RNA–Protein interactions for RNA: ENST00000479219.5

USP30-206, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 1 (best)

Gene USP30, Length 2,906 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-206ENST00000479219 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
USP30-206ENST00000479219 CCNB3Q8WWL7 1395 aa12.55□□□□□ -0.4
USP30-206ENST00000479219 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
USP30-206ENST00000479219 NEUROD1Q13562 356 aa12.54□□□□□ -0.4
USP30-206ENST00000479219 KANK4Q5T7N3 995 aaPredicted RBP12.54□□□□□ -0.4
USP30-206ENST00000479219 PDS5BQ9NTI5 1447 aa12.53□□□□□ -0.4
USP30-206ENST00000479219 AQRO60306 1485 aaKnown RBP eCLIP12.53□□□□□ -0.4
USP30-206ENST00000479219 NESP48681 1621 aa12.52□□□□□ -0.4
USP30-206ENST00000479219 ABCA5Q8WWZ7 1642 aa12.52□□□□□ -0.41
USP30-206ENST00000479219 FYCO1Q9BQS8 1478 aa12.52□□□□□ -0.41
USP30-206ENST00000479219 RAD54L2Q9Y4B4 1467 aa12.51□□□□□ -0.41
USP30-206ENST00000479219 LRRC9Q6ZRR7 1453 aa12.51□□□□□ -0.41
USP30-206ENST00000479219 PCF11O94913 1555 aaKnown RBP12.5□□□□□ -0.41
USP30-206ENST00000479219 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
USP30-206ENST00000479219 DHX57Q6P158 1386 aaKnown RBP12.49□□□□□ -0.41
USP30-206ENST00000479219 GTF3C3Q9Y5Q9 886 aa12.48□□□□□ -0.41
USP30-206ENST00000479219 KIF21AQ7Z4S6 1674 aa12.47□□□□□ -0.41
USP30-206ENST00000479219 CASKIN1Q8WXD9 1431 aa12.47□□□□□ -0.41
USP30-206ENST00000479219 FMN1Q68DA7 1419 aa12.46□□□□□ -0.41
USP30-206ENST00000479219 SAMD9Q5K651 1589 aa12.44□□□□□ -0.42
USP30-206ENST00000479219 THOC2Q8NI27 1593 aaKnown RBP12.44□□□□□ -0.42
USP30-206ENST00000479219 GAPVD1Q14C86 1478 aa12.44□□□□□ -0.42
USP30-206ENST00000479219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
USP30-206ENST00000479219 TARBP1Q13395 1621 aaKnown RBP12.41□□□□□ -0.42
USP30-206ENST00000479219 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
USP30-206ENST00000479219 PBRM1Q86U86 1689 aa12.39□□□□□ -0.43
USP30-206ENST00000479219 SNAPC4Q5SXM2 1469 aa12.38□□□□□ -0.43
USP30-206ENST00000479219 PHLDB1Q86UU1 1377 aa12.38□□□□□ -0.43
USP30-206ENST00000479219 SETD5Q9C0A6 1442 aa12.38□□□□□ -0.43
USP30-206ENST00000479219 RAB3GAP2Q9H2M9 1393 aa12.36□□□□□ -0.43
USP30-206ENST00000479219 TDRD9Q8NDG6 1382 aaKnown RBP12.34□□□□□ -0.43
USP30-206ENST00000479219 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
USP30-206ENST00000479219 SUPT6HQ7KZ85 1726 aaKnown RBP12.33□□□□□ -0.44
USP30-206ENST00000479219 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
USP30-206ENST00000479219 CCDC18Q5T9S5 1454 aa12.32□□□□□ -0.44
USP30-206ENST00000479219 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
USP30-206ENST00000479219 ADAMTS12P58397 1594 aa12.32□□□□□ -0.44
USP30-206ENST00000479219 MAPKBP1O60336 1514 aa12.31□□□□□ -0.44
USP30-206ENST00000479219 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
USP30-206ENST00000479219 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
USP30-206ENST00000479219 IQGAP2Q13576 1575 aa12.3□□□□□ -0.44
USP30-206ENST00000479219 FGD6Q6ZV73 1430 aa12.3□□□□□ -0.44
USP30-206ENST00000479219 HECW1Q76N89 1606 aa12.3□□□□□ -0.44
USP30-206ENST00000479219 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
USP30-206ENST00000479219 ITGAEP38570 1179 aa12.29□□□□□ -0.44
USP30-206ENST00000479219 TIMELESSQ9UNS1 1208 aa12.29□□□□□ -0.44
USP30-206ENST00000479219 FAM50AQ14320 339 aaKnown RBP12.29□□□□□ -0.44
USP30-206ENST00000479219 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
USP30-206ENST00000479219 IFT140Q96RY7 1462 aa12.27□□□□□ -0.44
USP30-206ENST00000479219 WDR62O43379 1518 aa12.26□□□□□ -0.45
USP30-206ENST00000479219 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
USP30-206ENST00000479219 MIER1Q8N108 512 aa12.25□□□□□ -0.45
USP30-206ENST00000479219 NCOA2Q15596 1464 aa12.25□□□□□ -0.45
USP30-206ENST00000479219 ARHGEF11O15085 1522 aa12.24□□□□□ -0.45
USP30-206ENST00000479219 UGGT2Q9NYU1 1516 aa12.24□□□□□ -0.45
USP30-206ENST00000479219 HFM1A2PYH4 1435 aa12.23□□□□□ -0.45
USP30-206ENST00000479219 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
USP30-206ENST00000479219 TCOF1Q13428 1488 aaKnown RBP12.2□□□□□ -0.46
USP30-206ENST00000479219 UACAQ9BZF9 1416 aa12.19□□□□□ -0.46
USP30-206ENST00000479219 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
USP30-206ENST00000479219 AKNAQ7Z591 1439 aa12.18□□□□□ -0.46
USP30-206ENST00000479219 EPRSP07814 1512 aaKnown RBP12.18□□□□□ -0.46
USP30-206ENST00000479219 KIAA0586Q9BVV6 1533 aa12.18□□□□□ -0.46
USP30-206ENST00000479219 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
USP30-206ENST00000479219 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
USP30-206ENST00000479219 KIAA0556O60303 1618 aa12.16□□□□□ -0.46
USP30-206ENST00000479219 YTHDC1Q96MU7 727 aaKnown RBP12.15□□□□□ -0.46
USP30-206ENST00000479219 MAGI3Q5TCQ9 1506 aa12.15□□□□□ -0.46
USP30-206ENST00000479219 NAIPQ13075 1403 aa12.14□□□□□ -0.47
USP30-206ENST00000479219 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
USP30-206ENST00000479219 GRIN2AQ12879 1464 aa12.13□□□□□ -0.47
USP30-206ENST00000479219 ZNF608Q9ULD9 1512 aaPredicted RBP12.12□□□□□ -0.47
USP30-206ENST00000479219 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
USP30-206ENST00000479219 PTPRKQ15262 1439 aa12.11□□□□□ -0.47
USP30-206ENST00000479219 DISP1Q96F81 1524 aa12.1□□□□□ -0.47
USP30-206ENST00000479219 ERCC6Q03468 1493 aa12.1□□□□□ -0.47
USP30-206ENST00000479219 TONSLQ96HA7 1378 aa12.09□□□□□ -0.47
USP30-206ENST00000479219 CDK13Q14004 1512 aaKnown RBP12.09□□□□□ -0.47
USP30-206ENST00000479219 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
USP30-206ENST00000479219 PPP1R15AO75807 674 aaPredicted RBP12.08□□□□□ -0.48
USP30-206ENST00000479219 SYNJ2O15056 1496 aa12.08□□□□□ -0.48
USP30-206ENST00000479219 ITSN2Q9NZM3 1697 aa12.07□□□□□ -0.48
USP30-206ENST00000479219 SIN3AQ96ST3 1273 aa12.07□□□□□ -0.48
USP30-206ENST00000479219 CDK11AQ9UQ88 783 aaPredicted RBP12.07□□□□□ -0.48
USP30-206ENST00000479219 DNMT1P26358 1616 aaKnown RBP12.06□□□□□ -0.48
USP30-206ENST00000479219 ROCK1Q13464 1354 aa12.06□□□□□ -0.48
USP30-206ENST00000479219 NUP153P49790 1475 aaKnown RBP12.05□□□□□ -0.48
USP30-206ENST00000479219 ADCY10Q96PN6 1610 aa12.05□□□□□ -0.48
USP30-206ENST00000479219 CARMIL2Q6F5E8 1435 aa12.03□□□□□ -0.48
USP30-206ENST00000479219 CEP170Q5SW79 1584 aa12.03□□□□□ -0.48
USP30-206ENST00000479219 DAPK1P53355 1430 aa12.01□□□□□ -0.49
USP30-206ENST00000479219 NUP160Q12769 1436 aa12.01□□□□□ -0.49
USP30-206ENST00000479219 ADGBQ8N7X0 1667 aa12.01□□□□□ -0.49
USP30-206ENST00000479219 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
USP30-206ENST00000479219 CHMP7Q8WUX9 453 aaPredicted RBP11.98□□□□□ -0.49
USP30-206ENST00000479219 CROCC2H7BZ55 1655 aa11.98□□□□□ -0.49
USP30-206ENST00000479219 KDM5BQ9UGL1 1544 aa11.98□□□□□ -0.49
USP30-206ENST00000479219 KDM6BO15054 1643 aa11.96□□□□□ -0.49
USP30-206ENST00000479219 RRP7BPQ9NSQ0 103 aa11.96□□□□□ -0.49
USP30-206ENST00000479219 ABCC5O15440 1437 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms