RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
HDAC1-207ENST00000481281 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
HDAC1-207ENST00000481281 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
HDAC1-207ENST00000481281 RAPGEF2Q9Y4G8 1499 aa22.17■■□□□ 1.14
HDAC1-207ENST00000481281 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
HDAC1-207ENST00000481281 PRXQ9BXM0 1461 aa22.09■■□□□ 1.13
HDAC1-207ENST00000481281 CTTNBP2Q8WZ74 1663 aa22.04■■□□□ 1.12
HDAC1-207ENST00000481281 UGGT2Q9NYU1 1516 aa22.01■■□□□ 1.11
HDAC1-207ENST00000481281 EEA1Q15075 1411 aa22■■□□□ 1.11
HDAC1-207ENST00000481281 CARMIL2Q6F5E8 1435 aa21.98■■□□□ 1.11
HDAC1-207ENST00000481281 DISP1Q96F81 1524 aa21.97■■□□□ 1.11
HDAC1-207ENST00000481281 TRHP20396 242 aaPredicted RBP21.96■■□□□ 1.11
HDAC1-207ENST00000481281 ADCY10Q96PN6 1610 aa21.95■■□□□ 1.1
HDAC1-207ENST00000481281 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
HDAC1-207ENST00000481281 CHIC1Q5VXU3 224 aa21.93■■□□□ 1.1
HDAC1-207ENST00000481281 TNIKQ9UKE5 1360 aa21.93■■□□□ 1.1
HDAC1-207ENST00000481281 KIAA0556O60303 1618 aa21.92■■□□□ 1.1
HDAC1-207ENST00000481281 PTPRGP23470 1445 aa21.91■■□□□ 1.1
HDAC1-207ENST00000481281 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
HDAC1-207ENST00000481281 GOLGA3Q08378 1498 aa21.83■■□□□ 1.09
HDAC1-207ENST00000481281 KIF21BO75037 1637 aa21.83■■□□□ 1.08
HDAC1-207ENST00000481281 KIF13AQ9H1H9 1805 aa21.82■■□□□ 1.08
HDAC1-207ENST00000481281 UHRF1BP1LA0JNW5 1464 aa21.81■■□□□ 1.08
HDAC1-207ENST00000481281 NPM1P06748 294 aaKnown RBP eCLIP21.79■■□□□ 1.08
HDAC1-207ENST00000481281 ABCC2Q92887 1545 aa21.79■■□□□ 1.08
HDAC1-207ENST00000481281 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
HDAC1-207ENST00000481281 FAM9AQ8IZU1 332 aaPredicted RBP21.78■■□□□ 1.08
HDAC1-207ENST00000481281 TTBK1Q5TCY1 1321 aaPredicted RBP21.78■■□□□ 1.08
HDAC1-207ENST00000481281 ABCC10Q5T3U5 1492 aa21.75■■□□□ 1.07
HDAC1-207ENST00000481281 SAMD9Q5K651 1589 aa21.74■■□□□ 1.07
HDAC1-207ENST00000481281 DIP2BQ9P265 1576 aa21.74■■□□□ 1.07
HDAC1-207ENST00000481281 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
HDAC1-207ENST00000481281 ABCA8O94911 1581 aa21.7■■□□□ 1.06
HDAC1-207ENST00000481281 PLB1Q6P1J6 1458 aa21.69■■□□□ 1.06
HDAC1-207ENST00000481281 ZCCHC11Q5TAX3 1644 aaKnown RBP21.67■■□□□ 1.06
HDAC1-207ENST00000481281 ASXL2Q76L83 1435 aa21.64■■□□□ 1.06
HDAC1-207ENST00000481281 FAM69CQ0P6D2 419 aa21.63■■□□□ 1.05
HDAC1-207ENST00000481281 EFCAB5A4FU69 1503 aa21.6■■□□□ 1.05
HDAC1-207ENST00000481281 GLI2P10070 1586 aa21.58■■□□□ 1.05
HDAC1-207ENST00000481281 P3H3Q8IVL6 736 aa21.58■■□□□ 1.05
HDAC1-207ENST00000481281 RAPGEF6Q8TEU7 1601 aa21.54■■□□□ 1.04
HDAC1-207ENST00000481281 EPRSP07814 1512 aaKnown RBP21.54■■□□□ 1.04
HDAC1-207ENST00000481281 FHOD3Q2V2M9 1422 aa21.54■■□□□ 1.04
HDAC1-207ENST00000481281 WDR7Q9Y4E6 1490 aa21.52■■□□□ 1.04
HDAC1-207ENST00000481281 TSPOAP1O95153 1857 aa21.52■■□□□ 1.03
HDAC1-207ENST00000481281 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
HDAC1-207ENST00000481281 RANGAP1P46060 587 aaPredicted RBP21.5■■□□□ 1.03
HDAC1-207ENST00000481281 MAP3K4Q9Y6R4 1608 aa21.49■■□□□ 1.03
HDAC1-207ENST00000481281 PPRC1Q5VV67 1664 aaKnown RBP21.49■■□□□ 1.03
HDAC1-207ENST00000481281 EHMT2Q96KQ7 1210 aa21.48■■□□□ 1.03
HDAC1-207ENST00000481281 ATP10BO94823 1461 aa21.47■■□□□ 1.03
HDAC1-207ENST00000481281 NUP153P49790 1475 aaKnown RBP21.45■■□□□ 1.03
HDAC1-207ENST00000481281 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
HDAC1-207ENST00000481281 KDM6BO15054 1643 aa21.41■■□□□ 1.02
HDAC1-207ENST00000481281 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
HDAC1-207ENST00000481281 ARID3CA6NKF2 412 aa21.38■■□□□ 1.01
HDAC1-207ENST00000481281 TEX14Q8IWB6 1497 aa21.36■■□□□ 1.01
HDAC1-207ENST00000481281 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
HDAC1-207ENST00000481281 MAGI3Q5TCQ9 1506 aa21.33■■□□□ 1
HDAC1-207ENST00000481281 ABCA9Q8IUA7 1624 aa21.33■■□□□ 1
HDAC1-207ENST00000481281 KCNH8Q96L42 1107 aa21.32■■□□□ 1
HDAC1-207ENST00000481281 HECW1Q76N89 1606 aa21.31■■□□□ 1
HDAC1-207ENST00000481281 CD109Q6YHK3 1445 aa21.3■■□□□ 1
HDAC1-207ENST00000481281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
HDAC1-207ENST00000481281 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
HDAC1-207ENST00000481281 CDK13Q14004 1512 aaKnown RBP21.27■■□□□ 1
HDAC1-207ENST00000481281 COL17A1Q9UMD9 1497 aaPredicted RBP21.26■□□□□ 0.99
HDAC1-207ENST00000481281 CLIP1P30622 1438 aa21.22■□□□□ 0.99
HDAC1-207ENST00000481281 LRRIQ1Q96JM4 1722 aa21.22■□□□□ 0.99
HDAC1-207ENST00000481281 PLEKHD1A6NEE1 506 aa21.21■□□□□ 0.99
HDAC1-207ENST00000481281 PCF11O94913 1555 aaKnown RBP21.21■□□□□ 0.99
HDAC1-207ENST00000481281 CASKIN1Q8WXD9 1431 aa21.18■□□□□ 0.98
HDAC1-207ENST00000481281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.17■□□□□ 0.98
HDAC1-207ENST00000481281 TTC37Q6PGP7 1564 aa21.15■□□□□ 0.98
HDAC1-207ENST00000481281 ARAP3Q8WWN8 1544 aa21.15■□□□□ 0.98
HDAC1-207ENST00000481281 FYCO1Q9BQS8 1478 aa21.14■□□□□ 0.98
HDAC1-207ENST00000481281 NEO1Q92859 1461 aa21.13■□□□□ 0.97
HDAC1-207ENST00000481281 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
HDAC1-207ENST00000481281 CCDC18Q5T9S5 1454 aa21.13■□□□□ 0.97
HDAC1-207ENST00000481281 PHLDB1Q86UU1 1377 aa21.12■□□□□ 0.97
HDAC1-207ENST00000481281 CEP162Q5TB80 1403 aa21.1■□□□□ 0.97
HDAC1-207ENST00000481281 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
HDAC1-207ENST00000481281 TROQ12816 1431 aaPredicted RBP21.09■□□□□ 0.97
HDAC1-207ENST00000481281 KIF14Q15058 1648 aa21.08■□□□□ 0.97
HDAC1-207ENST00000481281 CFAP74Q9C0B2 1584 aa21.08■□□□□ 0.97
HDAC1-207ENST00000481281 MYO5CQ9NQX4 1742 aa21.05■□□□□ 0.96
HDAC1-207ENST00000481281 FANCAO15360 1455 aa21.05■□□□□ 0.96
HDAC1-207ENST00000481281 FRMPD1Q5SYB0 1578 aa21.03■□□□□ 0.96
HDAC1-207ENST00000481281 PLCH2O75038 1416 aa21.02■□□□□ 0.96
HDAC1-207ENST00000481281 AKNAQ7Z591 1439 aa21■□□□□ 0.95
HDAC1-207ENST00000481281 RICTORQ6R327 1708 aa20.99■□□□□ 0.95
HDAC1-207ENST00000481281 LOC105371045A0A1W2PR82 267 aa20.99■□□□□ 0.95
HDAC1-207ENST00000481281 DENND4BO75064 1496 aaPredicted RBP20.95■□□□□ 0.94
HDAC1-207ENST00000481281 RAPGEF3O95398 923 aa20.95■□□□□ 0.94
HDAC1-207ENST00000481281 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
HDAC1-207ENST00000481281 PREX2Q70Z35 1606 aa20.94■□□□□ 0.94
HDAC1-207ENST00000481281 KDM4FA0A1W2PPD8 638 aa20.94■□□□□ 0.94
HDAC1-207ENST00000481281 CDC42BPBQ9Y5S2 1711 aa20.93■□□□□ 0.94
HDAC1-207ENST00000481281 ADGRL1O94910 1474 aa20.93■□□□□ 0.94
HDAC1-207ENST00000481281 ZMYM4Q5VZL5 1548 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 720 ms