RNA–Protein interactions for RNA: ENST00000479818.5

PLXNB2-210, Transcript of plexin B2, humanhuman

TSL 1 (best)

Gene PLXNB2, Length 1,916 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB2-210ENST00000479818 VPS8Q8N3P4 1428 aa27.44■■□□□ 1.98
PLXNB2-210ENST00000479818 PPARGC1BQ86YN6 1023 aaKnown RBP27.39■■□□□ 1.98
PLXNB2-210ENST00000479818 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
PLXNB2-210ENST00000479818 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
PLXNB2-210ENST00000479818 EFCAB5A4FU69 1503 aa27.31■■□□□ 1.96
PLXNB2-210ENST00000479818 IQGAP2Q13576 1575 aa27.31■■□□□ 1.96
PLXNB2-210ENST00000479818 CHMP7Q8WUX9 453 aaPredicted RBP27.3■■□□□ 1.96
PLXNB2-210ENST00000479818 FBLN2P98095 1184 aa27.29■■□□□ 1.96
PLXNB2-210ENST00000479818 P3H3Q8IVL6 736 aa27.29■■□□□ 1.96
PLXNB2-210ENST00000479818 PCGF6Q9BYE7 350 aa27.26■■□□□ 1.95
PLXNB2-210ENST00000479818 SAMD9Q5K651 1589 aa27.26■■□□□ 1.95
PLXNB2-210ENST00000479818 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
PLXNB2-210ENST00000479818 FHOD3Q2V2M9 1422 aa27.23■■□□□ 1.95
PLXNB2-210ENST00000479818 CHD1O14646 1710 aa27.22■■□□□ 1.95
PLXNB2-210ENST00000479818 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
PLXNB2-210ENST00000479818 TRIM26Q12899 539 aaPredicted RBP27.22■■□□□ 1.95
PLXNB2-210ENST00000479818 KIAA0586Q9BVV6 1533 aa27.19■■□□□ 1.94
PLXNB2-210ENST00000479818 APLP2Q06481 763 aa27.18■■□□□ 1.94
PLXNB2-210ENST00000479818 PCF11O94913 1555 aaKnown RBP27.13■■□□□ 1.93
PLXNB2-210ENST00000479818 NUP160Q12769 1436 aa27.13■■□□□ 1.93
PLXNB2-210ENST00000479818 UGGT2Q9NYU1 1516 aa27.12■■□□□ 1.93
PLXNB2-210ENST00000479818 FMN1Q68DA7 1419 aa27.05■■□□□ 1.92
PLXNB2-210ENST00000479818 KIAA0556O60303 1618 aa27.04■■□□□ 1.92
PLXNB2-210ENST00000479818 DISP1Q96F81 1524 aa27.01■■□□□ 1.91
PLXNB2-210ENST00000479818 ATP1B4Q9UN42 357 aaPredicted RBP27■■□□□ 1.91
PLXNB2-210ENST00000479818 FYCO1Q9BQS8 1478 aa27■■□□□ 1.91
PLXNB2-210ENST00000479818 CASKIN1Q8WXD9 1431 aa26.99■■□□□ 1.91
PLXNB2-210ENST00000479818 TIAM1Q13009 1591 aa26.99■■□□□ 1.91
PLXNB2-210ENST00000479818 CFAP43Q8NDM7 1665 aa26.98■■□□□ 1.91
PLXNB2-210ENST00000479818 LRRIQ1Q96JM4 1722 aa26.96■■□□□ 1.91
PLXNB2-210ENST00000479818 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
PLXNB2-210ENST00000479818 JPH4Q96JJ6 628 aa26.93■■□□□ 1.9
PLXNB2-210ENST00000479818 MAP3K1Q13233 1512 aa26.93■■□□□ 1.9
PLXNB2-210ENST00000479818 CARMIL2Q6F5E8 1435 aa26.86■■□□□ 1.89
PLXNB2-210ENST00000479818 HECW1Q76N89 1606 aa26.85■■□□□ 1.89
PLXNB2-210ENST00000479818 LRRC9Q6ZRR7 1453 aa26.83■■□□□ 1.89
PLXNB2-210ENST00000479818 SHROOM2Q13796 1616 aa26.83■■□□□ 1.88
PLXNB2-210ENST00000479818 PRG4Q92954 1404 aaPredicted RBP26.79■■□□□ 1.88
PLXNB2-210ENST00000479818 CLASP1Q7Z460 1538 aa26.79■■□□□ 1.88
PLXNB2-210ENST00000479818 RAPGEF6Q8TEU7 1601 aa26.78■■□□□ 1.88
PLXNB2-210ENST00000479818 CCDC18Q5T9S5 1454 aa26.73■■□□□ 1.87
PLXNB2-210ENST00000479818 EPRSP07814 1512 aaKnown RBP26.71■■□□□ 1.87
PLXNB2-210ENST00000479818 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.86
PLXNB2-210ENST00000479818 PLB1Q6P1J6 1458 aa26.69■■□□□ 1.86
PLXNB2-210ENST00000479818 ERCC6L2Q5T890 1561 aa26.69■■□□□ 1.86
PLXNB2-210ENST00000479818 ARID3CA6NKF2 412 aa26.69■■□□□ 1.86
PLXNB2-210ENST00000479818 NUP153P49790 1475 aaKnown RBP26.67■■□□□ 1.86
PLXNB2-210ENST00000479818 MTUS2Q5JR59 1369 aa26.66■■□□□ 1.86
PLXNB2-210ENST00000479818 MAGI3Q5TCQ9 1506 aa26.64■■□□□ 1.85
PLXNB2-210ENST00000479818 EHBP1L1Q8N3D4 1523 aa26.62■■□□□ 1.85
PLXNB2-210ENST00000479818 ABCA8O94911 1581 aa26.62■■□□□ 1.85
PLXNB2-210ENST00000479818 PTPRGP23470 1445 aa26.6■■□□□ 1.85
PLXNB2-210ENST00000479818 SUPT6HQ7KZ85 1726 aaKnown RBP26.6■■□□□ 1.85
PLXNB2-210ENST00000479818 PHLDB1Q86UU1 1377 aa26.59■■□□□ 1.85
PLXNB2-210ENST00000479818 RRBP1Q9P2E9 1410 aaKnown RBP26.58■■□□□ 1.85
PLXNB2-210ENST00000479818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.55■■□□□ 1.84
PLXNB2-210ENST00000479818 HNRNPUL2Q1KMD3 747 aaKnown RBP26.55■■□□□ 1.84
PLXNB2-210ENST00000479818 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
PLXNB2-210ENST00000479818 CCNB3Q8WWL7 1395 aa26.52■■□□□ 1.84
PLXNB2-210ENST00000479818 NCOA2Q15596 1464 aa26.51■■□□□ 1.83
PLXNB2-210ENST00000479818 UACAQ9BZF9 1416 aa26.45■■□□□ 1.82
PLXNB2-210ENST00000479818 ARHGEF11O15085 1522 aa26.44■■□□□ 1.82
PLXNB2-210ENST00000479818 ATP10BO94823 1461 aa26.43■■□□□ 1.82
PLXNB2-210ENST00000479818 CDK11AQ9UQ88 783 aaPredicted RBP26.43■■□□□ 1.82
PLXNB2-210ENST00000479818 ABCC2Q92887 1545 aa26.4■■□□□ 1.82
PLXNB2-210ENST00000479818 MYOM3Q5VTT5 1437 aa26.39■■□□□ 1.82
PLXNB2-210ENST00000479818 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.82
PLXNB2-210ENST00000479818 FAM50AQ14320 339 aaKnown RBP26.38■■□□□ 1.81
PLXNB2-210ENST00000479818 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
PLXNB2-210ENST00000479818 ITGAEP38570 1179 aa26.37■■□□□ 1.81
PLXNB2-210ENST00000479818 ADCY10Q96PN6 1610 aa26.36■■□□□ 1.81
PLXNB2-210ENST00000479818 HRCP23327 699 aa26.35■■□□□ 1.81
PLXNB2-210ENST00000479818 KIF14Q15058 1648 aa26.35■■□□□ 1.81
PLXNB2-210ENST00000479818 PTPN23Q9H3S7 1636 aa26.32■■□□□ 1.8
PLXNB2-210ENST00000479818 PLEKHD1A6NEE1 506 aa26.3■■□□□ 1.8
PLXNB2-210ENST00000479818 ZCCHC11Q5TAX3 1644 aaKnown RBP26.29■■□□□ 1.8
PLXNB2-210ENST00000479818 UHRF1BP1LA0JNW5 1464 aa26.28■■□□□ 1.8
PLXNB2-210ENST00000479818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.26■■□□□ 1.793e-8■□□□□ 10.2
PLXNB2-210ENST00000479818 ITSN2Q9NZM3 1697 aa26.25■■□□□ 1.79
PLXNB2-210ENST00000479818 CDC42BPAQ5VT25 1732 aa26.21■■□□□ 1.79
PLXNB2-210ENST00000479818 MIA2Q96PC5 1412 aa26.21■■□□□ 1.79
PLXNB2-210ENST00000479818 TCOF1Q13428 1488 aaKnown RBP26.2■■□□□ 1.78
PLXNB2-210ENST00000479818 KDM5BQ9UGL1 1544 aa26.2■■□□□ 1.78
PLXNB2-210ENST00000479818 CCER1Q8TC90 406 aaPredicted RBP26.2■■□□□ 1.78
PLXNB2-210ENST00000479818 GPATCH8Q9UKJ3 1502 aaKnown RBP26.16■■□□□ 1.78
PLXNB2-210ENST00000479818 ABCC10Q5T3U5 1492 aa26.16■■□□□ 1.78
PLXNB2-210ENST00000479818 PTPRKQ15262 1439 aa26.1■■□□□ 1.77
PLXNB2-210ENST00000479818 CFDP1Q9UEE9 299 aaPredicted RBP26.09■■□□□ 1.77
PLXNB2-210ENST00000479818 TTC37Q6PGP7 1564 aa26.09■■□□□ 1.77
PLXNB2-210ENST00000479818 ZNF644Q9H582 1327 aaPredicted RBP26.07■■□□□ 1.76
PLXNB2-210ENST00000479818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.07■■□□□ 1.76
PLXNB2-210ENST00000479818 CDC42BPBQ9Y5S2 1711 aa26.07■■□□□ 1.76
PLXNB2-210ENST00000479818 CAMSAP2Q08AD1 1489 aa26.07■■□□□ 1.76
PLXNB2-210ENST00000479818 PREX2Q70Z35 1606 aa26.06■■□□□ 1.76
PLXNB2-210ENST00000479818 RIMBP3CA6NJZ7 1639 aa26.05■■□□□ 1.76
PLXNB2-210ENST00000479818 RIMBP3BA6NNM3 1639 aa26.05■■□□□ 1.76
PLXNB2-210ENST00000479818 RIMBP3Q9UFD9 1639 aa26.05■■□□□ 1.76
PLXNB2-210ENST00000479818 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
PLXNB2-210ENST00000479818 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
PLXNB2-210ENST00000479818 MYO5CQ9NQX4 1742 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms