RNA–Protein interactions for RNA: ENST00000479529.2

CCDC17-205, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-205ENST00000479529 GRIN2AQ12879 1464 aa29.97■■■□□ 2.39
CCDC17-205ENST00000479529 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
CCDC17-205ENST00000479529 ARHGAP35Q9NRY4 1499 aa29.89■■■□□ 2.38
CCDC17-205ENST00000479529 ARAP1Q96P48 1450 aa29.85■■■□□ 2.37
CCDC17-205ENST00000479529 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
CCDC17-205ENST00000479529 IQGAP2Q13576 1575 aa29.8■■■□□ 2.36
CCDC17-205ENST00000479529 P3H3Q8IVL6 736 aa29.79■■■□□ 2.36
CCDC17-205ENST00000479529 CHD1O14646 1710 aa29.79■■■□□ 2.36
CCDC17-205ENST00000479529 VPS8Q8N3P4 1428 aa29.76■■■□□ 2.35
CCDC17-205ENST00000479529 KIAA0586Q9BVV6 1533 aa29.75■■■□□ 2.35
CCDC17-205ENST00000479529 NUP160Q12769 1436 aa29.75■■■□□ 2.35
CCDC17-205ENST00000479529 EFCAB5A4FU69 1503 aa29.7■■■□□ 2.35
CCDC17-205ENST00000479529 FHOD3Q2V2M9 1422 aa29.7■■■□□ 2.35
CCDC17-205ENST00000479529 SAMD9Q5K651 1589 aa29.67■■■□□ 2.34
CCDC17-205ENST00000479529 PPARGC1BQ86YN6 1023 aaKnown RBP29.67■■■□□ 2.34
CCDC17-205ENST00000479529 UGGT2Q9NYU1 1516 aa29.62■■■□□ 2.33
CCDC17-205ENST00000479529 JPH4Q96JJ6 628 aa29.55■■■□□ 2.32
CCDC17-205ENST00000479529 DISP1Q96F81 1524 aa29.55■■■□□ 2.32
CCDC17-205ENST00000479529 TTBK1Q5TCY1 1321 aaPredicted RBP29.51■■■□□ 2.31
CCDC17-205ENST00000479529 KIAA0556O60303 1618 aa29.5■■■□□ 2.31
CCDC17-205ENST00000479529 PCF11O94913 1555 aaKnown RBP29.48■■■□□ 2.31
CCDC17-205ENST00000479529 FMN1Q68DA7 1419 aa29.46■■■□□ 2.31
CCDC17-205ENST00000479529 APLP2Q06481 763 aa29.44■■■□□ 2.3
CCDC17-205ENST00000479529 ATP1B4Q9UN42 357 aaPredicted RBP29.42■■■□□ 2.3
CCDC17-205ENST00000479529 CLASP1Q7Z460 1538 aa29.41■■■□□ 2.3
CCDC17-205ENST00000479529 PRG4Q92954 1404 aaPredicted RBP29.38■■■□□ 2.29
CCDC17-205ENST00000479529 CARMIL2Q6F5E8 1435 aa29.37■■■□□ 2.29
CCDC17-205ENST00000479529 CASKIN1Q8WXD9 1431 aa29.37■■■□□ 2.29
CCDC17-205ENST00000479529 SHROOM2Q13796 1616 aa29.36■■■□□ 2.29
CCDC17-205ENST00000479529 FYCO1Q9BQS8 1478 aa29.36■■■□□ 2.29
CCDC17-205ENST00000479529 KANK4Q5T7N3 995 aaPredicted RBP29.32■■■□□ 2.28
CCDC17-205ENST00000479529 ERCC6L2Q5T890 1561 aa29.3■■■□□ 2.28
CCDC17-205ENST00000479529 TIAM1Q13009 1591 aa29.27■■■□□ 2.28
CCDC17-205ENST00000479529 OSCARQ8IYS5 282 aa29.27■■■□□ 2.28
CCDC17-205ENST00000479529 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
CCDC17-205ENST00000479529 LRRIQ1Q96JM4 1722 aa29.26■■■□□ 2.28
CCDC17-205ENST00000479529 TRIM26Q12899 539 aaPredicted RBP29.25■■■□□ 2.27
CCDC17-205ENST00000479529 CFAP43Q8NDM7 1665 aa29.21■■■□□ 2.27
CCDC17-205ENST00000479529 PLB1Q6P1J6 1458 aa29.21■■■□□ 2.27
CCDC17-205ENST00000479529 ARID3CA6NKF2 412 aa29.21■■■□□ 2.27
CCDC17-205ENST00000479529 MAP3K1Q13233 1512 aa29.21■■■□□ 2.27
CCDC17-205ENST00000479529 HECW1Q76N89 1606 aa29.19■■■□□ 2.26
CCDC17-205ENST00000479529 RAPGEF6Q8TEU7 1601 aa29.18■■■□□ 2.26
CCDC17-205ENST00000479529 PTPRGP23470 1445 aa29.15■■■□□ 2.26
CCDC17-205ENST00000479529 LRRC9Q6ZRR7 1453 aa29.14■■■□□ 2.26
CCDC17-205ENST00000479529 NUP153P49790 1475 aaKnown RBP29.13■■■□□ 2.25
CCDC17-205ENST00000479529 EPRSP07814 1512 aaKnown RBP29.13■■■□□ 2.25
CCDC17-205ENST00000479529 CDK13Q14004 1512 aaKnown RBP29.12■■■□□ 2.25
CCDC17-205ENST00000479529 CCDC18Q5T9S5 1454 aa29.08■■■□□ 2.25
CCDC17-205ENST00000479529 ABCA8O94911 1581 aa29.08■■■□□ 2.25
CCDC17-205ENST00000479529 MAGI3Q5TCQ9 1506 aa29.03■■■□□ 2.24
CCDC17-205ENST00000479529 MTUS2Q5JR59 1369 aa29.02■■■□□ 2.24
CCDC17-205ENST00000479529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.99■■■□□ 2.23
CCDC17-205ENST00000479529 HNRNPUL2Q1KMD3 747 aaKnown RBP28.99■■■□□ 2.23
CCDC17-205ENST00000479529 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
CCDC17-205ENST00000479529 EHBP1L1Q8N3D4 1523 aa28.93■■■□□ 2.22
CCDC17-205ENST00000479529 PHLDB1Q86UU1 1377 aa28.92■■■□□ 2.22
CCDC17-205ENST00000479529 ATP10BO94823 1461 aa28.91■■■□□ 2.22
CCDC17-205ENST00000479529 HRCP23327 699 aa28.91■■■□□ 2.22
CCDC17-205ENST00000479529 ABCC2Q92887 1545 aa28.89■■■□□ 2.22
CCDC17-205ENST00000479529 NCOA2Q15596 1464 aa28.85■■■□□ 2.21
CCDC17-205ENST00000479529 SUPT6HQ7KZ85 1726 aaKnown RBP28.84■■■□□ 2.21
CCDC17-205ENST00000479529 CDK11AQ9UQ88 783 aaPredicted RBP28.83■■■□□ 2.21
CCDC17-205ENST00000479529 ARHGEF11O15085 1522 aa28.81■■■□□ 2.2
CCDC17-205ENST00000479529 RRBP1Q9P2E9 1410 aaKnown RBP28.8■■■□□ 2.2
CCDC17-205ENST00000479529 UHRF1BP1LA0JNW5 1464 aa28.79■■■□□ 2.2
CCDC17-205ENST00000479529 ADCY10Q96PN6 1610 aa28.78■■■□□ 2.2
CCDC17-205ENST00000479529 TROQ12816 1431 aaPredicted RBP28.78■■■□□ 2.2
CCDC17-205ENST00000479529 CCNB3Q8WWL7 1395 aa28.76■■■□□ 2.19
CCDC17-205ENST00000479529 PLEKHD1A6NEE1 506 aa28.75■■■□□ 2.19
CCDC17-205ENST00000479529 KIF14Q15058 1648 aa28.72■■■□□ 2.19
CCDC17-205ENST00000479529 ZCCHC11Q5TAX3 1644 aaKnown RBP28.72■■■□□ 2.19
CCDC17-205ENST00000479529 KDM5BQ9UGL1 1544 aa28.71■■■□□ 2.19
CCDC17-205ENST00000479529 MYOM3Q5VTT5 1437 aa28.7■■■□□ 2.18
CCDC17-205ENST00000479529 RIMBP3CA6NJZ7 1639 aa28.69■■■□□ 2.18
CCDC17-205ENST00000479529 RIMBP3BA6NNM3 1639 aa28.69■■■□□ 2.18
CCDC17-205ENST00000479529 RIMBP3Q9UFD9 1639 aa28.69■■■□□ 2.18
CCDC17-205ENST00000479529 FGD6Q6ZV73 1430 aa28.68■■■□□ 2.18
CCDC17-205ENST00000479529 FAM50AQ14320 339 aaKnown RBP28.66■■■□□ 2.18
CCDC17-205ENST00000479529 ITGAEP38570 1179 aa28.62■■■□□ 2.17
CCDC17-205ENST00000479529 CYB5RLQ6IPT4 315 aa28.6■■■□□ 2.17
CCDC17-205ENST00000479529 KCNH8Q96L42 1107 aa28.56■■■□□ 2.16
CCDC17-205ENST00000479529 ABCC10Q5T3U5 1492 aa28.56■■■□□ 2.16
CCDC17-205ENST00000479529 PTPN23Q9H3S7 1636 aa28.55■■■□□ 2.16
CCDC17-205ENST00000479529 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
CCDC17-205ENST00000479529 MIA2Q96PC5 1412 aa28.51■■■□□ 2.15
CCDC17-205ENST00000479529 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.49■■■□□ 2.15
CCDC17-205ENST00000479529 CDC42BPAQ5VT25 1732 aa28.49■■■□□ 2.15
CCDC17-205ENST00000479529 TTC37Q6PGP7 1564 aa28.49■■■□□ 2.15
CCDC17-205ENST00000479529 ZNF644Q9H582 1327 aaPredicted RBP28.48■■■□□ 2.15
CCDC17-205ENST00000479529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.48■■■□□ 2.15
CCDC17-205ENST00000479529 ITSN2Q9NZM3 1697 aa28.48■■■□□ 2.15
CCDC17-205ENST00000479529 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
CCDC17-205ENST00000479529 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
CCDC17-205ENST00000479529 WDR7Q9Y4E6 1490 aa28.47■■■□□ 2.15
CCDC17-205ENST00000479529 ASXL2Q76L83 1435 aa28.47■■■□□ 2.15
CCDC17-205ENST00000479529 TCOF1Q13428 1488 aaKnown RBP28.46■■■□□ 2.15
CCDC17-205ENST00000479529 ZNF777Q9ULD5 760 aaPredicted RBP28.43■■■□□ 2.14
CCDC17-205ENST00000479529 PTPRKQ15262 1439 aa28.4■■■□□ 2.14
CCDC17-205ENST00000479529 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms