RNA–Protein interactions for RNA: ENST00000480807.1

SNX8-208, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 534 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-208ENST00000480807 JPH4Q96JJ6 628 aa26.17■■□□□ 1.78
SNX8-208ENST00000480807 PRG4Q92954 1404 aaPredicted RBP26.16■■□□□ 1.78
SNX8-208ENST00000480807 RUSC2Q8N2Y8 1516 aa26.11■■□□□ 1.77
SNX8-208ENST00000480807 KIAA0586Q9BVV6 1533 aa26.05■■□□□ 1.76
SNX8-208ENST00000480807 RAPGEF2Q9Y4G8 1499 aa26.04■■□□□ 1.76
SNX8-208ENST00000480807 EEA1Q15075 1411 aa26.02■■□□□ 1.76
SNX8-208ENST00000480807 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
SNX8-208ENST00000480807 PRXQ9BXM0 1461 aa25.92■■□□□ 1.74
SNX8-208ENST00000480807 IQGAP2Q13576 1575 aa25.92■■□□□ 1.74
SNX8-208ENST00000480807 NPM1P06748 294 aaKnown RBP eCLIP25.89■■□□□ 1.74
SNX8-208ENST00000480807 CTTNBP2Q8WZ74 1663 aa25.88■■□□□ 1.73
SNX8-208ENST00000480807 CSRNP3Q8WYN3 585 aa25.87■■□□□ 1.73
SNX8-208ENST00000480807 AEBP2Q6ZN18 517 aaPredicted RBP25.86■■□□□ 1.73
SNX8-208ENST00000480807 KIF13AQ9H1H9 1805 aa25.83■■□□□ 1.73
SNX8-208ENST00000480807 TTBK1Q5TCY1 1321 aaPredicted RBP25.83■■□□□ 1.73
SNX8-208ENST00000480807 ADCY10Q96PN6 1610 aa25.81■■□□□ 1.72
SNX8-208ENST00000480807 CARMIL2Q6F5E8 1435 aa25.81■■□□□ 1.72
SNX8-208ENST00000480807 FAM69CQ0P6D2 419 aa25.78■■□□□ 1.72
SNX8-208ENST00000480807 PTPRGP23470 1445 aa25.77■■□□□ 1.72
SNX8-208ENST00000480807 UGGT2Q9NYU1 1516 aa25.77■■□□□ 1.72
SNX8-208ENST00000480807 MAPKBP1O60336 1514 aa25.74■■□□□ 1.71
SNX8-208ENST00000480807 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
SNX8-208ENST00000480807 TNIKQ9UKE5 1360 aa25.71■■□□□ 1.71
SNX8-208ENST00000480807 KIF21BO75037 1637 aa25.71■■□□□ 1.71
SNX8-208ENST00000480807 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
SNX8-208ENST00000480807 DIP2BQ9P265 1576 aa25.67■■□□□ 1.7
SNX8-208ENST00000480807 DISP1Q96F81 1524 aa25.67■■□□□ 1.7
SNX8-208ENST00000480807 FAM9AQ8IZU1 332 aaPredicted RBP25.66■■□□□ 1.7
SNX8-208ENST00000480807 KIAA0556O60303 1618 aa25.66■■□□□ 1.7
SNX8-208ENST00000480807 ABCC2Q92887 1545 aa25.58■■□□□ 1.69
SNX8-208ENST00000480807 UACAQ9BZF9 1416 aa25.56■■□□□ 1.68
SNX8-208ENST00000480807 TSPOAP1O95153 1857 aa25.55■■□□□ 1.68
SNX8-208ENST00000480807 UHRF1BP1LA0JNW5 1464 aa25.53■■□□□ 1.68
SNX8-208ENST00000480807 ASXL2Q76L83 1435 aa25.51■■□□□ 1.67
SNX8-208ENST00000480807 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
SNX8-208ENST00000480807 PLB1Q6P1J6 1458 aa25.47■■□□□ 1.67
SNX8-208ENST00000480807 KDM6BO15054 1643 aa25.45■■□□□ 1.66
SNX8-208ENST00000480807 KDM5BQ9UGL1 1544 aa25.42■■□□□ 1.66
SNX8-208ENST00000480807 EFCAB5A4FU69 1503 aa25.42■■□□□ 1.66
SNX8-208ENST00000480807 UBTFP17480 764 aaKnown RBP25.41■■□□□ 1.66
SNX8-208ENST00000480807 ZCCHC11Q5TAX3 1644 aaKnown RBP25.39■■□□□ 1.66
SNX8-208ENST00000480807 GLI2P10070 1586 aa25.39■■□□□ 1.65
SNX8-208ENST00000480807 ABCA8O94911 1581 aa25.36■■□□□ 1.65
SNX8-208ENST00000480807 EPRSP07814 1512 aaKnown RBP25.35■■□□□ 1.65
SNX8-208ENST00000480807 PPRC1Q5VV67 1664 aaKnown RBP25.32■■□□□ 1.64
SNX8-208ENST00000480807 P3H3Q8IVL6 736 aa25.3■■□□□ 1.64
SNX8-208ENST00000480807 RANGAP1P46060 587 aaPredicted RBP25.27■■□□□ 1.64
SNX8-208ENST00000480807 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
SNX8-208ENST00000480807 RAPGEF6Q8TEU7 1601 aa25.26■■□□□ 1.63
SNX8-208ENST00000480807 WDR7Q9Y4E6 1490 aa25.26■■□□□ 1.63
SNX8-208ENST00000480807 MAP3K4Q9Y6R4 1608 aa25.26■■□□□ 1.63
SNX8-208ENST00000480807 FHOD3Q2V2M9 1422 aa25.25■■□□□ 1.63
SNX8-208ENST00000480807 KCNH8Q96L42 1107 aa25.23■■□□□ 1.63
SNX8-208ENST00000480807 ARID3CA6NKF2 412 aa25.2■■□□□ 1.62
SNX8-208ENST00000480807 TEX14Q8IWB6 1497 aa25.2■■□□□ 1.62
SNX8-208ENST00000480807 COL17A1Q9UMD9 1497 aaPredicted RBP25.18■■□□□ 1.62
SNX8-208ENST00000480807 KDM4FA0A1W2PPD8 638 aa25.18■■□□□ 1.62
SNX8-208ENST00000480807 FMN1Q68DA7 1419 aa25.17■■□□□ 1.62
SNX8-208ENST00000480807 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
SNX8-208ENST00000480807 CD109Q6YHK3 1445 aa25.12■■□□□ 1.61
SNX8-208ENST00000480807 ATP10BO94823 1461 aa25.11■■□□□ 1.61
SNX8-208ENST00000480807 NUP153P49790 1475 aaKnown RBP25.09■■□□□ 1.61
SNX8-208ENST00000480807 CFAP43Q8NDM7 1665 aa25.09■■□□□ 1.61
SNX8-208ENST00000480807 HECW1Q76N89 1606 aa25.06■■□□□ 1.6
SNX8-208ENST00000480807 MAGI3Q5TCQ9 1506 aa25.06■■□□□ 1.6
SNX8-208ENST00000480807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.05■■□□□ 1.6
SNX8-208ENST00000480807 HNRNPUL2Q1KMD3 747 aaKnown RBP25.05■■□□□ 1.6
SNX8-208ENST00000480807 CLIP1P30622 1438 aa25.03■■□□□ 1.6
SNX8-208ENST00000480807 ADGRL1O94910 1474 aa24.98■■□□□ 1.59
SNX8-208ENST00000480807 PLEKHD1A6NEE1 506 aa24.94■■□□□ 1.58
SNX8-208ENST00000480807 ABCA9Q8IUA7 1624 aa24.92■■□□□ 1.58
SNX8-208ENST00000480807 CASKIN1Q8WXD9 1431 aa24.92■■□□□ 1.58
SNX8-208ENST00000480807 CEP162Q5TB80 1403 aa24.91■■□□□ 1.58
SNX8-208ENST00000480807 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
SNX8-208ENST00000480807 CDK11AQ9UQ88 783 aaPredicted RBP24.9■■□□□ 1.58
SNX8-208ENST00000480807 CDK13Q14004 1512 aaKnown RBP24.9■■□□□ 1.58
SNX8-208ENST00000480807 CCDC18Q5T9S5 1454 aa24.89■■□□□ 1.58
SNX8-208ENST00000480807 FYCO1Q9BQS8 1478 aa24.89■■□□□ 1.58
SNX8-208ENST00000480807 PCF11O94913 1555 aaKnown RBP24.89■■□□□ 1.58
SNX8-208ENST00000480807 LRRIQ1Q96JM4 1722 aa24.86■■□□□ 1.57
SNX8-208ENST00000480807 ARAP3Q8WWN8 1544 aa24.86■■□□□ 1.57
SNX8-208ENST00000480807 PHLDB1Q86UU1 1377 aa24.81■■□□□ 1.56
SNX8-208ENST00000480807 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
SNX8-208ENST00000480807 RAPGEF3O95398 923 aa24.8■■□□□ 1.56
SNX8-208ENST00000480807 NEO1Q92859 1461 aa24.78■■□□□ 1.56
SNX8-208ENST00000480807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.76■■□□□ 1.55
SNX8-208ENST00000480807 KIF14Q15058 1648 aa24.76■■□□□ 1.55
SNX8-208ENST00000480807 TROQ12816 1431 aaPredicted RBP24.76■■□□□ 1.55
SNX8-208ENST00000480807 CFAP74Q9C0B2 1584 aa24.76■■□□□ 1.55
SNX8-208ENST00000480807 TTC37Q6PGP7 1564 aa24.72■■□□□ 1.55
SNX8-208ENST00000480807 MYO5CQ9NQX4 1742 aa24.71■■□□□ 1.55
SNX8-208ENST00000480807 AKNAQ7Z591 1439 aa24.67■■□□□ 1.54
SNX8-208ENST00000480807 FRMPD1Q5SYB0 1578 aa24.67■■□□□ 1.54
SNX8-208ENST00000480807 FANCAO15360 1455 aa24.65■■□□□ 1.54
SNX8-208ENST00000480807 VPS8Q8N3P4 1428 aa24.64■■□□□ 1.54
SNX8-208ENST00000480807 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.53
SNX8-208ENST00000480807 PLCH2O75038 1416 aa24.62■■□□□ 1.53
SNX8-208ENST00000480807 ARID4BQ4LE39 1312 aaPredicted RBP24.61■■□□□ 1.53
SNX8-208ENST00000480807 HECW2Q9P2P5 1572 aa24.6■■□□□ 1.53
SNX8-208ENST00000480807 RICTORQ6R327 1708 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms