RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 SHROOM2Q13796 1616 aa10.33□□□□□ -0.76
CNOT10-215ENST00000479397 TSPOAP1O95153 1857 aa10.32□□□□□ -0.76
CNOT10-215ENST00000479397 KDM6BO15054 1643 aa10.32□□□□□ -0.76
CNOT10-215ENST00000479397 ABCA5Q8WWZ7 1642 aa10.31□□□□□ -0.76
CNOT10-215ENST00000479397 CUX1P39880 1505 aa10.28□□□□□ -0.76
CNOT10-215ENST00000479397 KDM4FA0A1W2PPD8 638 aa10.28□□□□□ -0.76
CNOT10-215ENST00000479397 GRIN2AQ12879 1464 aa10.28□□□□□ -0.76
CNOT10-215ENST00000479397 DIP2BQ9P265 1576 aa10.26□□□□□ -0.77
CNOT10-215ENST00000479397 ABCC10Q5T3U5 1492 aa10.26□□□□□ -0.77
CNOT10-215ENST00000479397 ADAMTS12P58397 1594 aa10.26□□□□□ -0.77
CNOT10-215ENST00000479397 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
CNOT10-215ENST00000479397 NUP160Q12769 1436 aa10.24□□□□□ -0.77
CNOT10-215ENST00000479397 CNKSR2Q8WXI2 1034 aa10.24□□□□□ -0.77
CNOT10-215ENST00000479397 ABCA10Q8WWZ4 1543 aa10.23□□□□□ -0.77
CNOT10-215ENST00000479397 FAM69CQ0P6D2 419 aa10.23□□□□□ -0.77
CNOT10-215ENST00000479397 NPM1P06748 294 aaKnown RBP eCLIP10.2□□□□□ -0.78
CNOT10-215ENST00000479397 HECW2Q9P2P5 1572 aa10.19□□□□□ -0.78
CNOT10-215ENST00000479397 ADCY10Q96PN6 1610 aa10.18□□□□□ -0.78
CNOT10-215ENST00000479397 ADGRL1O94910 1474 aa10.17□□□□□ -0.78
CNOT10-215ENST00000479397 PRG4Q92954 1404 aaPredicted RBP10.16□□□□□ -0.78
CNOT10-215ENST00000479397 FHAD1B1AJZ9 1412 aa10.16□□□□□ -0.78
CNOT10-215ENST00000479397 HOXD11P31277 338 aaPredicted RBP10.15□□□□□ -0.78
CNOT10-215ENST00000479397 ERICH3Q5RHP9 1530 aa10.13□□□□□ -0.79
CNOT10-215ENST00000479397 RUSC2Q8N2Y8 1516 aa10.12□□□□□ -0.79
CNOT10-215ENST00000479397 PPRC1Q5VV67 1664 aaKnown RBP10.12□□□□□ -0.79
CNOT10-215ENST00000479397 RNF216Q9NWF9 866 aaPredicted RBP10.11□□□□□ -0.79
CNOT10-215ENST00000479397 WRNQ14191 1432 aaPredicted RBP eCLIP10.1□□□□□ -0.79
CNOT10-215ENST00000479397 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
CNOT10-215ENST00000479397 BIVM-ERCC5R4GMW8 1640 aa10.1□□□□□ -0.79
CNOT10-215ENST00000479397 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
CNOT10-215ENST00000479397 FBXO41Q8TF61 875 aa10.09□□□□□ -0.79
CNOT10-215ENST00000479397 TOP2BQ02880 1626 aa10.07□□□□□ -0.8
CNOT10-215ENST00000479397 CUL7Q14999 1698 aa10.06□□□□□ -0.8
CNOT10-215ENST00000479397 GLI2P10070 1586 aa10.05□□□□□ -0.8
CNOT10-215ENST00000479397 DCAF8L1A6NGE4 600 aa10.03□□□□□ -0.8
CNOT10-215ENST00000479397 MAP3K4Q9Y6R4 1608 aa10.03□□□□□ -0.8
CNOT10-215ENST00000479397 PLB1Q6P1J6 1458 aa10□□□□□ -0.81
CNOT10-215ENST00000479397 TEX14Q8IWB6 1497 aa10□□□□□ -0.81
CNOT10-215ENST00000479397 ABCC2Q92887 1545 aa9.99□□□□□ -0.81
CNOT10-215ENST00000479397 NPM3O75607 178 aaKnown RBP9.99□□□□□ -0.81
CNOT10-215ENST00000479397 ASXL2Q76L83 1435 aa9.98□□□□□ -0.81
CNOT10-215ENST00000479397 LMTK3Q96Q04 1460 aa9.98□□□□□ -0.81
CNOT10-215ENST00000479397 KIAA0586Q9BVV6 1533 aa9.97□□□□□ -0.81
CNOT10-215ENST00000479397 PTPRGP23470 1445 aa9.95□□□□□ -0.82
CNOT10-215ENST00000479397 COL17A1Q9UMD9 1497 aaPredicted RBP9.95□□□□□ -0.82
CNOT10-215ENST00000479397 KIF21BO75037 1637 aa9.94□□□□□ -0.82
CNOT10-215ENST00000479397 KCNA4P22459 653 aa9.94□□□□□ -0.82
CNOT10-215ENST00000479397 ZCCHC11Q5TAX3 1644 aaKnown RBP9.93□□□□□ -0.82
CNOT10-215ENST00000479397 EPRSP07814 1512 aaKnown RBP9.92□□□□□ -0.82
CNOT10-215ENST00000479397 UHRF1BP1LA0JNW5 1464 aa9.92□□□□□ -0.82
CNOT10-215ENST00000479397 CARMIL2Q6F5E8 1435 aa9.91□□□□□ -0.82
CNOT10-215ENST00000479397 CFAP43Q8NDM7 1665 aa9.91□□□□□ -0.82
CNOT10-215ENST00000479397 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
CNOT10-215ENST00000479397 TTBK1Q5TCY1 1321 aaPredicted RBP9.88□□□□□ -0.83
CNOT10-215ENST00000479397 IQGAP2Q13576 1575 aa9.88□□□□□ -0.83
CNOT10-215ENST00000479397 KDM5BQ9UGL1 1544 aa9.87□□□□□ -0.83
CNOT10-215ENST00000479397 ADAMTSL3P82987 1691 aa9.87□□□□□ -0.83
CNOT10-215ENST00000479397 UACAQ9BZF9 1416 aa9.87□□□□□ -0.83
CNOT10-215ENST00000479397 SOCS7O14512 581 aa9.86□□□□□ -0.83
CNOT10-215ENST00000479397 PCF11O94913 1555 aaKnown RBP9.86□□□□□ -0.83
CNOT10-215ENST00000479397 PTPRMP28827 1452 aa9.84□□□□□ -0.83
CNOT10-215ENST00000479397 MAGI3Q5TCQ9 1506 aa9.83□□□□□ -0.84
CNOT10-215ENST00000479397 WDR7Q9Y4E6 1490 aa9.83□□□□□ -0.84
CNOT10-215ENST00000479397 BCORL1Q5H9F3 1711 aa9.82□□□□□ -0.84
CNOT10-215ENST00000479397 DISP3Q9P2K9 1392 aa9.81□□□□□ -0.84
CNOT10-215ENST00000479397 KIF27Q86VH2 1401 aa9.81□□□□□ -0.84
CNOT10-215ENST00000479397 MADDQ8WXG6 1647 aa9.8□□□□□ -0.84
CNOT10-215ENST00000479397 CD109Q6YHK3 1445 aa9.8□□□□□ -0.84
CNOT10-215ENST00000479397 IGF1RP08069 1367 aa9.79□□□□□ -0.84
CNOT10-215ENST00000479397 DISP1Q96F81 1524 aa9.79□□□□□ -0.84
CNOT10-215ENST00000479397 RIMS1Q86UR5 1692 aaKnown RBP9.79□□□□□ -0.84
CNOT10-215ENST00000479397 ARAP3Q8WWN8 1544 aa9.78□□□□□ -0.84
CNOT10-215ENST00000479397 ILDR2Q71H61 639 aa9.78□□□□□ -0.84
CNOT10-215ENST00000479397 SPATA31D1Q6ZQQ2 1576 aa9.78□□□□□ -0.84
CNOT10-215ENST00000479397 KIAA0556O60303 1618 aa9.78□□□□□ -0.84
CNOT10-215ENST00000479397 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
CNOT10-215ENST00000479397 UGGT2Q9NYU1 1516 aa9.76□□□□□ -0.85
CNOT10-215ENST00000479397 CTTNBP2Q8WZ74 1663 aa9.75□□□□□ -0.85
CNOT10-215ENST00000479397 CERKQ8TCT0 537 aa9.75□□□□□ -0.85
CNOT10-215ENST00000479397 CARMIL1Q5VZK9 1371 aa9.75□□□□□ -0.85
CNOT10-215ENST00000479397 KCNH8Q96L42 1107 aa9.71□□□□□ -0.86
CNOT10-215ENST00000479397 PHLDB1Q86UU1 1377 aa9.71□□□□□ -0.86
CNOT10-215ENST00000479397 ABCA9Q8IUA7 1624 aa9.71□□□□□ -0.86
CNOT10-215ENST00000479397 FER1L4A9Z1Z3 1794 aa9.7□□□□□ -0.86
CNOT10-215ENST00000479397 CACNB1Q02641 598 aaPredicted RBP9.7□□□□□ -0.86
CNOT10-215ENST00000479397 ABCA8O94911 1581 aa9.7□□□□□ -0.86
CNOT10-215ENST00000479397 PREX1Q8TCU6 1659 aa9.7□□□□□ -0.86
CNOT10-215ENST00000479397 ARID4BQ4LE39 1312 aaPredicted RBP9.69□□□□□ -0.86
CNOT10-215ENST00000479397 FRMPD1Q5SYB0 1578 aa9.67□□□□□ -0.86
CNOT10-215ENST00000479397 ARHGEF40Q8TER5 1519 aa9.67□□□□□ -0.86
CNOT10-215ENST00000479397 SUPT5HO00267 1087 aaKnown RBP9.67□□□□□ -0.86
CNOT10-215ENST00000479397 HSPA2P54652 639 aa9.67□□□□□ -0.86
CNOT10-215ENST00000479397 RICTORQ6R327 1708 aa9.67□□□□□ -0.86
CNOT10-215ENST00000479397 SETD1BQ9UPS6 1966 aaKnown RBP9.66□□□□□ -0.86
CNOT10-215ENST00000479397 GOLGA3Q08378 1498 aa9.66□□□□□ -0.86
CNOT10-215ENST00000479397 NEO1Q92859 1461 aa9.66□□□□□ -0.86
CNOT10-215ENST00000479397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.66□□□□□ -0.86
CNOT10-215ENST00000479397 STRCQ7RTU9 1775 aa9.65□□□□□ -0.86
CNOT10-215ENST00000479397 RAPGEF2Q9Y4G8 1499 aa9.65□□□□□ -0.87
CNOT10-215ENST00000479397 POGZQ7Z3K3 1410 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms