RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 JPH4Q96JJ6 628 aa19.47■□□□□ 0.71
RAPGEF1-207ENST00000481260 PRG4Q92954 1404 aaPredicted RBP19.46■□□□□ 0.71
RAPGEF1-207ENST00000481260 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
RAPGEF1-207ENST00000481260 RAPGEF2Q9Y4G8 1499 aa19.36■□□□□ 0.69
RAPGEF1-207ENST00000481260 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
RAPGEF1-207ENST00000481260 PRXQ9BXM0 1461 aa19.31■□□□□ 0.68
RAPGEF1-207ENST00000481260 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
RAPGEF1-207ENST00000481260 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
RAPGEF1-207ENST00000481260 TTBK1Q5TCY1 1321 aaPredicted RBP19.28■□□□□ 0.68
RAPGEF1-207ENST00000481260 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
RAPGEF1-207ENST00000481260 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
RAPGEF1-207ENST00000481260 DISP1Q96F81 1524 aa19.24■□□□□ 0.67
RAPGEF1-207ENST00000481260 ADCY10Q96PN6 1610 aa19.2■□□□□ 0.66
RAPGEF1-207ENST00000481260 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
RAPGEF1-207ENST00000481260 PTPRGP23470 1445 aa19.17■□□□□ 0.66
RAPGEF1-207ENST00000481260 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
RAPGEF1-207ENST00000481260 CARMIL2Q6F5E8 1435 aa19.15■□□□□ 0.66
RAPGEF1-207ENST00000481260 CTTNBP2Q8WZ74 1663 aa19.14■□□□□ 0.66
RAPGEF1-207ENST00000481260 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
RAPGEF1-207ENST00000481260 KIAA0556O60303 1618 aa19.13■□□□□ 0.65
RAPGEF1-207ENST00000481260 EEA1Q15075 1411 aa19.11■□□□□ 0.65
RAPGEF1-207ENST00000481260 P3H3Q8IVL6 736 aa19.07■□□□□ 0.64
RAPGEF1-207ENST00000481260 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
RAPGEF1-207ENST00000481260 UACAQ9BZF9 1416 aa19.04■□□□□ 0.64
RAPGEF1-207ENST00000481260 PLB1Q6P1J6 1458 aa19.03■□□□□ 0.64
RAPGEF1-207ENST00000481260 NPM1P06748 294 aaKnown RBP eCLIP19.02■□□□□ 0.64
RAPGEF1-207ENST00000481260 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
RAPGEF1-207ENST00000481260 ABCC2Q92887 1545 aa19.01■□□□□ 0.63
RAPGEF1-207ENST00000481260 KIF21BO75037 1637 aa19.01■□□□□ 0.63
RAPGEF1-207ENST00000481260 KIF13AQ9H1H9 1805 aa19.01■□□□□ 0.63
RAPGEF1-207ENST00000481260 UHRF1BP1LA0JNW5 1464 aa19■□□□□ 0.63
RAPGEF1-207ENST00000481260 GOLGA3Q08378 1498 aa18.98■□□□□ 0.63
RAPGEF1-207ENST00000481260 ABCC10Q5T3U5 1492 aa18.98■□□□□ 0.63
RAPGEF1-207ENST00000481260 FAM69CQ0P6D2 419 aa18.98■□□□□ 0.63
RAPGEF1-207ENST00000481260 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
RAPGEF1-207ENST00000481260 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
RAPGEF1-207ENST00000481260 ABCA8O94911 1581 aa18.94■□□□□ 0.62
RAPGEF1-207ENST00000481260 ASXL2Q76L83 1435 aa18.94■□□□□ 0.62
RAPGEF1-207ENST00000481260 ARID3CA6NKF2 412 aa18.94■□□□□ 0.62
RAPGEF1-207ENST00000481260 KDM5BQ9UGL1 1544 aa18.94■□□□□ 0.62
RAPGEF1-207ENST00000481260 FHOD3Q2V2M9 1422 aa18.92■□□□□ 0.62
RAPGEF1-207ENST00000481260 ZCCHC11Q5TAX3 1644 aaKnown RBP18.92■□□□□ 0.62
RAPGEF1-207ENST00000481260 UBTFP17480 764 aaKnown RBP18.9■□□□□ 0.62
RAPGEF1-207ENST00000481260 EPRSP07814 1512 aaKnown RBP18.83■□□□□ 0.6
RAPGEF1-207ENST00000481260 ATP10BO94823 1461 aa18.82■□□□□ 0.6
RAPGEF1-207ENST00000481260 TSPOAP1O95153 1857 aa18.82■□□□□ 0.6
RAPGEF1-207ENST00000481260 ARHGAP35Q9NRY4 1499 aa18.79■□□□□ 0.6
RAPGEF1-207ENST00000481260 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
RAPGEF1-207ENST00000481260 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
RAPGEF1-207ENST00000481260 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
RAPGEF1-207ENST00000481260 GLI2P10070 1586 aa18.78■□□□□ 0.6
RAPGEF1-207ENST00000481260 PPRC1Q5VV67 1664 aaKnown RBP18.77■□□□□ 0.6
RAPGEF1-207ENST00000481260 KCNH8Q96L42 1107 aa18.77■□□□□ 0.6
RAPGEF1-207ENST00000481260 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
RAPGEF1-207ENST00000481260 MAP3K4Q9Y6R4 1608 aa18.72■□□□□ 0.59
RAPGEF1-207ENST00000481260 AEBP2Q6ZN18 517 aaPredicted RBP18.7■□□□□ 0.58
RAPGEF1-207ENST00000481260 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF1-207ENST00000481260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
RAPGEF1-207ENST00000481260 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
RAPGEF1-207ENST00000481260 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
RAPGEF1-207ENST00000481260 KDM6BO15054 1643 aa18.66■□□□□ 0.58
RAPGEF1-207ENST00000481260 CD109Q6YHK3 1445 aa18.64■□□□□ 0.57
RAPGEF1-207ENST00000481260 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
RAPGEF1-207ENST00000481260 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
RAPGEF1-207ENST00000481260 FMN1Q68DA7 1419 aa18.59■□□□□ 0.57
RAPGEF1-207ENST00000481260 CLIP1P30622 1438 aa18.58■□□□□ 0.57
RAPGEF1-207ENST00000481260 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.57
RAPGEF1-207ENST00000481260 MAGI3Q5TCQ9 1506 aa18.58■□□□□ 0.56
RAPGEF1-207ENST00000481260 LRRIQ1Q96JM4 1722 aa18.57■□□□□ 0.56
RAPGEF1-207ENST00000481260 ABCA9Q8IUA7 1624 aa18.56■□□□□ 0.56
RAPGEF1-207ENST00000481260 PCF11O94913 1555 aaKnown RBP18.56■□□□□ 0.56
RAPGEF1-207ENST00000481260 TEX14Q8IWB6 1497 aa18.56■□□□□ 0.56
RAPGEF1-207ENST00000481260 HECW1Q76N89 1606 aa18.54■□□□□ 0.56
RAPGEF1-207ENST00000481260 PLEKHD1A6NEE1 506 aa18.54■□□□□ 0.56
RAPGEF1-207ENST00000481260 TTC37Q6PGP7 1564 aa18.51■□□□□ 0.55
RAPGEF1-207ENST00000481260 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAPGEF1-207ENST00000481260 CASKIN1Q8WXD9 1431 aa18.5■□□□□ 0.55
RAPGEF1-207ENST00000481260 CEP162Q5TB80 1403 aa18.49■□□□□ 0.55
RAPGEF1-207ENST00000481260 KIF14Q15058 1648 aa18.48■□□□□ 0.55
RAPGEF1-207ENST00000481260 RAPGEF3O95398 923 aa18.44■□□□□ 0.54
RAPGEF1-207ENST00000481260 KDM4FA0A1W2PPD8 638 aa18.43■□□□□ 0.54
RAPGEF1-207ENST00000481260 TROQ12816 1431 aaPredicted RBP18.42■□□□□ 0.54
RAPGEF1-207ENST00000481260 FYCO1Q9BQS8 1478 aa18.42■□□□□ 0.54
RAPGEF1-207ENST00000481260 ARAP3Q8WWN8 1544 aa18.42■□□□□ 0.54
RAPGEF1-207ENST00000481260 FRMPD1Q5SYB0 1578 aa18.4■□□□□ 0.54
RAPGEF1-207ENST00000481260 NEO1Q92859 1461 aa18.39■□□□□ 0.54
RAPGEF1-207ENST00000481260 FANCAO15360 1455 aa18.39■□□□□ 0.53
RAPGEF1-207ENST00000481260 CCDC18Q5T9S5 1454 aa18.38■□□□□ 0.53
RAPGEF1-207ENST00000481260 CDK11AQ9UQ88 783 aaPredicted RBP18.37■□□□□ 0.53
RAPGEF1-207ENST00000481260 PLCH2O75038 1416 aa18.37■□□□□ 0.53
RAPGEF1-207ENST00000481260 AKNAQ7Z591 1439 aa18.37■□□□□ 0.53
RAPGEF1-207ENST00000481260 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
RAPGEF1-207ENST00000481260 ADGRL1O94910 1474 aa18.31■□□□□ 0.52
RAPGEF1-207ENST00000481260 DENND4BO75064 1496 aaPredicted RBP18.3■□□□□ 0.52
RAPGEF1-207ENST00000481260 MYO5CQ9NQX4 1742 aa18.29■□□□□ 0.52
RAPGEF1-207ENST00000481260 RICTORQ6R327 1708 aa18.29■□□□□ 0.52
RAPGEF1-207ENST00000481260 SCAPERQ9BY12 1400 aa18.28■□□□□ 0.52
RAPGEF1-207ENST00000481260 ARHGAP5Q13017 1502 aa18.28■□□□□ 0.52
RAPGEF1-207ENST00000481260 CDC42BPBQ9Y5S2 1711 aa18.26■□□□□ 0.51
RAPGEF1-207ENST00000481260 CFAP74Q9C0B2 1584 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms