RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 ERCC6L2Q5T890 1561 aa35.05■■■■□ 3.2
PKP4-209ENST00000479398 KIAA0586Q9BVV6 1533 aa35.01■■■■□ 3.2
PKP4-209ENST00000479398 PRG4Q92954 1404 aaPredicted RBP35■■■■□ 3.19
PKP4-209ENST00000479398 RAPGEF2Q9Y4G8 1499 aa34.94■■■■□ 3.18
PKP4-209ENST00000479398 CHIC1Q5VXU3 224 aa34.81■■■■□ 3.16
PKP4-209ENST00000479398 CSRNP3Q8WYN3 585 aa34.78■■■■□ 3.16
PKP4-209ENST00000479398 PRXQ9BXM0 1461 aa34.77■■■■□ 3.16
PKP4-209ENST00000479398 IQGAP2Q13576 1575 aa34.74■■■■□ 3.15
PKP4-209ENST00000479398 TRHP20396 242 aaPredicted RBP34.71■■■■□ 3.15
PKP4-209ENST00000479398 EEA1Q15075 1411 aa34.68■■■■□ 3.14
PKP4-209ENST00000479398 CARMIL2Q6F5E8 1435 aa34.65■■■■□ 3.14
PKP4-209ENST00000479398 FAM9AQ8IZU1 332 aaPredicted RBP34.61■■■■□ 3.13
PKP4-209ENST00000479398 PTPRGP23470 1445 aa34.58■■■■□ 3.13
PKP4-209ENST00000479398 UGGT2Q9NYU1 1516 aa34.57■■■■□ 3.12
PKP4-209ENST00000479398 TNIKQ9UKE5 1360 aa34.57■■■■□ 3.12
PKP4-209ENST00000479398 CTTNBP2Q8WZ74 1663 aa34.56■■■■□ 3.12
PKP4-209ENST00000479398 DISP1Q96F81 1524 aa34.55■■■■□ 3.12
PKP4-209ENST00000479398 TTBK1Q5TCY1 1321 aaPredicted RBP34.54■■■■□ 3.12
PKP4-209ENST00000479398 NPM1P06748 294 aaKnown RBP eCLIP34.5■■■■□ 3.11
PKP4-209ENST00000479398 ADCY10Q96PN6 1610 aa34.44■■■■□ 3.1
PKP4-209ENST00000479398 KIAA0556O60303 1618 aa34.4■■■■□ 3.1
PKP4-209ENST00000479398 GOLGA3Q08378 1498 aa34.38■■■■□ 3.09
PKP4-209ENST00000479398 UACAQ9BZF9 1416 aa34.32■■■■□ 3.08
PKP4-209ENST00000479398 KIF21BO75037 1637 aa34.3■■■■□ 3.08
PKP4-209ENST00000479398 UHRF1BP1LA0JNW5 1464 aa34.28■■■■□ 3.08
PKP4-209ENST00000479398 MAPKBP1O60336 1514 aa34.26■■■■□ 3.08
PKP4-209ENST00000479398 ABCC2Q92887 1545 aa34.24■■■■□ 3.07
PKP4-209ENST00000479398 P3H3Q8IVL6 736 aa34.22■■■■□ 3.07
PKP4-209ENST00000479398 FAM69CQ0P6D2 419 aa34.17■■■■□ 3.06
PKP4-209ENST00000479398 ABCC10Q5T3U5 1492 aa34.17■■■■□ 3.06
PKP4-209ENST00000479398 EHMT2Q96KQ7 1210 aa34.17■■■■□ 3.06
PKP4-209ENST00000479398 KIF13AQ9H1H9 1805 aa34.17■■■■□ 3.06
PKP4-209ENST00000479398 RANGAP1P46060 587 aaPredicted RBP34.16■■■■□ 3.06
PKP4-209ENST00000479398 UBTFP17480 764 aaKnown RBP34.15■■■■□ 3.06
PKP4-209ENST00000479398 PLB1Q6P1J6 1458 aa34.14■■■■□ 3.06
PKP4-209ENST00000479398 KDM5BQ9UGL1 1544 aa34.11■■■■□ 3.05
PKP4-209ENST00000479398 SAMD9Q5K651 1589 aa34.11■■■■□ 3.05
PKP4-209ENST00000479398 ABCA8O94911 1581 aa34.07■■■■□ 3.05
PKP4-209ENST00000479398 ASXL2Q76L83 1435 aa34.06■■■■□ 3.04
PKP4-209ENST00000479398 DIP2BQ9P265 1576 aa34.05■■■■□ 3.04
PKP4-209ENST00000479398 ZCCHC11Q5TAX3 1644 aaKnown RBP34.01■■■■□ 3.04
PKP4-209ENST00000479398 FHOD3Q2V2M9 1422 aa33.94■■■■□ 3.02
PKP4-209ENST00000479398 EFCAB5A4FU69 1503 aa33.92■■■■□ 3.02
PKP4-209ENST00000479398 GLI2P10070 1586 aa33.87■■■■□ 3.01
PKP4-209ENST00000479398 ARID3CA6NKF2 412 aa33.86■■■■□ 3.01
PKP4-209ENST00000479398 EPRSP07814 1512 aaKnown RBP33.85■■■■□ 3.01
PKP4-209ENST00000479398 ATP10BO94823 1461 aa33.85■■■■□ 3.01
PKP4-209ENST00000479398 RAPGEF6Q8TEU7 1601 aa33.84■■■■□ 3.01
PKP4-209ENST00000479398 TSPOAP1O95153 1857 aa33.84■■■■□ 3.01
PKP4-209ENST00000479398 WDR7Q9Y4E6 1490 aa33.83■■■■□ 3.01
PKP4-209ENST00000479398 KCNH8Q96L42 1107 aa33.79■■■■□ 3
PKP4-209ENST00000479398 ARHGAP35Q9NRY4 1499 aa33.77■■■■□ 3
PKP4-209ENST00000479398 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.74■■■□□ 2.99
PKP4-209ENST00000479398 HNRNPUL2Q1KMD3 747 aaKnown RBP33.74■■■□□ 2.99
PKP4-209ENST00000479398 NUP153P49790 1475 aaKnown RBP33.73■■■□□ 2.99
PKP4-209ENST00000479398 MAP3K4Q9Y6R4 1608 aa33.68■■■□□ 2.98
PKP4-209ENST00000479398 FMN1Q68DA7 1419 aa33.66■■■□□ 2.98
PKP4-209ENST00000479398 PPRC1Q5VV67 1664 aaKnown RBP33.65■■■□□ 2.98
PKP4-209ENST00000479398 PLEKHD1A6NEE1 506 aa33.6■■■□□ 2.97
PKP4-209ENST00000479398 CD109Q6YHK3 1445 aa33.6■■■□□ 2.97
PKP4-209ENST00000479398 ATP1B4Q9UN42 357 aaPredicted RBP33.59■■■□□ 2.97
PKP4-209ENST00000479398 KDM6BO15054 1643 aa33.57■■■□□ 2.97
PKP4-209ENST00000479398 CFAP43Q8NDM7 1665 aa33.56■■■□□ 2.96
PKP4-209ENST00000479398 TEX14Q8IWB6 1497 aa33.56■■■□□ 2.96
PKP4-209ENST00000479398 MAGI3Q5TCQ9 1506 aa33.51■■■□□ 2.95
PKP4-209ENST00000479398 CLIP1P30622 1438 aa33.51■■■□□ 2.95
PKP4-209ENST00000479398 CDK13Q14004 1512 aaKnown RBP33.47■■■□□ 2.95
PKP4-209ENST00000479398 HECW1Q76N89 1606 aa33.46■■■□□ 2.95
PKP4-209ENST00000479398 ABCA9Q8IUA7 1624 aa33.45■■■□□ 2.95
PKP4-209ENST00000479398 LOC105371045A0A1W2PR82 267 aa33.43■■■□□ 2.94
PKP4-209ENST00000479398 COL17A1Q9UMD9 1497 aaPredicted RBP33.43■■■□□ 2.94
PKP4-209ENST00000479398 CDK11AQ9UQ88 783 aaPredicted RBP33.4■■■□□ 2.94
PKP4-209ENST00000479398 CASKIN1Q8WXD9 1431 aa33.38■■■□□ 2.93
PKP4-209ENST00000479398 LRRIQ1Q96JM4 1722 aa33.31■■■□□ 2.92
PKP4-209ENST00000479398 PCF11O94913 1555 aaKnown RBP33.3■■■□□ 2.92
PKP4-209ENST00000479398 CEP162Q5TB80 1403 aa33.29■■■□□ 2.92
PKP4-209ENST00000479398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.29■■■□□ 2.925e-10■■■■□ 24.2
PKP4-209ENST00000479398 PHLDB1Q86UU1 1377 aa33.29■■■□□ 2.92
PKP4-209ENST00000479398 FYCO1Q9BQS8 1478 aa33.25■■■□□ 2.91
PKP4-209ENST00000479398 CCDC18Q5T9S5 1454 aa33.24■■■□□ 2.91
PKP4-209ENST00000479398 ARAP3Q8WWN8 1544 aa33.23■■■□□ 2.91
PKP4-209ENST00000479398 TROQ12816 1431 aaPredicted RBP33.22■■■□□ 2.91
PKP4-209ENST00000479398 NEO1Q92859 1461 aa33.22■■■□□ 2.91
PKP4-209ENST00000479398 TTC37Q6PGP7 1564 aa33.2■■■□□ 2.91
PKP4-209ENST00000479398 PLCH2O75038 1416 aa33.14■■■□□ 2.9
PKP4-209ENST00000479398 FANCAO15360 1455 aa33.12■■■□□ 2.89
PKP4-209ENST00000479398 AKNAQ7Z591 1439 aa33.11■■■□□ 2.89
PKP4-209ENST00000479398 KIF14Q15058 1648 aa33.11■■■□□ 2.89
PKP4-209ENST00000479398 RAPGEF3O95398 923 aa33.11■■■□□ 2.89
PKP4-209ENST00000479398 AEBP2Q6ZN18 517 aaPredicted RBP33.1■■■□□ 2.89
PKP4-209ENST00000479398 EFCAB2Q5VUJ9 269 aa33.06■■■□□ 2.88
PKP4-209ENST00000479398 CFAP74Q9C0B2 1584 aa33.05■■■□□ 2.88
PKP4-209ENST00000479398 MYO5CQ9NQX4 1742 aa33.03■■■□□ 2.88
PKP4-209ENST00000479398 KDM4FA0A1W2PPD8 638 aa33.01■■■□□ 2.87
PKP4-209ENST00000479398 DENND4BO75064 1496 aaPredicted RBP33■■■□□ 2.87
PKP4-209ENST00000479398 FRMPD1Q5SYB0 1578 aa32.94■■■□□ 2.86
PKP4-209ENST00000479398 SCAPERQ9BY12 1400 aa32.94■■■□□ 2.86
PKP4-209ENST00000479398 ADGRL1O94910 1474 aa32.93■■■□□ 2.86
PKP4-209ENST00000479398 ARHGAP5Q13017 1502 aa32.92■■■□□ 2.86
PKP4-209ENST00000479398 MTUS2Q5JR59 1369 aa32.92■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 287.5 ms