENST00000481508 FAM69CQ0P6D2 419 aa17.69■□□□□ 0.42
SSBP1-210ENST00000481508 KIF21BO75037 1637 aa17.68■□□□□ 0.42
SSBP1-210ENST00000481508 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
SSBP1-210ENST00000481508 ADGRL1O94910 1474 aa17.66■□□□□ 0.42
SSBP1-210ENST00000481508 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
SSBP1-210ENST00000481508 UGGT2Q9NYU1 1516 aa17.62■□□□□ 0.41
SSBP1-210ENST00000481508 DISP1Q96F81 1524 aa17.62■□□□□ 0.41
SSBP1-210ENST00000481508 MAPK8IP2Q13387 824 aaPredicted RBP17.61■□□□□ 0.41
SSBP1-210ENST00000481508 DMRT2Q9Y5R5 561 aa17.6■□□□□ 0.41
SSBP1-210ENST00000481508 KIAA0556O60303 1618 aa17.59■□□□□ 0.41
SSBP1-210ENST00000481508 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
SSBP1-210ENST00000481508 GOLGA3Q08378 1498 aa17.52■□□□□ 0.4
SSBP1-210ENST00000481508 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.4
SSBP1-210ENST00000481508 SAMD9Q5K651 1589 aa17.5■□□□□ 0.39
SSBP1-210ENST00000481508 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
SSBP1-210ENST00000481508 TTBK1Q5TCY1 1321 aaPredicted RBP17.48■□□□□ 0.39
SSBP1-210ENST00000481508 PTPRGP23470 1445 aa17.47■□□□□ 0.39
SSBP1-210ENST00000481508 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
SSBP1-210ENST00000481508 RANGAP1P46060 587 aaPredicted RBP17.43■□□□□ 0.38
SSBP1-210ENST00000481508 UBTFP17480 764 aaKnown RBP17.41■□□□□ 0.38
SSBP1-210ENST00000481508 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
SSBP1-210ENST00000481508 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
SSBP1-210ENST00000481508 COL17A1Q9UMD9 1497 aaPredicted RBP17.39■□□□□ 0.37
SSBP1-210ENST00000481508 ABCA8O94911 1581 aa17.39■□□□□ 0.37
SSBP1-210ENST00000481508 UACAQ9BZF9 1416 aa17.38■□□□□ 0.37
SSBP1-210ENST00000481508 ABCC2Q92887 1545 aa17.38■□□□□ 0.37
SSBP1-210ENST00000481508 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
SSBP1-210ENST00000481508 FBXO41Q8TF61 875 aa17.37■□□□□ 0.37
SSBP1-210ENST00000481508 UHRF1BP1LA0JNW5 1464 aa17.37■□□□□ 0.37
SSBP1-210ENST00000481508 EFCAB5A4FU69 1503 aa17.37■□□□□ 0.37
SSBP1-210ENST00000481508 MAP3K4Q9Y6R4 1608 aa17.36■□□□□ 0.37
SSBP1-210ENST00000481508 GLI2P10070 1586 aa17.34■□□□□ 0.37
SSBP1-210ENST00000481508 ZCCHC11Q5TAX3 1644 aaKnown RBP17.34■□□□□ 0.37
SSBP1-210ENST00000481508 ARHGAP35Q9NRY4 1499 aa17.34■□□□□ 0.37
SSBP1-210ENST00000481508 RAPGEF6Q8TEU7 1601 aa17.31■□□□□ 0.36
SSBP1-210ENST00000481508 PPP4R3CPQ6ZMV5 832 aa17.3■□□□□ 0.36
SSBP1-210ENST00000481508 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
SSBP1-210ENST00000481508 ASXL2Q76L83 1435 aa17.29■□□□□ 0.36
SSBP1-210ENST00000481508 LMTK3Q96Q04 1460 aa17.28■□□□□ 0.36
SSBP1-210ENST00000481508 LOC105371045A0A1W2PR82 267 aa17.26■□□□□ 0.35
SSBP1-210ENST00000481508 NUP153P49790 1475 aaKnown RBP17.23■□□□□ 0.35
SSBP1-210ENST00000481508 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
SSBP1-210ENST00000481508 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
SSBP1-210ENST00000481508 CLIP1P30622 1438 aa17.21■□□□□ 0.34
SSBP1-210ENST00000481508 ATP10BO94823 1461 aa17.2■□□□□ 0.34
SSBP1-210ENST00000481508 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
SSBP1-210ENST00000481508 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
SSBP1-210ENST00000481508 CEP162Q5TB80 1403 aa17.17■□□□□ 0.34
SSBP1-210ENST00000481508 TEX14Q8IWB6 1497 aa17.16■□□□□ 0.34
SSBP1-210ENST00000481508 FMN1Q68DA7 1419 aa17.15■□□□□ 0.34
SSBP1-210ENST00000481508 WDR7Q9Y4E6 1490 aa17.15■□□□□ 0.34
SSBP1-210ENST00000481508 CDK13Q14004 1512 aaKnown RBP17.15■□□□□ 0.34
SSBP1-210ENST00000481508 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
SSBP1-210ENST00000481508 ILDR2Q71H61 639 aa17.12■□□□□ 0.33
SSBP1-210ENST00000481508 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
SSBP1-210ENST00000481508 CFAP43Q8NDM7 1665 aa17.07■□□□□ 0.32
SSBP1-210ENST00000481508 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
SSBP1-210ENST00000481508 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
SSBP1-210ENST00000481508 PTPRMP28827 1452 aa17.05■□□□□ 0.32
SSBP1-210ENST00000481508 FYCO1Q9BQS8 1478 aa17.05■□□□□ 0.32
SSBP1-210ENST00000481508 MADDQ8WXG6 1647 aa17.04■□□□□ 0.32
SSBP1-210ENST00000481508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
SSBP1-210ENST00000481508 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
SSBP1-210ENST00000481508 KCNH8Q96L42 1107 aa17.04■□□□□ 0.32
SSBP1-210ENST00000481508 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
SSBP1-210ENST00000481508 MAGI3Q5TCQ9 1506 aa17.01■□□□□ 0.31
SSBP1-210ENST00000481508 SOCS7O14512 581 aa17.01■□□□□ 0.31
SSBP1-210ENST00000481508 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms