RNA–Protein interactions for RNA: ENST00000480650.3

PDZD4-206, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-206ENST00000480650 NUP160Q12769 1436 aa19.57■□□□□ 0.72
PDZD4-206ENST00000480650 UBTFP17480 764 aaKnown RBP19.56■□□□□ 0.72
PDZD4-206ENST00000480650 KIF21BO75037 1637 aa19.54■□□□□ 0.72
PDZD4-206ENST00000480650 ARHGEF11O15085 1522 aa19.52■□□□□ 0.72
PDZD4-206ENST00000480650 CLASP1Q7Z460 1538 aa19.51■□□□□ 0.71
PDZD4-206ENST00000480650 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
PDZD4-206ENST00000480650 GOLGA3Q08378 1498 aa19.5■□□□□ 0.71
PDZD4-206ENST00000480650 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
PDZD4-206ENST00000480650 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
PDZD4-206ENST00000480650 CTTNBP2Q8WZ74 1663 aa19.46■□□□□ 0.71
PDZD4-206ENST00000480650 IQGAP2Q13576 1575 aa19.44■□□□□ 0.7
PDZD4-206ENST00000480650 LOC105371045A0A1W2PR82 267 aa19.41■□□□□ 0.7
PDZD4-206ENST00000480650 PRG4Q92954 1404 aaPredicted RBP19.41■□□□□ 0.7
PDZD4-206ENST00000480650 SHROOM2Q13796 1616 aa19.36■□□□□ 0.69
PDZD4-206ENST00000480650 ARAP1Q96P48 1450 aa19.35■□□□□ 0.69
PDZD4-206ENST00000480650 CARMIL2Q6F5E8 1435 aa19.35■□□□□ 0.69
PDZD4-206ENST00000480650 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
PDZD4-206ENST00000480650 P3H3Q8IVL6 736 aa19.32■□□□□ 0.68
PDZD4-206ENST00000480650 UGGT2Q9NYU1 1516 aa19.31■□□□□ 0.68
PDZD4-206ENST00000480650 CYB5RLQ6IPT4 315 aa19.31■□□□□ 0.68
PDZD4-206ENST00000480650 ERCC6L2Q5T890 1561 aa19.31■□□□□ 0.68
PDZD4-206ENST00000480650 TNIKQ9UKE5 1360 aa19.31■□□□□ 0.68
PDZD4-206ENST00000480650 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
PDZD4-206ENST00000480650 KIAA0556O60303 1618 aa19.23■□□□□ 0.67
PDZD4-206ENST00000480650 PTPRGP23470 1445 aa19.23■□□□□ 0.67
PDZD4-206ENST00000480650 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
PDZD4-206ENST00000480650 CLIP1P30622 1438 aa19.18■□□□□ 0.66
PDZD4-206ENST00000480650 SAMD9Q5K651 1589 aa19.18■□□□□ 0.66
PDZD4-206ENST00000480650 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
PDZD4-206ENST00000480650 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
PDZD4-206ENST00000480650 ARHGAP35Q9NRY4 1499 aa19.14■□□□□ 0.65
PDZD4-206ENST00000480650 TRHP20396 242 aaPredicted RBP19.12■□□□□ 0.65
PDZD4-206ENST00000480650 NPM1P06748 294 aaKnown RBP eCLIP19.1■□□□□ 0.65
PDZD4-206ENST00000480650 ATP1B4Q9UN42 357 aaPredicted RBP19.1■□□□□ 0.65
PDZD4-206ENST00000480650 UACAQ9BZF9 1416 aa19.08■□□□□ 0.64
PDZD4-206ENST00000480650 FMN1Q68DA7 1419 aa19.05■□□□□ 0.64
PDZD4-206ENST00000480650 PLB1Q6P1J6 1458 aa19.04■□□□□ 0.64
PDZD4-206ENST00000480650 ARID3CA6NKF2 412 aa19.02■□□□□ 0.64
PDZD4-206ENST00000480650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.01■□□□□ 0.63
PDZD4-206ENST00000480650 HNRNPUL2Q1KMD3 747 aaKnown RBP19.01■□□□□ 0.63
PDZD4-206ENST00000480650 ADCY10Q96PN6 1610 aa19■□□□□ 0.63
PDZD4-206ENST00000480650 ABCC2Q92887 1545 aa19■□□□□ 0.63
PDZD4-206ENST00000480650 ABCA8O94911 1581 aa18.99■□□□□ 0.63
PDZD4-206ENST00000480650 UHRF1BP1LA0JNW5 1464 aa18.99■□□□□ 0.63
PDZD4-206ENST00000480650 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
PDZD4-206ENST00000480650 HECW1Q76N89 1606 aa18.91■□□□□ 0.62
PDZD4-206ENST00000480650 CASKIN1Q8WXD9 1431 aa18.91■□□□□ 0.62
PDZD4-206ENST00000480650 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
PDZD4-206ENST00000480650 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
PDZD4-206ENST00000480650 ZCCHC11Q5TAX3 1644 aaKnown RBP18.89■□□□□ 0.62
PDZD4-206ENST00000480650 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
PDZD4-206ENST00000480650 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.61
PDZD4-206ENST00000480650 ATP10BO94823 1461 aa18.88■□□□□ 0.61
PDZD4-206ENST00000480650 FYCO1Q9BQS8 1478 aa18.87■□□□□ 0.61
PDZD4-206ENST00000480650 PLEKHD1A6NEE1 506 aa18.85■□□□□ 0.61
PDZD4-206ENST00000480650 APLP2Q06481 763 aa18.85■□□□□ 0.61
PDZD4-206ENST00000480650 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
PDZD4-206ENST00000480650 KCNH8Q96L42 1107 aa18.84■□□□□ 0.61
PDZD4-206ENST00000480650 EPRSP07814 1512 aaKnown RBP18.84■□□□□ 0.61
PDZD4-206ENST00000480650 ASXL2Q76L83 1435 aa18.83■□□□□ 0.61
PDZD4-206ENST00000480650 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
PDZD4-206ENST00000480650 KIF13AQ9H1H9 1805 aa18.82■□□□□ 0.6
PDZD4-206ENST00000480650 CCDC18Q5T9S5 1454 aa18.81■□□□□ 0.6
PDZD4-206ENST00000480650 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
PDZD4-206ENST00000480650 LRRIQ1Q96JM4 1722 aa18.77■□□□□ 0.6
PDZD4-206ENST00000480650 FAM69CQ0P6D2 419 aa18.77■□□□□ 0.6
PDZD4-206ENST00000480650 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.59
PDZD4-206ENST00000480650 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
PDZD4-206ENST00000480650 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
PDZD4-206ENST00000480650 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
PDZD4-206ENST00000480650 TROQ12816 1431 aaPredicted RBP18.68■□□□□ 0.58
PDZD4-206ENST00000480650 DIP2BQ9P265 1576 aa18.67■□□□□ 0.58
PDZD4-206ENST00000480650 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
PDZD4-206ENST00000480650 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
PDZD4-206ENST00000480650 KANK4Q5T7N3 995 aaPredicted RBP18.64■□□□□ 0.57
PDZD4-206ENST00000480650 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
PDZD4-206ENST00000480650 GLI2P10070 1586 aa18.63■□□□□ 0.57
PDZD4-206ENST00000480650 KIF14Q15058 1648 aa18.63■□□□□ 0.57
PDZD4-206ENST00000480650 TSPOAP1O95153 1857 aa18.61■□□□□ 0.57
PDZD4-206ENST00000480650 LRRC9Q6ZRR7 1453 aa18.61■□□□□ 0.57
PDZD4-206ENST00000480650 CD109Q6YHK3 1445 aa18.61■□□□□ 0.57
PDZD4-206ENST00000480650 AEBP2Q6ZN18 517 aaPredicted RBP18.61■□□□□ 0.57
PDZD4-206ENST00000480650 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
PDZD4-206ENST00000480650 EHBP1L1Q8N3D4 1523 aa18.6■□□□□ 0.57
PDZD4-206ENST00000480650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDZD4-206ENST00000480650 ABCA9Q8IUA7 1624 aa18.57■□□□□ 0.56
PDZD4-206ENST00000480650 SUPT6HQ7KZ85 1726 aaKnown RBP18.56■□□□□ 0.56
PDZD4-206ENST00000480650 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
PDZD4-206ENST00000480650 MAP3K4Q9Y6R4 1608 aa18.55■□□□□ 0.56
PDZD4-206ENST00000480650 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
PDZD4-206ENST00000480650 NCOA2Q15596 1464 aa18.52■□□□□ 0.55
PDZD4-206ENST00000480650 EFCAB2Q5VUJ9 269 aa18.51■□□□□ 0.55
PDZD4-206ENST00000480650 MYO5CQ9NQX4 1742 aa18.51■□□□□ 0.55
PDZD4-206ENST00000480650 TEX14Q8IWB6 1497 aa18.51■□□□□ 0.55
PDZD4-206ENST00000480650 CFDP1Q9UEE9 299 aaPredicted RBP18.5■□□□□ 0.55
PDZD4-206ENST00000480650 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
PDZD4-206ENST00000480650 PLCH2O75038 1416 aa18.49■□□□□ 0.55
PDZD4-206ENST00000480650 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
PDZD4-206ENST00000480650 GPATCH8Q9UKJ3 1502 aaKnown RBP18.46■□□□□ 0.55
PDZD4-206ENST00000480650 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms