RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
PRDM1-206ENST00000481163 CUL7Q14999 1698 aa11.27□□□□□ -0.61
PRDM1-206ENST00000481163 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
PRDM1-206ENST00000481163 CARMIL1Q5VZK9 1371 aa11.26□□□□□ -0.61
PRDM1-206ENST00000481163 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
PRDM1-206ENST00000481163 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
PRDM1-206ENST00000481163 NUP160Q12769 1436 aa11.23□□□□□ -0.61
PRDM1-206ENST00000481163 ERCC6L2Q5T890 1561 aa11.23□□□□□ -0.61
PRDM1-206ENST00000481163 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
PRDM1-206ENST00000481163 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
PRDM1-206ENST00000481163 PRG4Q92954 1404 aaPredicted RBP11.18□□□□□ -0.62
PRDM1-206ENST00000481163 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
PRDM1-206ENST00000481163 TRHP20396 242 aaPredicted RBP11.17□□□□□ -0.62
PRDM1-206ENST00000481163 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
PRDM1-206ENST00000481163 CSRNP3Q8WYN3 585 aa11.15□□□□□ -0.62
PRDM1-206ENST00000481163 KIAA0586Q9BVV6 1533 aa11.14□□□□□ -0.63
PRDM1-206ENST00000481163 RANGAP1P46060 587 aaPredicted RBP11.13□□□□□ -0.63
PRDM1-206ENST00000481163 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
PRDM1-206ENST00000481163 IQGAP2Q13576 1575 aa11.11□□□□□ -0.63
PRDM1-206ENST00000481163 PRXQ9BXM0 1461 aa11.07□□□□□ -0.64
PRDM1-206ENST00000481163 P3H3Q8IVL6 736 aa11.07□□□□□ -0.64
PRDM1-206ENST00000481163 CARMIL2Q6F5E8 1435 aa11.07□□□□□ -0.64
PRDM1-206ENST00000481163 NPM1P06748 294 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRDM1-206ENST00000481163 EEA1Q15075 1411 aa11.06□□□□□ -0.64
PRDM1-206ENST00000481163 PTPRGP23470 1445 aa11.04□□□□□ -0.64
PRDM1-206ENST00000481163 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
PRDM1-206ENST00000481163 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
PRDM1-206ENST00000481163 DISP1Q96F81 1524 aa11.01□□□□□ -0.65
PRDM1-206ENST00000481163 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
PRDM1-206ENST00000481163 KIAA0556O60303 1618 aa11.01□□□□□ -0.65
PRDM1-206ENST00000481163 ADCY10Q96PN6 1610 aa11.01□□□□□ -0.65
PRDM1-206ENST00000481163 KIF21BO75037 1637 aa10.98□□□□□ -0.65
PRDM1-206ENST00000481163 ARID3CA6NKF2 412 aa10.97□□□□□ -0.65
PRDM1-206ENST00000481163 GOLGA3Q08378 1498 aa10.97□□□□□ -0.65
PRDM1-206ENST00000481163 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
PRDM1-206ENST00000481163 KIF13AQ9H1H9 1805 aa10.95□□□□□ -0.66
PRDM1-206ENST00000481163 UACAQ9BZF9 1416 aa10.94□□□□□ -0.66
PRDM1-206ENST00000481163 FAM69CQ0P6D2 419 aa10.94□□□□□ -0.66
PRDM1-206ENST00000481163 PLB1Q6P1J6 1458 aa10.93□□□□□ -0.66
PRDM1-206ENST00000481163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
PRDM1-206ENST00000481163 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
PRDM1-206ENST00000481163 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
PRDM1-206ENST00000481163 ABCC2Q92887 1545 aa10.91□□□□□ -0.66
PRDM1-206ENST00000481163 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
PRDM1-206ENST00000481163 FHOD3Q2V2M9 1422 aa10.9□□□□□ -0.66
PRDM1-206ENST00000481163 SAMD9Q5K651 1589 aa10.9□□□□□ -0.67
PRDM1-206ENST00000481163 KCNH8Q96L42 1107 aa10.89□□□□□ -0.67
PRDM1-206ENST00000481163 UHRF1BP1LA0JNW5 1464 aa10.88□□□□□ -0.67
PRDM1-206ENST00000481163 ASXL2Q76L83 1435 aa10.88□□□□□ -0.67
PRDM1-206ENST00000481163 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
PRDM1-206ENST00000481163 ABCA8O94911 1581 aa10.86□□□□□ -0.67
PRDM1-206ENST00000481163 DIP2BQ9P265 1576 aa10.86□□□□□ -0.67
PRDM1-206ENST00000481163 ABCC10Q5T3U5 1492 aa10.86□□□□□ -0.67
PRDM1-206ENST00000481163 RAPGEF6Q8TEU7 1601 aa10.85□□□□□ -0.67
PRDM1-206ENST00000481163 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
PRDM1-206ENST00000481163 LOC105371045A0A1W2PR82 267 aa10.84□□□□□ -0.67
PRDM1-206ENST00000481163 EFCAB5A4FU69 1503 aa10.83□□□□□ -0.68
PRDM1-206ENST00000481163 ARHGAP35Q9NRY4 1499 aa10.81□□□□□ -0.68
PRDM1-206ENST00000481163 ATP10BO94823 1461 aa10.81□□□□□ -0.68
PRDM1-206ENST00000481163 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
PRDM1-206ENST00000481163 WDR7Q9Y4E6 1490 aa10.79□□□□□ -0.68
PRDM1-206ENST00000481163 NUP153P49790 1475 aaKnown RBP10.77□□□□□ -0.69
PRDM1-206ENST00000481163 PLEKHD1A6NEE1 506 aa10.77□□□□□ -0.69
PRDM1-206ENST00000481163 CLIP1P30622 1438 aa10.76□□□□□ -0.69
PRDM1-206ENST00000481163 CDK13Q14004 1512 aaKnown RBP10.76□□□□□ -0.69
PRDM1-206ENST00000481163 PPRC1Q5VV67 1664 aaKnown RBP10.76□□□□□ -0.69
PRDM1-206ENST00000481163 FMN1Q68DA7 1419 aa10.75□□□□□ -0.69
PRDM1-206ENST00000481163 GLI2P10070 1586 aa10.75□□□□□ -0.69
PRDM1-206ENST00000481163 MAP3K4Q9Y6R4 1608 aa10.75□□□□□ -0.69
PRDM1-206ENST00000481163 KDM6BO15054 1643 aa10.74□□□□□ -0.69
PRDM1-206ENST00000481163 LRRIQ1Q96JM4 1722 aa10.74□□□□□ -0.69
PRDM1-206ENST00000481163 HECW1Q76N89 1606 aa10.73□□□□□ -0.69
PRDM1-206ENST00000481163 CFAP43Q8NDM7 1665 aa10.73□□□□□ -0.69
PRDM1-206ENST00000481163 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
PRDM1-206ENST00000481163 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
PRDM1-206ENST00000481163 CEP162Q5TB80 1403 aa10.7□□□□□ -0.7
PRDM1-206ENST00000481163 CDK11AQ9UQ88 783 aaPredicted RBP10.7□□□□□ -0.7
PRDM1-206ENST00000481163 TEX14Q8IWB6 1497 aa10.68□□□□□ -0.7
PRDM1-206ENST00000481163 ABCA9Q8IUA7 1624 aa10.67□□□□□ -0.7
PRDM1-206ENST00000481163 CASKIN1Q8WXD9 1431 aa10.66□□□□□ -0.7
PRDM1-206ENST00000481163 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-206ENST00000481163 COL17A1Q9UMD9 1497 aaPredicted RBP10.65□□□□□ -0.7
PRDM1-206ENST00000481163 TTC37Q6PGP7 1564 aa10.65□□□□□ -0.71
PRDM1-206ENST00000481163 MAGI3Q5TCQ9 1506 aa10.64□□□□□ -0.71
PRDM1-206ENST00000481163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.64□□□□□ -0.71
PRDM1-206ENST00000481163 KIF14Q15058 1648 aa10.64□□□□□ -0.71
PRDM1-206ENST00000481163 FYCO1Q9BQS8 1478 aa10.62□□□□□ -0.71
PRDM1-206ENST00000481163 MYO5CQ9NQX4 1742 aa10.62□□□□□ -0.71
PRDM1-206ENST00000481163 RAPGEF3O95398 923 aa10.62□□□□□ -0.71
PRDM1-206ENST00000481163 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
PRDM1-206ENST00000481163 TROQ12816 1431 aaPredicted RBP10.6□□□□□ -0.71
PRDM1-206ENST00000481163 MYT1LQ9UL68 1186 aa10.59□□□□□ -0.71
PRDM1-206ENST00000481163 ZNF777Q9ULD5 760 aaPredicted RBP10.59□□□□□ -0.71
PRDM1-206ENST00000481163 FANCAO15360 1455 aa10.59□□□□□ -0.71
PRDM1-206ENST00000481163 MTUS2Q5JR59 1369 aa10.58□□□□□ -0.72
PRDM1-206ENST00000481163 CDC42BPBQ9Y5S2 1711 aa10.58□□□□□ -0.72
PRDM1-206ENST00000481163 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
PRDM1-206ENST00000481163 AKNAQ7Z591 1439 aa10.58□□□□□ -0.72
PRDM1-206ENST00000481163 EFCAB2Q5VUJ9 269 aa10.57□□□□□ -0.72
PRDM1-206ENST00000481163 PLCH2O75038 1416 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms