RNA–Protein interactions for RNA: ENST00000479739.6

SH3YL1-222, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 2

Gene SH3YL1, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-222ENST00000479739 CUL7Q14999 1698 aa14.37□□□□□ -0.11
SH3YL1-222ENST00000479739 MYT1Q01538 1121 aa14.37□□□□□ -0.11
SH3YL1-222ENST00000479739 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
SH3YL1-222ENST00000479739 RUSC2Q8N2Y8 1516 aa14.32□□□□□ -0.12
SH3YL1-222ENST00000479739 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
SH3YL1-222ENST00000479739 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
SH3YL1-222ENST00000479739 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
SH3YL1-222ENST00000479739 ERCC6L2Q5T890 1561 aa14.25□□□□□ -0.13
SH3YL1-222ENST00000479739 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
SH3YL1-222ENST00000479739 KIAA0586Q9BVV6 1533 aa14.23□□□□□ -0.13
SH3YL1-222ENST00000479739 RAPGEF2Q9Y4G8 1499 aa14.21□□□□□ -0.13
SH3YL1-222ENST00000479739 JPH4Q96JJ6 628 aa14.19□□□□□ -0.14
SH3YL1-222ENST00000479739 PRXQ9BXM0 1461 aa14.19□□□□□ -0.14
SH3YL1-222ENST00000479739 PRG4Q92954 1404 aaPredicted RBP14.18□□□□□ -0.14
SH3YL1-222ENST00000479739 IQGAP2Q13576 1575 aa14.15□□□□□ -0.14
SH3YL1-222ENST00000479739 EEA1Q15075 1411 aa14.15□□□□□ -0.14
SH3YL1-222ENST00000479739 CTTNBP2Q8WZ74 1663 aa14.11□□□□□ -0.15
SH3YL1-222ENST00000479739 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
SH3YL1-222ENST00000479739 UGGT2Q9NYU1 1516 aa14.09□□□□□ -0.15
SH3YL1-222ENST00000479739 DISP1Q96F81 1524 aa14.07□□□□□ -0.16
SH3YL1-222ENST00000479739 CARMIL2Q6F5E8 1435 aa14.04□□□□□ -0.16
SH3YL1-222ENST00000479739 KIF21BO75037 1637 aa14.03□□□□□ -0.16
SH3YL1-222ENST00000479739 KIAA0556O60303 1618 aa14.02□□□□□ -0.16
SH3YL1-222ENST00000479739 TNIKQ9UKE5 1360 aa14.02□□□□□ -0.17
SH3YL1-222ENST00000479739 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
SH3YL1-222ENST00000479739 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
SH3YL1-222ENST00000479739 PTPRGP23470 1445 aa14□□□□□ -0.17
SH3YL1-222ENST00000479739 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
SH3YL1-222ENST00000479739 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
SH3YL1-222ENST00000479739 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
SH3YL1-222ENST00000479739 MAPKBP1O60336 1514 aa13.93□□□□□ -0.18
SH3YL1-222ENST00000479739 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
SH3YL1-222ENST00000479739 TRHP20396 242 aaPredicted RBP13.92□□□□□ -0.18
SH3YL1-222ENST00000479739 ABCC2Q92887 1545 aa13.92□□□□□ -0.18
SH3YL1-222ENST00000479739 TTBK1Q5TCY1 1321 aaPredicted RBP13.9□□□□□ -0.19
SH3YL1-222ENST00000479739 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
SH3YL1-222ENST00000479739 ABCA8O94911 1581 aa13.88□□□□□ -0.19
SH3YL1-222ENST00000479739 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
SH3YL1-222ENST00000479739 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
SH3YL1-222ENST00000479739 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
SH3YL1-222ENST00000479739 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
SH3YL1-222ENST00000479739 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
SH3YL1-222ENST00000479739 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
SH3YL1-222ENST00000479739 EFCAB5A4FU69 1503 aa13.85□□□□□ -0.19
SH3YL1-222ENST00000479739 ZCCHC11Q5TAX3 1644 aaKnown RBP13.84□□□□□ -0.19
SH3YL1-222ENST00000479739 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
SH3YL1-222ENST00000479739 UBTFP17480 764 aaKnown RBP13.81□□□□□ -0.2
SH3YL1-222ENST00000479739 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
SH3YL1-222ENST00000479739 ASXL2Q76L83 1435 aa13.81□□□□□ -0.2
SH3YL1-222ENST00000479739 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
SH3YL1-222ENST00000479739 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
SH3YL1-222ENST00000479739 RANGAP1P46060 587 aaPredicted RBP13.78□□□□□ -0.2
SH3YL1-222ENST00000479739 ARHGAP35Q9NRY4 1499 aa13.78□□□□□ -0.2
SH3YL1-222ENST00000479739 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.21
SH3YL1-222ENST00000479739 CCER1Q8TC90 406 aaPredicted RBP13.77□□□□□ -0.21
SH3YL1-222ENST00000479739 GLI2P10070 1586 aa13.77□□□□□ -0.21
SH3YL1-222ENST00000479739 ATP10BO94823 1461 aa13.75□□□□□ -0.21
SH3YL1-222ENST00000479739 WDR7Q9Y4E6 1490 aa13.75□□□□□ -0.21
SH3YL1-222ENST00000479739 EPRSP07814 1512 aaKnown RBP13.75□□□□□ -0.21
SH3YL1-222ENST00000479739 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
SH3YL1-222ENST00000479739 ACIN1Q9UKV3 1341 aaKnown RBP13.73□□□□□ -0.21
SH3YL1-222ENST00000479739 PPRC1Q5VV67 1664 aaKnown RBP13.71□□□□□ -0.21
SH3YL1-222ENST00000479739 MAP3K4Q9Y6R4 1608 aa13.71□□□□□ -0.21
SH3YL1-222ENST00000479739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
SH3YL1-222ENST00000479739 CENPBP07199 599 aaPredicted RBP13.7□□□□□ -0.22
SH3YL1-222ENST00000479739 TSPOAP1O95153 1857 aa13.7□□□□□ -0.22
SH3YL1-222ENST00000479739 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
SH3YL1-222ENST00000479739 CEP162Q5TB80 1403 aa13.69□□□□□ -0.22
SH3YL1-222ENST00000479739 ARID3CA6NKF2 412 aa13.66□□□□□ -0.22
SH3YL1-222ENST00000479739 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
SH3YL1-222ENST00000479739 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
SH3YL1-222ENST00000479739 CLIP1P30622 1438 aa13.65□□□□□ -0.22
SH3YL1-222ENST00000479739 HECW1Q76N89 1606 aa13.65□□□□□ -0.22
SH3YL1-222ENST00000479739 LRRIQ1Q96JM4 1722 aa13.63□□□□□ -0.23
SH3YL1-222ENST00000479739 CDK13Q14004 1512 aaKnown RBP13.63□□□□□ -0.23
SH3YL1-222ENST00000479739 ABCA9Q8IUA7 1624 aa13.62□□□□□ -0.23
SH3YL1-222ENST00000479739 MAGI3Q5TCQ9 1506 aa13.61□□□□□ -0.23
SH3YL1-222ENST00000479739 KCNH8Q96L42 1107 aa13.61□□□□□ -0.23
SH3YL1-222ENST00000479739 PCF11O94913 1555 aaKnown RBP13.61□□□□□ -0.23
SH3YL1-222ENST00000479739 KDM6BO15054 1643 aa13.61□□□□□ -0.23
SH3YL1-222ENST00000479739 CD109Q6YHK3 1445 aa13.6□□□□□ -0.23
SH3YL1-222ENST00000479739 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
SH3YL1-222ENST00000479739 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
SH3YL1-222ENST00000479739 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
SH3YL1-222ENST00000479739 HNRNPUL2Q1KMD3 747 aaKnown RBP13.59□□□□□ -0.23
SH3YL1-222ENST00000479739 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
SH3YL1-222ENST00000479739 PLEKHD1A6NEE1 506 aa13.56□□□□□ -0.24
SH3YL1-222ENST00000479739 COL17A1Q9UMD9 1497 aaPredicted RBP13.56□□□□□ -0.24
SH3YL1-222ENST00000479739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.55□□□□□ -0.24
SH3YL1-222ENST00000479739 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
SH3YL1-222ENST00000479739 TTC37Q6PGP7 1564 aa13.54□□□□□ -0.24
SH3YL1-222ENST00000479739 ZNF316A6NFI3 1004 aaPredicted RBP13.53□□□□□ -0.24
SH3YL1-222ENST00000479739 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
SH3YL1-222ENST00000479739 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.25
SH3YL1-222ENST00000479739 GTF3C3Q9Y5Q9 886 aa13.51□□□□□ -0.25
SH3YL1-222ENST00000479739 KIF14Q15058 1648 aa13.5□□□□□ -0.25
SH3YL1-222ENST00000479739 CDK11AQ9UQ88 783 aaPredicted RBP13.5□□□□□ -0.25
SH3YL1-222ENST00000479739 NEO1Q92859 1461 aa13.5□□□□□ -0.25
SH3YL1-222ENST00000479739 ARAP3Q8WWN8 1544 aa13.5□□□□□ -0.25
SH3YL1-222ENST00000479739 PHLDB1Q86UU1 1377 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms