RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
PKP4-211ENST00000481115 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
PKP4-211ENST00000481115 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.65
PKP4-211ENST00000481115 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
PKP4-211ENST00000481115 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
PKP4-211ENST00000481115 HOMEZQ8IX15 550 aa10.97□□□□□ -0.65
PKP4-211ENST00000481115 PEG3Q9GZU2 1588 aa10.96□□□□□ -0.65
PKP4-211ENST00000481115 APLP2Q06481 763 aa10.95□□□□□ -0.66
PKP4-211ENST00000481115 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
PKP4-211ENST00000481115 DCAF8L1A6NGE4 600 aa10.94□□□□□ -0.66
PKP4-211ENST00000481115 RGL2O15211 777 aa10.93□□□□□ -0.66
PKP4-211ENST00000481115 CLSPNQ9HAW4 1339 aa10.92□□□□□ -0.66
PKP4-211ENST00000481115 SMARCA2P51531 1590 aa10.92□□□□□ -0.66
PKP4-211ENST00000481115 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
PKP4-211ENST00000481115 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
PKP4-211ENST00000481115 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
PKP4-211ENST00000481115 NCAPD3P42695 1498 aa10.9□□□□□ -0.66
PKP4-211ENST00000481115 RNF39Q9H2S5 420 aa10.9□□□□□ -0.66
PKP4-211ENST00000481115 WIZO95785 1651 aa10.89□□□□□ -0.67
PKP4-211ENST00000481115 HMGXB3Q12766 1538 aa10.88□□□□□ -0.67
PKP4-211ENST00000481115 CHGAP10645 457 aaKnown RBP10.84□□□□□ -0.67
PKP4-211ENST00000481115 BCL11AQ9H165 835 aa10.83□□□□□ -0.68
PKP4-211ENST00000481115 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
PKP4-211ENST00000481115 NEUROD1Q13562 356 aa10.82□□□□□ -0.68
PKP4-211ENST00000481115 POTEHQ6S545 545 aa10.82□□□□□ -0.68
PKP4-211ENST00000481115 C14orf37Q86TY3 774 aa10.82□□□□□ -0.68
PKP4-211ENST00000481115 TOP2AP11388 1531 aaKnown RBP10.79□□□□□ -0.68
PKP4-211ENST00000481115 STAG3Q9UJ98 1225 aa10.74□□□□□ -0.69
PKP4-211ENST00000481115 ANP32EQ9BTT0 268 aa10.73□□□□□ -0.69
PKP4-211ENST00000481115 HS6ST3Q8IZP7 471 aa10.7□□□□□ -0.7
PKP4-211ENST00000481115 PLCD3Q8N3E9 789 aa10.7□□□□□ -0.7
PKP4-211ENST00000481115 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
PKP4-211ENST00000481115 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
PKP4-211ENST00000481115 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
PKP4-211ENST00000481115 POLA2Q14181 598 aa10.64□□□□□ -0.71
PKP4-211ENST00000481115 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
PKP4-211ENST00000481115 TRIM41Q8WV44 630 aa10.63□□□□□ -0.71
PKP4-211ENST00000481115 DIEXFQ68CQ4 756 aaKnown RBP10.61□□□□□ -0.71
PKP4-211ENST00000481115 FAM9AQ8IZU1 332 aaPredicted RBP10.61□□□□□ -0.71
PKP4-211ENST00000481115 MIER1Q8N108 512 aa10.6□□□□□ -0.71
PKP4-211ENST00000481115 MYT1LQ9UL68 1186 aa10.6□□□□□ -0.71
PKP4-211ENST00000481115 LAMC3Q9Y6N6 1575 aa10.59□□□□□ -0.71
PKP4-211ENST00000481115 CFTRP13569 1480 aa10.56□□□□□ -0.72
PKP4-211ENST00000481115 PRDM2Q13029 1718 aa10.56□□□□□ -0.72
PKP4-211ENST00000481115 CADPSQ9ULU8 1353 aa10.56□□□□□ -0.72
PKP4-211ENST00000481115 NESP48681 1621 aa10.56□□□□□ -0.72
PKP4-211ENST00000481115 ZBTB12Q9Y330 459 aaPredicted RBP10.56□□□□□ -0.72
PKP4-211ENST00000481115 TRHP20396 242 aaPredicted RBP10.55□□□□□ -0.72
PKP4-211ENST00000481115 GTPBP6O43824 516 aaPredicted RBP10.53□□□□□ -0.72
PKP4-211ENST00000481115 ZBTB47Q9UFB7 747 aaPredicted RBP10.53□□□□□ -0.72
PKP4-211ENST00000481115 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
PKP4-211ENST00000481115 RANGAP1P46060 587 aaPredicted RBP10.51□□□□□ -0.73
PKP4-211ENST00000481115 PODXL2Q9NZ53 605 aa10.49□□□□□ -0.73
PKP4-211ENST00000481115 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
PKP4-211ENST00000481115 PLEKHG5O94827 1062 aa10.48□□□□□ -0.73
PKP4-211ENST00000481115 P3H3Q8IVL6 736 aa10.47□□□□□ -0.73
PKP4-211ENST00000481115 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
PKP4-211ENST00000481115 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
PKP4-211ENST00000481115 ZNF692Q9BU19 519 aaPredicted RBP10.46□□□□□ -0.73
PKP4-211ENST00000481115 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
PKP4-211ENST00000481115 FANCD2Q9BXW9 1451 aa10.44□□□□□ -0.74
PKP4-211ENST00000481115 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
PKP4-211ENST00000481115 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
PKP4-211ENST00000481115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.43□□□□□ -0.74
PKP4-211ENST00000481115 ERCC6Q03468 1493 aa10.42□□□□□ -0.74
PKP4-211ENST00000481115 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
PKP4-211ENST00000481115 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
PKP4-211ENST00000481115 CEP164Q9UPV0 1460 aa10.41□□□□□ -0.74
PKP4-211ENST00000481115 GSE1Q14687 1217 aa10.4□□□□□ -0.74
PKP4-211ENST00000481115 RIOK3O14730 519 aaKnown RBP10.39□□□□□ -0.75
PKP4-211ENST00000481115 LOC105371045A0A1W2PR82 267 aa10.38□□□□□ -0.75
PKP4-211ENST00000481115 RYDENQ9NUL5 291 aaKnown RBP10.38□□□□□ -0.75
PKP4-211ENST00000481115 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
PKP4-211ENST00000481115 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
PKP4-211ENST00000481115 ERICH6BQ5W0A0 696 aa10.37□□□□□ -0.75
PKP4-211ENST00000481115 CAPN15O75808 1086 aa10.36□□□□□ -0.75
PKP4-211ENST00000481115 WDR62O43379 1518 aa10.36□□□□□ -0.75
PKP4-211ENST00000481115 SPDYE2BA6NHP3 402 aa10.35□□□□□ -0.75
PKP4-211ENST00000481115 SPDYE6P0CI01 402 aa10.35□□□□□ -0.75
PKP4-211ENST00000481115 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
PKP4-211ENST00000481115 STK25O00506 426 aa10.34□□□□□ -0.75
PKP4-211ENST00000481115 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
PKP4-211ENST00000481115 URB2Q14146 1524 aaKnown RBP10.33□□□□□ -0.76
PKP4-211ENST00000481115 DNMBPQ6XZF7 1577 aa10.32□□□□□ -0.76
PKP4-211ENST00000481115 NEUROD2Q15784 382 aa10.32□□□□□ -0.76
PKP4-211ENST00000481115 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
PKP4-211ENST00000481115 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
PKP4-211ENST00000481115 SUPT16HQ9Y5B9 1047 aaKnown RBP10.31□□□□□ -0.76
PKP4-211ENST00000481115 TOPBP1Q92547 1522 aa10.31□□□□□ -0.76
PKP4-211ENST00000481115 CUX1P39880 1505 aa10.3□□□□□ -0.76
PKP4-211ENST00000481115 CUX2O14529 1486 aa10.3□□□□□ -0.76
PKP4-211ENST00000481115 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
PKP4-211ENST00000481115 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
PKP4-211ENST00000481115 WDR70Q9NW82 654 aa10.28□□□□□ -0.76
PKP4-211ENST00000481115 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
PKP4-211ENST00000481115 WRNQ14191 1432 aaPredicted RBP eCLIP10.27□□□□□ -0.77
PKP4-211ENST00000481115 UBTFP17480 764 aaKnown RBP10.27□□□□□ -0.77
PKP4-211ENST00000481115 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
PKP4-211ENST00000481115 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
PKP4-211ENST00000481115 SGIP1Q9BQI5 828 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms