RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 IGF1RP08069 1367 aa11.65□□□□□ -0.55
FN1-220ENST00000480024 JPH4Q96JJ6 628 aa11.64□□□□□ -0.55
FN1-220ENST00000480024 KIAA0586Q9BVV6 1533 aa11.62□□□□□ -0.55
FN1-220ENST00000480024 KIF13AQ9H1H9 1805 aa11.62□□□□□ -0.55
FN1-220ENST00000480024 ADCY10Q96PN6 1610 aa11.6□□□□□ -0.55
FN1-220ENST00000480024 CARMIL1Q5VZK9 1371 aa11.58□□□□□ -0.56
FN1-220ENST00000480024 IQGAP2Q13576 1575 aa11.56□□□□□ -0.56
FN1-220ENST00000480024 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
FN1-220ENST00000480024 DIP2BQ9P265 1576 aa11.53□□□□□ -0.56
FN1-220ENST00000480024 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
FN1-220ENST00000480024 TTBK1Q5TCY1 1321 aaPredicted RBP11.52□□□□□ -0.57
FN1-220ENST00000480024 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
FN1-220ENST00000480024 PTPRGP23470 1445 aa11.51□□□□□ -0.57
FN1-220ENST00000480024 CARMIL2Q6F5E8 1435 aa11.51□□□□□ -0.57
FN1-220ENST00000480024 RAPGEF2Q9Y4G8 1499 aa11.51□□□□□ -0.57
FN1-220ENST00000480024 FAM69CQ0P6D2 419 aa11.49□□□□□ -0.57
FN1-220ENST00000480024 TNIKQ9UKE5 1360 aa11.48□□□□□ -0.57
FN1-220ENST00000480024 DISP1Q96F81 1524 aa11.48□□□□□ -0.57
FN1-220ENST00000480024 TSPOAP1O95153 1857 aa11.48□□□□□ -0.57
FN1-220ENST00000480024 CTTNBP2Q8WZ74 1663 aa11.47□□□□□ -0.57
FN1-220ENST00000480024 KIAA0556O60303 1618 aa11.46□□□□□ -0.57
FN1-220ENST00000480024 ABCC2Q92887 1545 aa11.45□□□□□ -0.58
FN1-220ENST00000480024 UGGT2Q9NYU1 1516 aa11.45□□□□□ -0.58
FN1-220ENST00000480024 AEBP2Q6ZN18 517 aaPredicted RBP11.44□□□□□ -0.58
FN1-220ENST00000480024 UHRF1BP1LA0JNW5 1464 aa11.43□□□□□ -0.58
FN1-220ENST00000480024 UACAQ9BZF9 1416 aa11.43□□□□□ -0.58
FN1-220ENST00000480024 KDM6BO15054 1643 aa11.42□□□□□ -0.58
FN1-220ENST00000480024 ASXL2Q76L83 1435 aa11.42□□□□□ -0.58
FN1-220ENST00000480024 ZCCHC11Q5TAX3 1644 aaKnown RBP11.4□□□□□ -0.58
FN1-220ENST00000480024 PLB1Q6P1J6 1458 aa11.39□□□□□ -0.59
FN1-220ENST00000480024 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
FN1-220ENST00000480024 PPRC1Q5VV67 1664 aaKnown RBP11.38□□□□□ -0.59
FN1-220ENST00000480024 KDM5BQ9UGL1 1544 aa11.38□□□□□ -0.59
FN1-220ENST00000480024 GLI2P10070 1586 aa11.37□□□□□ -0.59
FN1-220ENST00000480024 GOLGA3Q08378 1498 aa11.37□□□□□ -0.59
FN1-220ENST00000480024 MAP3K4Q9Y6R4 1608 aa11.35□□□□□ -0.59
FN1-220ENST00000480024 EPRSP07814 1512 aaKnown RBP11.35□□□□□ -0.59
FN1-220ENST00000480024 ABCA8O94911 1581 aa11.33□□□□□ -0.6
FN1-220ENST00000480024 WDR7Q9Y4E6 1490 aa11.32□□□□□ -0.6
FN1-220ENST00000480024 TEX14Q8IWB6 1497 aa11.29□□□□□ -0.6
FN1-220ENST00000480024 SAMD9Q5K651 1589 aa11.28□□□□□ -0.6
FN1-220ENST00000480024 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
FN1-220ENST00000480024 CFAP43Q8NDM7 1665 aa11.27□□□□□ -0.61
FN1-220ENST00000480024 EEA1Q15075 1411 aa11.26□□□□□ -0.61
FN1-220ENST00000480024 P3H3Q8IVL6 736 aa11.26□□□□□ -0.61
FN1-220ENST00000480024 COL17A1Q9UMD9 1497 aaPredicted RBP11.25□□□□□ -0.61
FN1-220ENST00000480024 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
FN1-220ENST00000480024 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
FN1-220ENST00000480024 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
FN1-220ENST00000480024 FAM9AQ8IZU1 332 aaPredicted RBP11.23□□□□□ -0.61
FN1-220ENST00000480024 KCNH8Q96L42 1107 aa11.23□□□□□ -0.61
FN1-220ENST00000480024 KIF21BO75037 1637 aa11.22□□□□□ -0.61
FN1-220ENST00000480024 RANGAP1P46060 587 aaPredicted RBP11.22□□□□□ -0.61
FN1-220ENST00000480024 CD109Q6YHK3 1445 aa11.22□□□□□ -0.61
FN1-220ENST00000480024 MAGI3Q5TCQ9 1506 aa11.21□□□□□ -0.61
FN1-220ENST00000480024 ATP10BO94823 1461 aa11.2□□□□□ -0.62
FN1-220ENST00000480024 ADGRL1O94910 1474 aa11.2□□□□□ -0.62
FN1-220ENST00000480024 FHOD3Q2V2M9 1422 aa11.2□□□□□ -0.62
FN1-220ENST00000480024 ABCA9Q8IUA7 1624 aa11.18□□□□□ -0.62
FN1-220ENST00000480024 NUP153P49790 1475 aaKnown RBP11.18□□□□□ -0.62
FN1-220ENST00000480024 EFCAB5A4FU69 1503 aa11.16□□□□□ -0.62
FN1-220ENST00000480024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.15□□□□□ -0.62
FN1-220ENST00000480024 HNRNPUL2Q1KMD3 747 aaKnown RBP11.15□□□□□ -0.62
FN1-220ENST00000480024 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
FN1-220ENST00000480024 ARAP3Q8WWN8 1544 aa11.12□□□□□ -0.63
FN1-220ENST00000480024 CDK13Q14004 1512 aaKnown RBP11.1□□□□□ -0.63
FN1-220ENST00000480024 CHIC1Q5VXU3 224 aa11.1□□□□□ -0.63
FN1-220ENST00000480024 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
FN1-220ENST00000480024 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
FN1-220ENST00000480024 NEO1Q92859 1461 aa11.09□□□□□ -0.63
FN1-220ENST00000480024 UBTFP17480 764 aaKnown RBP11.08□□□□□ -0.64
FN1-220ENST00000480024 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
FN1-220ENST00000480024 HECW1Q76N89 1606 aa11.07□□□□□ -0.64
FN1-220ENST00000480024 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
FN1-220ENST00000480024 CFAP74Q9C0B2 1584 aa11.07□□□□□ -0.64
FN1-220ENST00000480024 PLEKHD1A6NEE1 506 aa11.06□□□□□ -0.64
FN1-220ENST00000480024 HECW2Q9P2P5 1572 aa11.06□□□□□ -0.64
FN1-220ENST00000480024 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
FN1-220ENST00000480024 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
FN1-220ENST00000480024 RICTORQ6R327 1708 aa11.04□□□□□ -0.64
FN1-220ENST00000480024 FMN1Q68DA7 1419 aa11.04□□□□□ -0.64
FN1-220ENST00000480024 FANCAO15360 1455 aa11.04□□□□□ -0.64
FN1-220ENST00000480024 ARHGEF40Q8TER5 1519 aa11.04□□□□□ -0.64
FN1-220ENST00000480024 DENND4BO75064 1496 aaPredicted RBP11.02□□□□□ -0.65
FN1-220ENST00000480024 ATP1B4Q9UN42 357 aaPredicted RBP11.02□□□□□ -0.65
FN1-220ENST00000480024 AKNAQ7Z591 1439 aa11.01□□□□□ -0.65
FN1-220ENST00000480024 LRRIQ1Q96JM4 1722 aa11.01□□□□□ -0.65
FN1-220ENST00000480024 ADAMTSL3P82987 1691 aa11.01□□□□□ -0.65
FN1-220ENST00000480024 BCORL1Q5H9F3 1711 aa11.01□□□□□ -0.65
FN1-220ENST00000480024 MYO5CQ9NQX4 1742 aa11.01□□□□□ -0.65
FN1-220ENST00000480024 KIF14Q15058 1648 aa11□□□□□ -0.65
FN1-220ENST00000480024 PCF11O94913 1555 aaKnown RBP10.99□□□□□ -0.65
FN1-220ENST00000480024 MADDQ8WXG6 1647 aa10.99□□□□□ -0.65
FN1-220ENST00000480024 ZMYM4Q5VZL5 1548 aa10.99□□□□□ -0.65
FN1-220ENST00000480024 ARID4BQ4LE39 1312 aaPredicted RBP10.98□□□□□ -0.65
FN1-220ENST00000480024 ZFYVE16Q7Z3T8 1539 aa10.98□□□□□ -0.65
FN1-220ENST00000480024 PTPRMP28827 1452 aa10.97□□□□□ -0.65
FN1-220ENST00000480024 SIGLEC1Q9BZZ2 1709 aa10.96□□□□□ -0.65
FN1-220ENST00000480024 RIMS1Q86UR5 1692 aaKnown RBP10.96□□□□□ -0.65
FN1-220ENST00000480024 PLCH2O75038 1416 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms